Rhagoletis zephyria (snowberry fruit fly): 108362985
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Entry
108362985 CDS
T08513
Name
(RefSeq) DNA damage-binding protein 1
KO
K10610
DNA damage-binding protein 1
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03420
Nucleotide excision repair
rze04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108362985
09124 Replication and repair
03420 Nucleotide excision repair
108362985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rze04121
]
108362985
03400 DNA repair and recombination proteins [BR:
rze03400
]
108362985
Ubiquitin system [BR:
rze04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
108362985
DNA repair and recombination proteins [BR:
rze03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
108362985
TCR (transcription coupled repair) factors
Cul4-CSA complex
108362985
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_RSE1_1st
Lgl_C
Motif
Other DBs
NCBI-GeneID:
108362985
NCBI-ProteinID:
XP_017471647
LinkDB
All DBs
Position
Unknown
AA seq
1142 aa
AA seq
DB search
MSHHYVVTAQKPTAVVSCVTGNFTSPTDLNLIIARNSQLEIDLVTPEGLRPLKEVNINGQ
ISVMRHFRPQDSKKDLLFILTLRYNVMILECRMIGDQISVITKAHGNVADQVSIPTEGGV
IAVIDPKAPVIGMCLYMGLFTIIPLDKETSELKATNLRMDELNVYDVEFLYGCINPTIIV
IHKDVDGRHVKTHEINLRDKEFMKIAWKQDNVETEATMLIPVPTPLGGAIVIGRESIVYH
DGNSYHAVAPSTFKQSTINCYARVDSKGQRYLLGNMYGQLFMLFLETVDNGKGGVSVKEI
KVELLGEISIPECITYLDNGFLFIGSKHGDSQLVRLSTTANENGSYVIPMENFTSLAPIL
DLGVVDLDRQGQGQIITCSGSFKDGSLRIIRIGIGIQEHACIDLPGIKGMWSLKVGIDDS
IFENTLVLAFVGHTRILTLTGEEVEETEIPGFISDQQTFHCANVDYDQIIQVTPLTVRLV
KSSTKSLVGEWQPPDDKRIGVVSCNASQIVVASACNVYYIEIENCCLAEKSHRALEYEVA
CLDITPLEEGNSKANLVAVGLWTDISAVVLSLPKLGTMYTEKLGGEIIPRSILMTTFESI
HYLLCALGDGSMFYFILSKADGRLSEKKKVTLGTQPTTLRTFKSFATTNVFACSDRPTVI
YSSNHKLVFSNVNLKEVNHMCSLNAQSYPDSLALATKNSVILGTIDEIQKLHIRTVPLGE
GPRRIAYQESSQTFGVATLRVDVQGRGGPKPTRPSASTQAQNITYASNIVPKPGGGNTAT
TNAEVGQELDINNLLIIDQNTFEVLHAHQFMPSESIISLMSARLGDDPNTYYVVSTALIY
ADEPEPKVGRIIIFHYNEGKLTQVAETKIDGSCHSLVEFNGKVLAGINSFVRLYEWTNEK
ELRMECNIQNNISVLYLKAKGDFILVGDLMRSMTLLQHKQMEGIFVEISRDCDPKWMRAV
EILDDDTFLGSETYGNLFVCQKDSAATTDEERQLLPEVARFHLGDVVNVFRHGSLVMQNV
GERTTPNQGCVLYGTVNGAIGIVTQIPQEFYDFLHSLEERLTNTIKSVGKIDHSYYRSYQ
TTQKTEPCENFIDGDLIESFLDLSRDKMKETVMGLEITLNGEKKEADVDDVIKIVEDLTR
MH
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgtcacatcattacgtggttacggcgcagaagccgacagcggtcgttagttgcgtgacc
ggcaactttacatcgccaaccgatttaaatttgatcatcgctcgcaacagtcagttggaa
atagatttggtaacaccagaaggcttgcgtccgttgaaggaagtaaatataaatggccag
atatcagtcatgcggcatttccgtcctcaggacagtaaaaaagatttgctctttatactt
acgttgcgatataatgttatgattttggaatgtcgaatgattggtgaccaaatcagtgtc
ataacaaaagcgcatggcaacgtggcggatcaggtaagcatacctaccgaaggtggtgta
atagccgtaattgatccaaaagcacccgttatcggaatgtgcttatacatgggactgttc
accatcattcctttggataaggagacaagcgaattgaaggcgactaatttacgcatggac
gagctgaatgtttatgatgtagaatttttatatggttgcataaatccaactatcatcgtt
atacacaaagatgttgatggacgtcatgttaagacgcacgaaatcaatttacgtgacaaa
gagtttatgaagattgcctggaagcaggataatgtggagactgaagcaacaatgctgata
ccagtgccaacaccattgggtggtgccattgtaattggtcgggaatctattgtttaccac
gatggaaatagctaccatgctgtagcaccttctacatttaaacaaagtactattaactgc
tacgcacgagtagatagcaagggccaacgctatttgctgggcaatatgtatggccagctg
tttatgttattcttggagactgtagacaatggtaaaggcggagtttccgttaaagaaata
aaagtggagttgctaggtgaaatatccataccggagtgtataacatatttggacaacgga
tttcttttcattggctcgaagcacggagactctcagttagtgcgcttgagcacaactgcg
aacgaaaatggctcttacgttattccgatggagaatttcaccagcctagcgcctattctt
gatttaggtgtggtagatttagatcggcagggccaaggacaaattataacatgctctggt
agttttaaagatggatcacttcgaattattagaatcggcattggcattcaggagcacgcc
tgtattgatttaccaggtataaagggtatgtggtcacttaaagtaggtatagacgatagt
atttttgaaaacacattggtgctggcctttgtgggtcacacacgaattttgacgctgact
ggtgaggaagttgaagaaacagaaataccaggctttattagtgatcagcaaacttttcat
tgtgccaatgttgactacgatcagattatacaagtaacaccactcacggtacgtctagta
aaaagtagtactaaaagtttggtaggtgaatggcagccgccagatgataaacgtattggt
gttgtgtcatgcaacgcatcacagattgttgttgcctcggcatgcaatgtctattacatt
gaaatcgaaaattgctgcttagctgaaaagtctcacagggcattggaatatgaggtcgct
tgtttggacattacgccactagaggagggcaacagcaaagctaatctcgtcgcagttggc
ttatggacagatatatctgctgtggttctatcactgccgaaactgggaactatgtacacc
gaaaagttgggaggcgaaattataccacgctctattttgatgaccaccttcgaaagcata
cattatttgctatgtgcattgggtgatggttccatgttctattttattttaagcaaagcg
gacggccgcttaagcgagaaaaagaaagttacattgggaacacaacccaccacattgcgt
acttttaaatcatttgcgactaccaatgtgtttgcctgctccgatcgtccaactgttatt
tattcctcaaaccacaaattggtgttttcaaatgtgaatttgaaagaagtaaatcatatg
tgctccttgaatgcacaatcgtacccggacagtttggctttggccaccaaaaactcggtg
attttgggcactatcgatgagattcaaaagttgcatattcgtactgtaccacttggtgag
ggtccacgtcgcattgcttatcaggagagttcgcagacttttggcgtggcaacattgcga
gtcgatgtgcaaggacgaggtgggccaaagccaacaaggccaagtgcttcaacgcaggca
cagaatatcacctacgcttcaaacatagtacccaaaccgggtggtggtaatacggcaact
acaaatgccgaagttggccaagaattggatataaacaatttattgataattgatcagaat
acgttcgaagtgctgcatgcgcatcaatttatgccttcagagagcataatttccttaatg
tccgctaggttaggtgatgacccgaatacgtattatgtggtatctactgcgctcatttat
gcagatgagcctgaacctaaagtgggtcgcattattattttccactacaacgaaggaaaa
ttgacacaggtggccgaaacaaaaattgatggctcatgtcactcactggttgagttcaat
ggcaaagtgttggcgggtataaacagttttgtacgcctttatgaatggaccaatgaaaaa
gaattgcgtatggaatgtaatattcagaacaatatttccgttttgtatttaaaagccaaa
ggtgacttcattttggttggcgatctgatgcgctcaatgactttgctgcagcataagcaa
atggagggtattttcgtggagatatcacgtgactgcgatccgaagtggatgcgcgctgta
gaaatcttggatgatgacacatttttgggctcggaaacttatggcaatctttttgtttgc
caaaaagatagtgccgccaccacggacgaggagcgtcagttattacctgaagttgcacgt
ttccatttaggcgatgttgttaatgtattccgccatggttcgttagtgatgcaaaatgta
ggtgaacgcactacgcccaatcagggctgtgtgctgtatggtacagtgaatggcgctata
ggcattgttacacaaataccgcaagaattctacgatttcctacatagccttgaagaacgt
ctaacgaataccattaaatctgtggggaaaatagatcactcctattatagaagctatcaa
acaacacagaagacggagccgtgtgaaaactttatcgatggcgatttaattgaaagtttt
ctcgatttaagcagagataaaatgaaagaaacagttatgggtttggagattacattaaac
ggcgaaaagaaggaagcagacgttgacgatgttattaaaattgtcgaagaccttacgaga
atgcactga
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integrated database retrieval system
