Rhagoletis zephyria (snowberry fruit fly): 108361957
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Entry
108361957 CDS
T08513
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03013
Nucleocytoplasmic transport
rze03015
mRNA surveillance pathway
rze03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108361957
09122 Translation
03013 Nucleocytoplasmic transport
108361957
03015 mRNA surveillance pathway
108361957
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rze03019
]
108361957
03041 Spliceosome [BR:
rze03041
]
108361957
Messenger RNA biogenesis [BR:
rze03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
108361957
Spliceosome [BR:
rze03041
]
Common components
Common spliceosomal components
Cap binding complex
108361957
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
dNK
AATF-Che1
TMF_DNA_bd
Motif
Other DBs
NCBI-GeneID:
108361957
NCBI-ProteinID:
XP_017470240
LinkDB
All DBs
Position
Unknown
AA seq
801 aa
AA seq
DB search
MNRRRPHDGDEEGYDHRNRKRRRVSENQEIEDRLESLILRVGERSTSSVESNLEGLVSVL
EADLGTFRLKILRILSDCAIKMPEKCTIYTTLVGLLNAKNYKFGGEFVDHMVKTFKEALK
MCWWDAARYSLRFLADLVNCHVISATSLLQLLDTMIDVSNEDTVPQVRRDWFVFSVLSTL
PWVGRDLYEKKESSLESLLLRIEVYLNKRSKKHHNALRVWSVDAPHPQEEYLDCLWAQIR
KLRQDNWAEKHIPRPYLAFDSILCEALQHNLPPIVPPSHHESYDYPMPWVVYRMFDYTDC
PDGPNLPGAHSIERFLIEEHLHHIIETHRLERKDCAAQLLAFPYKNKIPLEYCIVEVVFA
EIFHMPTPRYLEIVYGSILIELCKLQPATLPQVLAQATEILFMRIDSMNTSCFDRFVNWF
SYHLSNFKFTWSWEEWDSCLLLDPEHPRPKFIQEVLHKCLRLSYHQRIVEMMPEAYAKLI
PVAPQPNYKYASEDAASLAGTQVAHQLVVAIRQKCTPDEVINILKELPNSGENADQEMSE
TSFNPLKIDVFVQTLLNLGAKSFSHSFAAISKFHLVFKALAESEEAQICILHNVYELWQN
HQQMMVVIIDKLLKLQIVDCSAVATWIFSKEMTGEFTKMYLWEILHLTIKKMNKHVIKLS
SELTVAKEKLAKVDSSSSESEDEATPKRKKPINNVDKPTEEVVERMEEKLEAANVDQKRL
FLIVFQRFIMILSEHLVRSDTDGRDPDTDWYRWTIGRLQQVFLMHHEQVQKYSSTLETLL
FTSDLDSHILEVFHQFVALRA
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgcagacgtccgcatgatggcgatgaagagggctacgatcatcgcaatcgaaaa
cgtaggcgcgtttctgaaaatcaggaaattgaagatcgtttggagtcactaattttacgc
gtcggtgaacgtagcacctcttcggtagaatcgaatttggaaggtttagtttccgttttg
gaggcagacttgggcacttttcgtctaaaaattctacgtattctctcggattgtgcaata
aaaatgccggaaaagtgtaccatttacacaaccttagtgggcttattaaatgcaaaaaac
tacaaatttggcggtgagttcgtagaccacatggtgaagacatttaaagaagccttgaaa
atgtgctggtgggatgctgcacgttactcgctccgttttcttgctgatctagtgaattgt
cacgtcatctcagcaacaagtcttctgcagcttctagacacaatgatcgatgtttctaac
gaagatacagtaccacaagtgcgtcgtgactggttcgttttttcagtgctctccacgtta
ccatgggtaggtcgcgacttgtatgaaaagaaagagtcgtcgttagaatcattgctgttg
cgcattgaagtttatttaaacaagcgttcaaagaaacaccacaatgctctacgtgtgtgg
tcggtcgatgcaccacatccgcaagaggaatacttggattgcttatgggcgcaaatacgt
aagttgcgtcaagataattgggctgaaaaacacattccacgtccttacctggcctttgat
tcgattttatgtgaagcactgcaacataatttgccacccattgtgccaccatcacatcat
gagtcatacgattatccaatgccttgggtggtttatcgcatgtttgattatactgattgc
cccgatggtcccaatttgccaggtgcgcattccattgagcgcttcttaatcgaagagcac
ctgcaccacatcatcgaaacgcatcgtttggaacggaaagattgtgcagcacaactgcta
gcgttcccttacaaaaacaaaataccgctcgaatactgcatcgtagaggttgtatttgca
gaaatattccatatgccgacaccacgttatttggaaatcgtttatggttcaatacttatt
gaattgtgtaaattacaaccggcaacattgccgcaagtgctcgctcaagcaactgaaatt
ctattcatgcgcatagattccatgaatacttcttgtttcgaccgcttcgttaattggttt
tcttatcatttgagcaacttcaaattcacttggtcgtgggaagagtgggatagttgttta
ctattagacccagaacatccacgccccaaatttatacaagaagtattgcataagtgttta
agattatcttatcatcaacgcattgtggaaatgatgcctgaggcttatgctaagcttata
cctgttgcaccgcaacccaactacaaatatgcttccgaagatgcagcgtcgttggcaggc
acccaggtggcacatcaattggtggtggcaattcgacaaaagtgcacacccgatgaggtg
atcaatattctaaaggagttgccgaattccggcgaaaatgcggatcaggaaatgtcggag
acatcattcaatccactaaaaatcgatgtgttcgtgcagacattattgaatttgggcgcc
aaatcgttttcgcatagtttcgctgcaatatcgaaattccatttggtgtttaaggccctc
gccgaatccgaggaggcgcaaatttgcatacttcacaacgtctacgaattatggcagaat
catcaacaaatgatggtggtcattatagataaattattaaaattacaaattgttgattgt
tctgctgtcgctacgtggatattttccaaagagatgaccggcgagttcaccaaaatgtac
ttgtgggaaatactccatttgaccataaagaaaatgaataaacatgttattaaattgagt
agcgaattaactgttgcgaaggagaagttggctaaagtggactcatcgtccagcgaatcg
gaggatgaagcaacgcccaagcgtaagaagcccatcaataacgtagataaaccaactgaa
gaggtagtcgaacgtatggaagagaaattggaagcagcaaatgtggatcaaaaacgttta
ttcttgattgttttccaacgattcataatgatattgtccgaacatttggtgcgttctgac
acagatgggcgtgaccctgataccgattggtatcgctggaccataggacgtctgcagcaa
gtgttcctaatgcaccacgaacaagtgcaaaagtacagcagcacgttggagacgttgctc
ttcacctcggacttggactcacacatactggaagtgttccatcagtttgtagccttaagg
gcgtaa
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