Rhagoletis zephyria (snowberry fruit fly): 108363282
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Entry
108363282 CDS
T08513
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze04145
Phagosome
rze04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
108363282
09142 Cell motility
04814 Motor proteins
108363282
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rze03036
]
108363282
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rze04812
]
108363282
Chromosome and associated proteins [BR:
rze03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
108363282
Cytoskeleton proteins [BR:
rze04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
108363282
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_EML
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_SPT8
Beta-prop_DCAF4
Glyco_transf_5
WD_LRWD1
Beta-prop_WDR11_1st
Beta-prop_IP5PC_F
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
108363282
NCBI-ProteinID:
XP_017472081
LinkDB
All DBs
Position
Unknown
AA seq
416 aa
AA seq
DB search
MIILSEDFQRFVLRAGRVVERALSENVDIYTDYIGAGDNEDTNDERSHARLSLNRIFYDE
RWSKNRCITCMDWSTHFPELVAASYHNNEESPNEPDGVVMVWNTKFKKQTPEDIFHCQSA
VMSTCFAKFNPNLILGGTYSGQIVLWDNRVQKRTPMQRTPLSAAAHTHPVYCLQVVGTQN
AHNVISISSDGKLCSWSLDMLSHPQDTLELQQQRPSKSIAVTGMAFPANEINNLVVGSED
GYVYSACRHGSRTGVNDVFEKHLGPVTGISTHYNQSSPDFGHLFLTSSIDWTIKLWSLKD
TKPLYSFEDNSDYVMDVAWSPIHPALFAAVDGSGRLDLWNLNQDTEVPTASVLVEGAPAL
NRVSWTPSGLHVTIGDDTGKLYIYDVAELLAQPSRDEWSRFNATLNELKMNQSDDV
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgatcatactttccgaggacttccaacggtttgtgttgcgcgcaggtcgtgttgttgaa
cgcgcactctccgagaatgttgatatttatacagactatattggcgctggcgacaatgaa
gacaccaacgatgagcgatcacatgctcgcctctcgttgaatcgtattttttacgatgaa
cgttggtcgaaaaatcgttgcatcacgtgcatggattggtctacacatttccccgaactg
gtggccgcttcatatcacaacaacgaggagagtcctaatgaaccggatggtgttgttatg
gtttggaataccaaatttaaaaaacaaacacccgaagatattttccattgtcaaagcgct
gtgatgtctacgtgctttgccaaattcaatcctaatctaatattgggtggtacatattcg
ggacaaatcgtgttatgggataatcgcgtacagaagcgtacaccaatgcagcgcacacca
ctgagcgccgctgcgcacacacatccggtctattgtttgcaggttgttggcacacagaat
gcgcacaatgttatttccatttcttcggatggcaagttgtgctcgtggagcttggatatg
ttgtcacatcctcaagatacattagagttgcaacagcaacgtccatcgaaatcgattgca
gttactggtatggctttcccggcgaatgagatcaacaatttggtggtgggcagtgaggat
ggttacgtgtactcagcttgtcgccatggttcacgcacgggcgtaaatgatgtcttcgaa
aaacacttgggtccagtaacaggaatctccacacactacaaccaatcgtcacctgacttt
ggacatctgttcttaacttcctctatcgactggacaattaagttatggtctctaaaggac
actaaaccactatattcttttgaagacaactccgattacgtcatggatgttgcatggtcg
cccattcatccagcactttttgctgctgtcgatggtagcggtcgccttgatttgtggaat
cttaatcaggataccgaagtacccacagcatcagttttagttgaaggtgcgccagcgctt
aatcgtgtatcgtggacgccgtcaggtttacacgtgaccattggtgacgatacgggcaaa
ttgtatatttacgatgttgcagagcttctggcgcagccatcacgcgatgaatggtcgcgc
tttaatgcgacactcaatgagctaaaaatgaatcaaagtgatgacgtttaa
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