Rhagoletis zephyria (snowberry fruit fly): 108363466
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Entry
108363466 CDS
T08513
Name
(RefSeq) LOW QUALITY PROTEIN: semaphorin-1A
KO
K06842
semaphorin 6
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
108363466
NCBI-ProteinID:
XP_017472327
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All DBs
Position
Unknown
AA seq
1152 aa
AA seq
DB search
MLHEPQVKRKMSKGSCHNANSGFTAVAATQVFLVLTLFVIGNLSAWQENVRPKLYVELGP
EDVLKFLGNESVVDHFKLVTKDGNSLLVGARNIVFNLSIHDLTEQQRLVWQSTEDDVKMC
IIKGKAEEACQNYIRIMVVTSPGRLFICGTNSFRPMCNTYIINDNNYTQEASKSGQAVCP
YDPHHNSTSVFADNELYSGTVADFSGSDPIIYREPLQTEQYDSLSLNAPNFVSSFTQGDF
VYFFFRETAVEYINCGKAIYSRVARVCKWDKGGPHRFRNRWTSFLKSRLNCSIPGEYPFY
FNEIQSASNLVEGHYGHTSAKLIYGVFNTPTNSIPGSAVCAFSLQKIADTFEGNFKEQSS
INSNWLPVNNAKVPEPRPGSCHNDSRTLPEPTLNFIKTHSLMDENVPAFFGQPILVRTST
IYRFTQIAVDAQIKTPGGKTYDVIFIGTDHGKIIKSVNAESADSDAKVSSVVIEEIDVLP
KSEPIRNLEIVRTMQYDQPKDGSYDDGKLIIVTDSQVIAIQLHRCHDDKITSCSECVALQ
DPYCAWDKIAGKCRSHGAPRWLEENYFYQNVATGQHAACPSGKINSKDANVGEQKGYRDD
MDLLDSRRQGKDQEIINIMGDKNFEGPQISADIINAQYTVETLVMAVLAGSIFSLLVGFF
TGYFCGRRCHKDEDDNLPYPDTEYEYFEQRQNINRIQAEPKLLPQVEEVTYAEPVLLPQP
PPQNKIQHSPKSTLRKPMHHHGPNSETLFQFQPDGYNTQQTYRGRDNFGTLRSHQVMGDN
YRRGDGFSTTRSVKKAVNTNTRNRSLGRLRRQPPRHGIVTQHRSNSPAQHSSSGSSPVMS
NSSSSPAPPSSSPSPQESPKNCSYIYRDXLICNTKSMPLIKSAAAAAGAAVVTTIAVTQQ
AKTTTTATIAASVKGAIRATTTTAAATATATATATRTTSGKVRTTLAKSVPVTPVQPKSP
ATHFISSSPEWDGVDDGATTQEDHYNNCSDYLPHSYPNYTFDLSEDDSNEIDDELELDDS
SLAMITPPPPYVDTPLQYARAPPPPPHAQRTRRAATAPPPPTRKKLFQNREIFNINTPTI
TPSSSSFASAITPTKLSAAAAAMFAAPQMAQLNKKWTQLHRKRRRRNSSSGDSKELDKLV
LQSVDWDENDIY
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgttacacgaaccacaagtcaaacgaaaaatgtcgaaagggagctgccacaatgccaac
agcggcttcacagccgtcgcagcgacgcaagtcttcctcgtactgacgctgttcgtgatt
gggaatctaagtgcctggcaggagaatgtgcggccgaaactttatgtggaattaggtcct
gaagatgtgctgaaatttctcggaaacgaaagtgtcgtggatcattttaagcttgtcaca
aaggatggcaacagtctgctggtcggtgccagaaatatcgtgttcaatctgagcatacac
gatctaacggaacagcagcgcttggtgtggcaatctaccgaggatgacgtcaagatgtgt
attattaaaggcaaggccgaggaggcatgtcaaaattacattcgcatcatggtggtgacg
tcgccgggtcgtttatttatatgtggcaccaattcatttcggcccatgtgcaatacatac
ataatcaacgacaataactatacccaagaggcgagcaaaagcggccaagcggtatgtccc
tacgatccgcatcacaattcaacgtcagtatttgctgataacgagctatactctggcact
gtggccgatttcagcggcagtgatccgattatctatcgtgagcctctacagacggagcaa
tacgacagcctaagcctcaatgcgccaaattttgttagctcttttacacaaggcgacttc
gtgtattttttctttagagaaacggctgtggagtatataaattgcggaaaagcaatttac
tcacgcgtggcgcgtgtctgcaaatgggacaagggtgggccgcatcgttttcgcaatcgc
tggacatcattcctgaaatcgcgcctcaactgctcaataccaggcgaatatccattctat
ttcaatgagatacaatcggccagcaatctcgtcgaaggacactatggccacacaagcgcc
aaattgatttatggcgtttttaatacgccaacaaattcaattcccggctcagcagtttgt
gcattttcattgcagaaaattgccgacacattcgagggcaactttaaggagcagagcagc
attaactcaaattggttgcctgtcaataatgccaaggtacccgaaccgcgtcctggttcc
tgccacaatgattcacgtacactgccggaaccaacgctgaatttcatcaaaacacattcg
ctaatggatgagaacgtgccggcgtttttcggtcagccaattttggtcagaacgagcaca
atttatcgtttcacacaaatcgctgtggatgcacagataaagacgcctggcgggaagacc
tatgatgtgatattcattggcacagatcatggcaaaattataaaatccgtcaatgccgag
tctgctgactccgatgcgaaggtatcttcggtggtgattgaggaaatcgatgtgctgcca
aagagtgaacccatcagaaatctggaaattgtgcgcacaatgcaatatgatcaaccaaag
gatggcagttacgacgacggaaaattaatcattgtcaccgatagccaagtgattgcaata
caattgcatcgctgtcatgatgacaaaatcaccagctgtagtgaatgtgtggcgctgcag
gatccatactgtgcttgggataaaattgctggcaaatgtcgttcgcatggtgcgccacgt
tggctggaagagaattatttctatcagaatgttgcaactgggcaacatgcggcatgccca
tcaggtaaaatcaattccaaagatgcgaatgtgggcgaacaaaaaggctatcgtgacgat
atggacttattggattcgcgacgccaaggcaaggatcaagaaatcatcaatattatgggt
gataagaatttcgaaggtccacaaatttcagcagatattatcaatgcgcagtataccgtc
gaaacgctggttatggccgtcttagctggctcaattttctcccttctagtgggcttcttt
acaggctacttctgtggccgtcgctgtcataaagatgaggatgacaatctgccatatccc
gatacggagtatgagtactttgaacagcgtcaaaatataaatcgcattcaagccgagccc
aagctgctacctcaagtggaggaggtgacgtacgccgaaccggtgctgttgccacagccg
ccaccacaaaataaaatccaacactcgccgaaaagtacgctacgtaagcccatgcatcat
catggacccaactcagaaacgctcttccagttccagcctgatggctataatactcaacag
acatatcgcggtcgcgacaattttggcacgctgcgatcgcatcaggtgatgggtgataat
tatcgtcggggcgatggcttttcgacaactcgcagcgtcaagaaggctgtaaacacaaat
acacgtaacagaagtcttggtcgtttaagaaggcagccgccccgtcatggtattgtaact
cagcaccgttcgaatagtccagcacaacactccagttccggctcatcgccggtgatgtca
aatagtagttctagtccagcgccaccttccagcagtcctagtccgcaggagagccccaag
aattgtagttacatttaccgtgattgattgatatgtaataccaaatcgatgccactaatc
aaatcagcagcagcagctgcaggagcagcagtagtgaccacaatagccgtaacacagcaa
gcaaaaactacaacaaccgccacaatagcagcaagtgtcaagggagcaataagagcaacc
acaacaacagcagcagcaacagcaacagcaacggccacagccacgcgcaccacgtccggc
aaagtgcgcacaacactcgccaaatccgtaccagttacaccagtacaaccaaaatcacca
gctacacacttcatatcatcatcgcccgaatgggatggcgttgatgatggcgcaacaacg
caggaggaccactataacaactgcagcgattatctgccacattcgtatcccaattatacc
ttcgatctctccgaggacgactcaaatgagattgacgatgaattggagttagacgactca
tcgctagcgatgataacaccgccaccaccctacgtcgacacgccactacaatatgcacgc
gcgccaccaccgccgccgcacgcacagcgtacaagacgcgctgccacagcgccaccgccg
ccgacacgtaagaagctctttcaaaatcgcgaaatattcaatataaatacgccgacgatt
acgccaagcagcagcagctttgccagcgcaataacgccgacaaaattgagcgcagcagcg
gcggctatgtttgcggccccacaaatggcacagctaaataagaaatggacgcagttgcat
cgcaagcggcgacgacggaatagcagttcgggtgattcaaaagagttggataaattggtg
ttacaatcggtcgattgggatgaaaatgatatatattga
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