Rhagoletis zephyria (snowberry fruit fly): 108363461
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Entry
108363461 CDS
T08513
Name
(RefSeq) ATP-dependent RNA helicase DDX3X-like
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rze03019
]
108363461
03041 Spliceosome [BR:
rze03041
]
108363461
03036 Chromosome and associated proteins [BR:
rze03036
]
108363461
Enzymes [BR:
rze01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108363461
Messenger RNA biogenesis [BR:
rze03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
108363461
mRNA cycle factors
Common to processing body (P body) and stress granule
108363461
Spliceosome [BR:
rze03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
108363461
Chromosome and associated proteins [BR:
rze03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
108363461
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
108363461
NCBI-ProteinID:
XP_017472320
LinkDB
All DBs
Position
Unknown
AA seq
734 aa
AA seq
DB search
MSGFSQNEAKGLEQQFAGLDINQSNGGGGGGRYIPPNLRTPVQGEYPPNPPTEYYSRREF
SRDSEPPRADYNRPRYNNYGSDDRSRGYGGGSGGGYDNRNRGGFRDDRGYDNGYMNRNRR
PNNNEGSFFNRNRSLNNSWREPARAGAPDENFRGDGSEQSVAISEMPPPGPQPNYRNGSG
GGFGGPRGNYGGGGAGGPGLRNRNFDPDDWTVPGERNEKYEKVLFSSVHTGINFDQYENI
PVQVSGNTYPPPIETFHDAELNLTPIIDSNVKMAQYTHPTPVQRYAIPIIMRRRDLMACA
QTGSGKTAAFLIPILNNVFSDGPSKLAPPQRGRRRHSPLILIMAPTRELAVQIYDEAKKF
AYRSRVRPCVVYGGSDAGQQIRDLDNGCQLLVATPGRLIDMVERGKVSLECVSHLVLDEA
DRMLDMGFEPQIRQIVLHSNMPPVGVRQTLMFSATFPKKVQELARNFLEDYIFLSVGRVG
STSENITQKIEWVEENDKRTYLLDLLQIELSSSESLTLIFVETKKGADCLEHFLEAAGCS
VTSIHGDRSQNEREGALHSFRTGHTPILVATAVAARGLDIPNVKHVINFDLPNDIEEYVH
RIGRTGRVGNLGLATSFFNDKNRNISADLYELMVETKQDVPDFLKSAVKEFNSDRSGMNR
RYGGGGGGGGGNRRYGSGGFGARDYRQTFDDRNDRYNNGPRMNGFSNHNNHYGGNSNFNR
ATRSNNNGPSCWDS
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtttctctcaaaatgaggcgaaaggtctagaacagcaatttgctggtctggac
attaatcaaagcaacggcggcggcggcggcggaagatacattcctcccaatttgcgaacc
cctgttcagggcgagtatccgcccaatcctccaactgagtactatagccgacgagaattt
tcccgcgattctgagccacctcgtgctgactacaatcgcccacgctacaacaattacgga
tctgatgaccgatctcgtggctacggaggtggtagtggtggtggctacgacaaccgcaat
cgtggtggcttccgcgatgatcgcggctacgataatggctacatgaaccgaaaccgacgc
cctaacaacaatgaaggtagcttctttaatcgcaaccgatccctcaacaactcttggcga
gagcctgctcgtgccggcgctccggacgaaaacttccgaggcgatggctcggagcaaagc
gtggccatctctgagatgcctccgcctggaccccagcccaactaccgcaatggtagcggt
ggtggcttcggcggtcctcgtggcaactacggtggtggcggcgctggtggtcccggtctt
cgcaatcgcaactttgatcccgatgactggactgttcccggcgagcgtaatgagaagtac
gagaaggttctcttctcgagcgtccacactggcatcaactttgaccagtacgaaaatatc
ccggttcaagtttctggcaacacttacccaccacctatcgagacttttcatgatgccgaa
ctgaatctgactccaatcatcgatagcaatgtcaagatggctcagtacacgcaccctacg
ccggttcagcgttacgccatccccatcatcatgcgtcgtcgtgatctgatggcgtgcgcc
cagactggctcaggcaagactgctgccttcctgattcccattctcaacaatgtattctct
gatggcccctcgaagttggcgcctcctcagcgcggccgccgacgccactcgccgctgatt
ctcattatggctcccactcgcgagcttgctgtgcaaatctacgacgaagccaagaagttt
gcttaccgttctcgagtgcgaccctgcgtcgtctacggagggtctgatgctggccagcag
attcgcgacttggacaatggatgccagcttctggtggccacaccaggtcgcttgattgac
atggtcgagcgtggcaaagtgagcctcgagtgcgtctctcacttggttttagatgaagcc
gatcgcatgcttgacatgggtttcgagcctcagattcgccagatcgtgcttcacagcaac
atgcctccggtcggtgttcgacagacgctcatgttctcagccacctttcccaagaaggtg
caggagttggctcgtaacttcctcgaggactacatctttttgtccgtcggtcgcgttggt
agtacttcggagaacatcactcagaagatcgagtgggttgaggaaaacgacaagcgcacc
tatctacttgatttgctgcagattgagctgtctagctccgaatctctgacgctgatcttt
gtggagaccaaaaagggcgctgactgcttggagcactttttggaggctgctggctgttct
gtgaccagtattcatggcgatcgctcccaaaacgagcgcgagggggctctgcacagcttc
cgaactggccacactcccatcttggtggccactgctgtcgccgctcgtggtttggatatt
cccaacgttaagcacgtcattaactttgatttgcctaacgacatcgaagagtacgtccac
cgcattggtcgtactggccgtgtgggcaatctcggtctggcaacttcgttcttcaacgac
aagaatcgaaacatttcggctgacttgtacgagcttatggtcgaaaccaagcaggacgtg
cccgacttcctcaagagcgctgtcaaggagttcaactctgatcgcagcggaatgaaccga
cgctatggcggtggtggaggaggaggcggcggaaaccgacgatatggctctggtggtttt
ggcgctcgcgattatcgtcaaacctttgacgatcgcaatgaccgctacaacaatggacca
cgaatgaacggcttctcgaaccacaacaatcactatggcggcaactcgaactttaaccga
gcaacccgcagcaacaacaatggacccagctgctgggacagctaa
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