Rhagoletis zephyria (snowberry fruit fly): 108363624
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Entry
108363624 CDS
T08513
Name
(RefSeq) uncharacterized protein LOC108363624
KO
K18740
exonuclease 3'-5' domain-containing protein 1
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rze03019
]
108363624
Messenger RNA biogenesis [BR:
rze03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
108363624
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WH_Egal
DNA_pol_A_exo1
wHTH_TTC3
Motif
Other DBs
NCBI-GeneID:
108363624
NCBI-ProteinID:
XP_017472530
LinkDB
All DBs
Position
Unknown
AA seq
1034 aa
AA seq
DB search
MDSQGYENARNMTLLFFLERLMDKGEARTVHDLSCQFGNKEFTKEMRQIAGGSQSGLKKL
LAQHPSIFVVDGDYVKVNTYQHASEDDGSYGGRRDYIKEAKDYFKNKMLQYGIGVEVPVR
SLLGHRSQASPQVRHISGQHIKEFTEFLQKHTDTFKVIDDHVMLVGCDDMTDLPAQDRLH
LPQSNIDTKATQQMVDFFAQCIETKGPILVDQLFHLLTARFPQEQWLRMFKTPNDLSTFL
KLFSDCFHIQANLVTLLQKPKLSDSYIQQAQARTREQYNSMNNNINNMALKNQSPPPAAQ
PALSAVQQRLQSPALRNFANNNTISTSSPQSAHVNNMSSSNNNNCSITSPNFKLNAPVSN
MSSPVVAPTDNASQTRSEPNSGFDSFIQMSDVHLDNLCDRNCPSPNTCSSYGPPGNNNPP
LLGGQNNLNSLQNSAISTQANTERPNSLNQTLKQRVNNLVIRTLAENYEKDKQSLANQVG
GASAGYNPQNSSSHSSPVHSNSINVASTAGGSTNASSNSTAAVNANNTSHSPSHNYFVGD
TWRLKVMQNTTVINTVHRSLFVTEAMLKFAQQNNQSIVISLDCEGINLGLKGEITLIEIG
TTRGEAFIFDVRTCPEIISDGGLKTLLEHENVIKVIHDCRNDAANLYLQFGILLRNVFDT
QAAYAIIQYQETGKQVYKAKYISLNTLCEQYNAPINPIKEQLKQIYRRDQKYWAKRPLSR
DMLLYAAGDVLVLINDQLYGNLARQIKPENRQLFSELCTEQILIQIKPNEVKTRKKQRKV
TTEVTDLKQKLEQSNKSIVLSNREIRLLRYMDLTEEEKDRLKRNNNKVAKKFEKMESAGN
QTRDQSDSEDEQEPTENDNFPSLDSVPSDNSLTGTFSPRFNSEPPSLAESMQMMDEILAD
QSMDRVVKLDKLEAILSAVTQMPNDQIITSNTMQDQLSSNISATDNVQVVREKTKNAKNC
NCNCERSSTPTIRLVNNEKKAVKSIDSASQTLSTGDIVITKIFFQDEQGKPKEKVLTSSP
KRIGGPSTIASTTS
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atggattcgcagggctatgagaatgcacgtaacatgacgctgctctttttccttgagcgt
ctcatggacaagggcgaggcgcgcaccgtacatgatttgtcctgtcaatttggtaataag
gagttcaccaaggagatgcgtcaaattgctggcggtagccaatcgggtttgaagaagctg
cttgctcagcatccatcaatattcgttgtggacggtgactatgtgaaggtgaatacttac
cagcacgcttcggaggacgatggtagctatggcggacgacgtgattacattaaagaggct
aaagactattttaaaaataaaatgctacagtatggtattggcgtagaggtgccggtgcgc
agcttattgggtcatcgttcgcaggcgtcaccgcaggtgcggcatatttcaggtcaacat
ataaaagagttcactgagtttctacagaagcatactgataccttcaaggtgatcgatgat
catgtgatgcttgttggctgcgatgatatgacggacttgccggcgcaagatcgtctgcat
ttgccacagagcaatattgatacgaaagccacccagcagatggtggatttctttgcgcaa
tgcattgagacgaagggtccgattttggtggatcaattatttcatttattgacagcacgc
ttcccccaggagcagtggttgcgcatgttcaaaacacccaacgatctctcgaccttcctc
aagctcttttctgattgtttccacatacaagccaatctagtcacgttgttgcagaagccc
aagttgagtgattcatatatccagcaggcgcaggcgcgtacgcgcgagcaatataattcg
atgaacaacaacatcaacaatatggcattgaagaatcaatcaccaccaccggcggcgcaa
ccagccctcagcgctgtacagcaacgtttgcaatcgccggcgttgcgtaattttgccaac
aacaataccatcagcacttcatcgccacaaagtgcacatgtgaataacatgagcagcagc
aacaacaacaattgcagcattacatcaccaaattttaagctaaatgcgcctgtatccaat
atgtctagtccggtggtagcgccaaccgataatgcgtcacaaacacgatcagaacccaat
tcaggcttcgatagtttcatacaaatgtcggacgttcacctggacaacctttgcgatcgc
aattgcccaagcccgaatacttgttcttcatacggcccgcccggcaacaataatccacct
cttttgggtggtcaaaataatctgaattcattgcaaaattccgccatatcgacacaagcg
aacacagaacgcccgaacagtctcaatcagacactgaagcaacgcgtgaacaacttggtt
atacgtactctagccgagaactacgaaaaagacaagcagtcactggccaaccaggtgggt
ggtgcatctgccggctacaatccacagaactcatcctcccattcaagtcccgtgcattcc
aatagcatcaatgtcgcgagcacagctggtggcagcacaaacgcgagttcaaactcgaca
gctgccgtcaacgcgaacaacacatcacattcacctagtcataattattttgttggcgat
acctggaggcttaaggtaatgcagaataccacagtgattaacacagtgcaccgctccctg
ttcgtcaccgaggcgatgttgaagtttgcgcagcagaataatcagagcatagtcatatcg
ctggactgcgaaggcattaatttgggtttgaagggcgaaatcacgctcattgaaatcggc
accacacgtggcgaagcattcattttcgatgtgcgcacatgtcctgagataatcagcgat
ggtggcctgaagacgttgttggagcatgaaaatgtcatcaaggtcatacacgactgccgc
aatgatgcagcgaatttgtatttgcagtttggcatacttttacggaatgtattcgatacg
caggccgcatatgccatcatacagtatcaggagacgggtaaacaagtttacaaagcgaaa
tacatttcactgaatacactatgcgaacagtataatgcccccatcaatccgattaaggag
caactcaagcagatttaccgtcgcgatcaaaaatattgggccaagcggccattatcgcgt
gatatgctgctctatgcggccggtgatgtgcttgtcttaatcaacgatcagctctacggt
aatctagcgagacaaataaaaccagagaatcgtcagcttttctctgagctttgcactgaa
caaatactcatacaaatcaaacccaatgaggtgaagacacgcaagaagcagcgcaaggtg
accactgaggtgactgacctcaaacagaaactagagcagtcaaacaagagtatcgtgctg
tcgaatcgtgaaattcgcttgttgcgctacatggacttgaccgaggaagagaaggaccgt
ctgaagcgcaataacaataaagtagcaaagaagtttgaaaaaatggaatcggctggtaac
caaactagggatcaaagtgattctgaggatgaacaagaacccactgaaaacgataacttt
ccaagtctcgactcagtgccatcagacaattcattaaccggcacattttcgccacgcttc
aactctgagccacccagtttggccgagtctatgcaaatgatggatgaaatcttagcagat
caatccatggatcgagtggtgaaattggataagctggaagcgatattgtcggccgttaca
caaatgccaaatgatcaaattataacttccaacacaatgcaggatcaattgagctcaaac
atatccgccactgataatgtacaagttgtacgtgagaagaccaaaaacgctaagaattgc
aattgtaactgcgaacgcagtagtacaccaaccatacgtctggttaacaatgaaaagaag
gctgtgaaatcgatcgactcagcatcgcaaacacttagtactggcgatattgtcataaca
aagattttcttccaagatgagcagggaaaacctaaggagaaggtgctaacctcatcgcca
aaacgcattggcgggccatccacgatagcgtcaacgacatcttga
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