Rhagoletis zephyria (snowberry fruit fly): 108363637
Help
Entry
108363637 CDS
T08513
Name
(RefSeq) zinc finger SWIM domain-containing protein 8
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rze04121
]
108363637
Ubiquitin system [BR:
rze04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
108363637
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Motif
Other DBs
NCBI-GeneID:
108363637
NCBI-ProteinID:
XP_017472549
LinkDB
All DBs
Position
Unknown
AA seq
2102 aa
AA seq
DB search
NTSILANRSGNNGNGGGGGGSGGGNNAAGGGNAAEGSRRNGAGGAAAAANVAAAANVAGG
AGEQGAAAGAGAAEWNPEEIDRFSFDDSDRFEEDSLCSWSSEPESLCNNWRGWKKPSSFG
LTNPIAASASSTPAAISAPRKSEAEGEVSSLTELAARCVASYIPFELVEHVYPPVPEQLQ
LRIAFWSFPDNEEDIRLYSCLANSSADEFNRGDQLFKTRAVKDTLQIGFHLSATVVGQTP
RAHFNVAVTFDRRRISSCNCTCTSPAYWCSHVVAVCLHRIHNPLEVCLRAPVSESLTRLQ
RDQLQKFAQYLISELPQQILPTAQRLLDELLSSQPTAINTVCGAPDPTAGASVHDQTSWY
LDEKTLHANIKRILIKFCLPAPIVFSDVNYLTNSAPPAAAEWSSLLRPLRGREPEGMWNL
LSIVREMYRRCDRNAVRLLEIITEECMVCDQILIWWFQTKLSLMMGSHGHSGGKHSNTHS
NSTALQHACSSLCDEIVVLWRLAALNPGLAPDERDMLHAQFTAWHLKILDRVVKCRMMPP
SYSNKHQQNSRSDAEMFIGFKPAIEACYLDWEEYPIAGITHTHDTNPIYYSPFTCFKHTD
SKSETNSGQLNATQAVMANNKHYNYISSSTDHGMHAAFKQRHERPFRERFYISSSNNSSN
SSSDSVHARLHQGLGSGGMAGAAAGIIPIVTDGSSSKAGASSNLGNVEGSGLRTDAGPSG
SGHGGGVPGGGVTITSISGPSAIADLPRLPMSSVSGGGGGSGVGGGGGDGNRSSASSEGF
CENEDFGGDSSSNNLCAEGGQTLEPAHAAAVGVGGGNVSMAMRLEDVDAQRGFEALSTIV
VSDVPTALGAVGPSGVSSYQTTTSLSSDTSSSTSSSSSKSSSSSMLMGAAGIDTTPEMIA
KSKSNIMTVVDVRRMSKDESFSSSSDEFTTQDLPTVVKPEELIPVASTSAAAAAAAAAAS
VSAPSSTSTSTPVSANKQSPTANNSHAAAAAVGNQLAPSTSAPATQHTAAAANEKPHIFS
NVRPTEDAWDILLARAEGLHAHGHGREACILAVRLAEEMLANPPNLMVELPQMPKRKGKN
KNINPISHHLTVLASSTLSKCAFLCTVLSENSEHFHIAFRICLFALEMPRPPASTKPLEV
KLANQEADILTLLKKIPLNEPELQVIRERAECLRSGTFKTRGEALLPINLATFIFDALVM
PLLTVKEQRNRFMSMMYRLPSDENLGFEAAVAALGLKANVSEAEHPLLCEGTRRQRGELA
LSLLCYYKDEPRKIAKIMEKLLDREIHVLLKSPLLPAYYSSNPPVRTAASSMSRREEHEY
ATAMNGGAHNPNLNDMFPSDYGSVGGNSRPHSSTSAELEVGMGTLSVSSSQGGGSGTLTG
AASSNPTMTGPGGQTNVAGGATSRSKDSRYKGKRAYPSIPNQPSEASAHFMFELAKNLLI
KAGGNSSTSLFTQATTNHNHHGPHRALHMCAFQLGLYALGLHNWVSPNWLSRTYSSHVSW
ILGQAMEIGAPAISFLIDTWEGHLTPPEAAGMADRASRGWDNNMVYPAAELALSVLPHAA
ALNPNEIQRAILQCKEQSDHMLERACITVENAAKGGGVYPEVLFQVARYWYELYGHNTPN
NEHEQHDDHLDHSAVSLSALIESHQHHEMQQQMQAQVQAQQQQPPGGMVGPPPVMPTGPP
GGPNAPGQPSQVVVTTAPQPFQQGVATLASIGLPPYPPYSFCQNLYHHNITTYPGNQMQM
YISAGPPPPQAYPGYPPPPTQQQNAPPLQPAGAAQPPSPYVHQSSAPSGGFPPQMQPQQL
PPQAYQALQCGAAGAPPTGFPPQPGQGGPPQMPPQNMQQVAAAAAYYAQPPHQQGPPQHP
SQAAAAASVAMAQHQMRQQQQQVVYPPFVQAQQVQQAPPVHASPPQPPVRQRHPHQFTST
QLRYLLAAYNVGMLAMETLARRVHDDRPQAKYARNPPYGEDVKWLLRISKKLGTQYLHQF
CVCAVNSIVSPFVLHDVAIESAHYLGRNNHQLVMQHLRSALTPLVQKCQQMYIQCIHQKL
YHLTQADYEDFASIILAARAAFQITPEGSAQFKDWLQSIKRSKSCKKELWTQINAALQSN
SK
NT seq
6309 nt
NT seq
+upstream
nt +downstream
nt
aataccagcatcctggcgaatcgcagcggtaacaacggaaacggtggtggtggtggtggt
agtggcggcggcaataacgctgctggtggtggaaatgctgcagagggatcgcgacgtaat
ggcgctggcggtgccgctgcagccgctaacgttgcggcagccgctaacgttgcaggaggt
gctggcgagcaaggcgccgcagcgggtgccggagcagcagagtggaacccagaagaaatt
gatcgttttagttttgacgattcggatcgcttcgaagaagattcgctttgcagttggagt
tcagaaccagaatcgctatgcaacaattggcgtggctggaagaaaccttctagtttcggt
ttgaccaatccgattgccgccagtgctagttccacaccagccgccattagtgcgccccgc
aaaagtgaagcagaaggtgaagtttcttcactgaccgagcttgctgctcgctgtgtcgcc
tcctacatacctttcgaactggttgaacacgtttatccgcccgtaccggagcaactgcag
ctgcgtatagcgttttggagttttccggacaatgaggaggatatacgcctctattcgtgc
ttagctaatagttcagctgacgaatttaaccgcggcgatcaattgttcaagacgcgcgcc
gtgaaagacacactacaaattggttttcatttgtccgccacagtagttggacaaacacca
cgtgcccacttcaatgtggccgttaccttcgatcgtaggcgcatctcgtcgtgcaactgc
acctgcacttcgcccgcctactggtgctcgcacgtggtcgccgtttgtttacatagaatt
cataatcccctagaagtatgtttacgtgcaccggtctccgaatctttgacgcgtctacaa
cgtgatcaactgcagaaattcgcgcaatatttaatcagcgaattacctcaacaaatttta
ccaactgcgcagcgtttgctcgatgagctgctcagctcacagcccactgccatcaatacg
gtgtgtggtgcgcctgatccgacagctggtgcttctgttcacgatcagactagttggtat
ttggacgagaagacgttgcatgctaatattaagcgtattttaattaaattttgcctaccg
gcgccaatagtttttagcgatgtaaattatttaacaaactctgctccaccggctgctgcc
gaatggagttctctgttgcgtcctttacgtggtcgtgagccggagggcatgtggaatcta
ttgtcgattgtacgtgaaatgtatagacgttgtgatcgcaatgctgtccgtcttctggag
atcatcaccgaggaatgcatggtgtgcgatcaaatattgatatggtggttccaaacgaaa
ttgtctctgatgatgggctcacacgggcatagcggtggcaagcactcgaatacgcattcg
aattcaacagctctgcagcatgcatgtagctcattgtgtgacgaaattgtggttttatgg
cgattggcagcgctaaatcccggcttggcgcctgatgagcgcgatatgctgcatgcacaa
tttactgcgtggcatcttaagatactcgatcgcgtagtaaagtgtcgcatgatgccgcca
tcgtatagcaataaacatcaacagaattcaagatctgatgccgagatgtttattggtttc
aagccagccattgaagcatgttatttggactgggaggagtatcccattgcgggaatcaca
catacacacgataccaatcccatatactattcgcccttcacttgtttcaagcacactgat
tcgaaaagtgaaacgaatagtggtcagctgaatgccacgcaagcagtaatggccaacaac
aaacattacaactacatcagttcatctacagatcacgggatgcatgcagcgtttaagcaa
cggcacgagcgcccgttccgtgaacgattctacatttcgtccagcaacaactcgagcaac
tcttcaagcgacagcgtacatgcgcgtctacatcaaggacttggctccggtggaatggca
ggcgctgcagctggcattatccctatagttactgacggttcgtcgagcaaagcaggcgct
agcagcaatctaggtaacgtggaaggcagtggcttacgtacagatgctggaccaagtgga
agtgggcatggtggaggcgttcctggcggtggcgttaccatcaccagcataagcgggcca
tctgctattgctgatttgccacgcctacccatgagcagtgtttccggcggtggtgggggc
agcggcgtaggtggcgggggtggtgatggcaatcgttctagcgcaagcagtgaaggattt
tgcgagaatgaagactttggcggcgatagcagtagtaataatctctgtgccgagggtggg
caaacactggagccggctcatgcggccgcagtaggtgtcggcggcggtaatgtgagtatg
gccatgcgtttggaggatgtagatgcacagcgtggcttcgaagcactgagtacgattgtt
gtaagcgacgttccgacggccttgggagccgttggtcccagtggtgtatcttcatatcaa
acaaccacatctctgtcgtccgacacctcgtcatccacctcaagctcctcgtcgaaatca
tcatcgtcatcgatgttaatgggcgcagctggcatagataccacacccgaaatgatagcg
aaaagtaaaagcaatataatgacagtggtggacgtccgacgcatgtcaaaggatgagtcc
ttctcttcatccagcgatgagtttaccacacaagacttgcccactgtggtcaaaccagag
gaactaatacctgtggctagtacatctgctgcagcagcggcggcagcagctgcggcatcg
gtgtcggcaccatcttccacgtcgacttccacacctgtatcagctaataaacaatcgcca
accgccaataactcccacgcagcagcagctgcagttggcaatcaactggcgccatcgaca
tcggcccctgcaactcagcatacggcagcagccgcaaatgaaaagccgcacatattctca
aatgtccgtcccactgaggacgcatgggatatactgttggcgcgtgccgagggtctgcat
gcacacgggcatgggcgagaggcatgcatattggcggtacgtctggcggaagagatgttg
gcgaatccacctaatttaatggtggaactaccacaaatgccgaagcgtaaaggcaaaaat
aagaatatcaatcccatctcacatcaccttaccgtcctggcatcttctaccctgtcaaaa
tgtgcgttcttatgcactgtgttgtcggagaattcggagcattttcacatcgcattcagg
atctgtttattcgcattggaaatgccacgtccgccagccagcacaaaaccattggaagtc
aaactggccaaccaggaggcagatatactcactttgctaaagaaaatacccctcaacgag
cccgagctgcaggttatacgcgaacgcgctgaatgtctacgcagcggtacattcaagacg
cgtggtgaggcattgttgccaatcaacttggctacatttatcttcgatgcacttgttatg
ccactgctaacagttaaagagcaacgcaatcgcttcatgagcatgatgtatcggctgcct
tccgatgagaatttggggttcgaggcagccgtagccgcattgggactgaaagccaacgtt
tcggaggcagagcatccgctgctgtgtgaaggcacacggcgtcaacgtggagaattggca
cttagcctgctctgctattacaaggacgaaccgcgtaaaattgctaagatcatggagaaa
ctattagaccgcgaaatacatgttttgctgaaatctccgttgctgccagcctattactcg
agcaacccgcccgtgcgcacggccgcatcgtctatgtcgcggcgggaggaacatgagtac
gctaccgccatgaatggcggcgcacataatcccaatctcaatgacatgttcccctcggac
tatggctctgtgggcggaaatagccgtcctcatagttccaccagcgctgagttagaggta
ggcatgggtacattaagcgtctcttcgtcccaaggtggcggaagtggcacacttactggc
gccgctagcagtaatccaacaatgaccgggccgggtggtcaaacaaacgtcgcaggcggc
gctaccagtcgttccaaggatagccgttacaagggcaaacgggcatatccttcaataccc
aatcaaccgtcggaagccagcgcacatttcatgttcgagttagctaagaatttactaata
aaagccggcgggaactcgtcgacgtcacttttcacgcaagctaccacaaatcacaatcac
catggaccgcatcgtgcgctgcatatgtgcgcctttcagctgggtctgtacgcgctcggc
ttacacaactgggtcagccccaactggctgtcgcgcacctattcctcgcacgtatcctgg
attcttggccaagcaatggaaatcggtgcaccggccattagttttcttattgacacatgg
gaaggccatttaacgccgcccgaggcagctggaatggctgatcgcgcatcccgtggctgg
gacaacaatatggtttatccggcggctgagctcgcgctttccgtgctgccacatgcagcc
gcactcaatcccaacgaaatccaaagggccatactgcaatgcaaagaacagagcgaccac
atgcttgagcgcgcctgcatcaccgtcgaaaatgcagccaaaggtggaggagtttatccg
gaagtgctgttccaagtagcgcgttactggtacgagttgtacggccacaatacaccgaac
aatgaacatgaacagcacgacgatcacctggatcattctgccgtgagcctcagtgcgctg
atcgaatcacatcagcaccacgaaatgcaacagcaaatgcaggcacaagtgcaggcacag
caacagcagccacctggcggtatggttggcccaccgccggtcatgccaacaggaccaccg
ggtggccctaatgcgcccggacagccaagtcaagtcgtcgtcaccacagcgccgcaaccc
ttccaacaaggtgttgccacactggcgtccattggcttgccaccgtacccgccgtatagt
ttctgccaaaacctttaccatcacaacatcaccacctatccgggtaatcagatgcaaatg
tacatctctgccggcccaccgccaccgcaagcatatccgggctacccgccaccaccaaca
caacaacagaatgcgccacccttacagccagcgggcgctgctcagccaccctcgccgtat
gtgcaccaatcgtcagcacccagcggcggatttccaccacaaatgcaaccacagcaatta
ccaccgcaagcataccaggcgttgcaatgcggcgctgcgggtgcgccaccaacgggcttc
ccaccacaacctggccaaggtggaccaccgcaaatgccgccgcaaaatatgcagcaagtt
gctgcagctgccgcgtactatgcccagccaccgcaccaacaaggaccgccgcaacatcca
tcacaggcagccgcagcggctagcgtggccatggcacagcaccaaatgcggcaacagcag
cagcaggttgtctatccgccgttcgtgcaagcacagcaggtgcaacaggcgccgccagtg
catgcatcaccaccacagccgcctgtacgccaacgacatccgcatcaattcacctcaacc
caattacgttatctactcgccgcctacaatgttggtatgttggccatggagacgttagca
cgtcgcgtacacgatgatcgtccacaggcaaagtatgctcgcaatccaccctacggtgag
gatgtgaaatggctgctgcgtatctccaagaaactcggcacgcaatatctgcaccaattt
tgcgtatgcgcagtcaattcgatagttagtcccttcgtgctgcacgatgtggctatcgaa
tcggcacactatctggggcgcaacaatcatcaattggtaatgcagcacttgcgctcggcg
ctgacccctttggtgcaaaaatgtcaacagatgtatattcagtgtatacaccagaagtta
taccatctcacgcaggccgattacgaggattttgctagcatcatcttggctgcacgcgcc
gctttccaaattacacccgaaggcagtgctcagttcaaagattggctacagtctatcaaa
agatcgaagtcctgcaaaaaagagctgtggacacaaatcaacgcagctctacaaagcaat
tccaaatga
DBGET
integrated database retrieval system
