Rhagoletis zephyria (snowberry fruit fly): 108363901
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Entry
108363901 CDS
T08513
Name
(RefSeq) TATA-binding protein-associated factor 172-like
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rze03021
]
108363901
Transcription machinery [BR:
rze03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
108363901
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
Helicase_C
HEAT_EF3_N
HEAT
ResIII
TPR_Trm732_C
Vac14_Fab1_bd
mTOR_dom
CBM49
Motif
Other DBs
NCBI-GeneID:
108363901
NCBI-ProteinID:
XP_017472916
LinkDB
All DBs
Position
Unknown
AA seq
1897 aa
AA seq
DB search
MFDRYDVHTVIKCGHNLLASEGKEFDNPEEAVTLSALDAKEKIARQRKLLNERLGLDMAE
KLGFQLDLISSCDLESTNGVTAQTEGASNSTPMNEEKLNEVLTKATGGRQMVKRQKSLST
SGAKQTLKRLKSTESLVDEVSKKVKAEPMDESAGGETSSAEPVSTAEAEVNEWPLEWFSD
ELMGDLFNPLWEIRHGAATGLREIVKLQGRCGGRHRSALASEMDQHNQQWLEDLSLRLLS
VLALDRFGDFLSDQVVAPVRETCAQVLGLVINLLTVEGVGNVLQILLQLLRCSEWEARHG
GMLGLKYLLAVRQDMISTLLPTVFEPVFSGLKDSVDDVSAVAAAALVPVKNELMSLIPEK
VPLVIAFLWEALLDLDDLSSSTGDLLMLLSSLLTFKGQEMQHNLYDDKELVRLIPRLWPF
LSHSLSSVRKSVLDSLLILCDKSSDDWLTPSLLSEALRLLYQRSLVENLNSVLEMLHKVW
HSLVSKAKYSQMIEATCNYVTGWICLMMHPQKVAIDPQTSPVWLELKHIIASQHESGGRA
RNGNRDDSTMEALTEQYYIGGAESLCDTSEEREKCVIRARYQCARLIGTLAYFLTEPYLD
QLPPPGPATTTAAAAAVPNGNGSTTSAEQEPASAVQPAAAPNALESFAGILLFHLNSKSA
IQRMCTSWIIKEWAVVMVSRRGERPPLWLAKSEDDAREPLVSKLYKPLSDRCFELLQESL
FYDELQNQFTRLQIHTRDFISYLRLNKIPFNETEFGASNVYTCPKINDLVNDVSSNSLAE
LKRQYNSSKKPTKKLKASIDTVEERITFLRRQCGEMQTYSSSLTIAVNSALASALISWHY
LPEKLNPIVRPVMDSIKAEENEQLQRGSASSLVQLLRLCCERFYLNPSLPTPLPKIIKNL
IGFMCSDRNFTPEISLLGATEVEVVGATEDSSNKKKKKTESRVMKKVQLGILTLDNMQRN
AEKSTTFRRSNSVSVKSQKSVDESNSAAAAGSSGGQATANGGNSASTSAAGSTPTATPAV
PSELDDKRNEILRRGATIALSESCRYFGTFLPDRLPTLWEHILHLISSKASPPFSEPSLA
DAKYLIQCLQVFEVVGPNLEQSMQLELLTAVDFLSTCLESSFITIRHMAARCFGMLSTIL
QSQTMNVILTKTLDLLDSTECELKRQGAVEAICCVIEKLSLKIVPYIVFLIVPMLGRMSD
QNESVRLLATHCFAQLVQLMPLDNDNQNKQPKMPEFSEELLKRKESERHFLEQLMNVKKI
DDYRLPVPVEAELRTYQQDGLNWLAFLNKYKLHGIVADEMGLGKTLQAICILASDHHYIM
ARYQSGESKNRPLPSIVICPPTLTGHWLYEVGKFVSAQHLNPIHYTGPPFERAKLKHKIK
KALQTSSQGSRQGDKVKHHYNLIIASYDLVRNDIDFFSAIRWNYCILDEGHVIKNGKTKL
AKAIKSLTANHRLILTGTPIQNNVLELWSLFDFLMPGFLGTERQFMARYSKPILASRDAK
SSSKEQEAGILAMEGLHRQVLPFILRRMKEDVLKDLPPKIIQDYYCELSPLQGQLYEDFY
KSRARQSLKQAIDTEVEEIAGGQTAGETEKKGAEKKGAAGSANKSHIFQSLQYLRKVCNH
PKLVLSPSHPHYETIMAKLKAENNPLADINNAAKLVALKQLLLDCGIGAAADSTGTGGAQ
AVVPVVNQHRALVFCQLKGMLDIVENDLLKVHMRSVSYLRLDGDVPANSRYSVIHRFNND
PSIDILLLTTQVGGLGLNLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNVYRLIT
TGTLEEKIMGLQKFKLTIANTVISSENSSLDSMATDQLLDLFDGGGGGHSSSSAGGKAPV
SMKMMLDNLPELWDIQQYENEYDLNNFMQSLQSSSSG
NT seq
5694 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaccgatatgacgtgcacaccgtcatcaagtgtggtcacaatttgctcgcttcg
gaaggcaaagagtttgacaatcccgaggaggcggtcacgttgagtgctctcgatgcaaag
gagaaaattgcccgacagcgaaaactgctcaatgaaagactaggactggatatggcggag
aagctgggcttccaactggacctcatctccagctgtgacttggagagcaccaatggagtc
accgctcagactgaaggcgcatccaactcaacgccaatgaatgaagagaagttgaacgaa
gtcctcacaaaggctaccggtgggcggcagatggtgaagaggcaaaagtcactgtccacc
agtggtgcgaagcagacgctgaagaggttaaagtccaccgagtccttggtggatgaagta
agcaagaaggtgaaagctgagcccatggatgagagcgctggcggagagacatcgtccgct
gagccagtctccacagctgaagcagaggtcaacgagtggccgctggagtggttcagcgac
gagctgatgggcgacctcttcaacccactctgggaaattcgccacggcgccgccactgga
ctgcgcgaaattgtgaagctgcagggaagatgcggcggtcgacaccggtcagcgctggcc
agcgaaatggaccagcacaaccaacagtggctggaggacctctcactgcgccttctctcc
gttctcgccctcgaccgcttcggtgactttctctccgaccaggtggtggccccggtgcgc
gagacctgcgctcaggtgctcggtctggtgatcaacctgctgacggtggagggcgtcggc
aatgtcctgcagattctacttcagctgcttcgctgctcagagtgggaggcacgtcacggc
ggaatgctcggcctgaagtacctgctcgccgttcgccaggacatgatcagcacactcctg
ccgacggtctttgagccggtcttcagcggcctcaaggactcggtggacgacgtgtcggca
gtggccgccgccgccctcgtcccggtgaagaacgaactgatgagcttaattcccgagaag
gtgcctctggtgattgccttcctctgggaggcccttctcgatctggacgatctgagctcc
tccacgggtgatctgctgatgctgctctcctctctactcaccttcaaaggccaggagatg
cagcacaacctctacgacgacaaggagctggtcagactgattccccgtctgtggcccttt
ctctcgcactcgctctcttcagtgcgcaagtcagtgctcgactcgctgctgattctttgt
gataagagctccgatgactggctgacgccgtcgctgctgtccgaggcgctgcgattgctc
taccagcggtcactcgtcgagaatctcaactctgtcctggagatgctccacaaggtctgg
cacagtctcgtctcgaaggccaagtactcgcagatgattgaggccacctgcaactacgtc
accgggtggatctgcctgatgatgcacccgcagaaggtcgccattgacccgcagacctcg
cccgtctggctcgagctgaagcatatcattgccagtcaacatgagagtggtggcagggct
cgaaacggaaaccgagacgactcgaccatggaggccctaactgaacagtattacattggc
ggtgccgagtcactctgcgacaccagtgaggagcgcgaaaagtgcgtcattcgggcgcgg
tatcagtgcgccagactgattggcacactggcgtactttctcaccgagccctacctcgat
cagctgccgccacctggcccagccactaccacagcagcagcagcagcagttccgaatggc
aatggcagcactacttctgcagagcaggaaccagcttctgcggtccagccagcagcagct
cccaatgcactggaaagctttgccggcattctgctgtttcacctgaacagcaagtcggcc
attcagcggatgtgcacctcgtggatcatcaaagagtgggcggtggtgatggtctctcgt
cggggggaacgcccgcccctgtggctggccaagagcgaggacgatgcgagagagccgctg
gtgtcgaagctgtacaagccactcagtgaccggtgctttgagctgctgcaggagtccctc
ttctacgatgagcttcagaatcagttcacccgtctgcagattcacactcgtgactttatc
agctacctgcgtctgaataagattccattcaatgaaacggagtttggcgccagcaacgtg
tacacctgtccgaaaatcaacgacctggtgaacgatgtgtcgagtaacagcctcgccgag
ctgaagcgccagtacaacagcagcaagaagccgacgaagaagctgaaggcgagcattgac
accgtcgaggagcgaatcacctttctgcggcggcaatgcggcgaaatgcagacctactca
agctcgctgaccattgccgtaaactctgcgctggccagtgccctcatctcctggcactac
ctgccggagaagctcaatcccattgtccgaccggtgatggactcgataaaggccgaggag
aatgagcagctgcagcgaggctcggcctctagtttggtgcaactacttagactgtgctgt
gaacggttttacctcaaccccagcctgcccacgccactgcctaagattatcaagaatctc
attggattcatgtgctcggatagaaactttacgccggagatatcgctgctcggtgcgacc
gaggttgaggtggttggagcaacggaggacagcagtaacaaaaagaagaaaaagacggaa
agccgagtcatgaaaaaggttcagctgggcattctaacgctggacaatatgcagaggaac
gcggagaagtcgaccaccttcaggcggtccaattcagtgagcgtcaaaagtcaaaagtcc
gtcgatgaaagcaacagtgctgctgctgccggcagcagtggcggccaagcgacggctaat
ggcggtaacagtgcctcaacatcagcagcaggcagcactcccactgccacgccggcagtt
ccctccgagcttgacgacaagaggaatgaaattctgcgtcgaggtgccacgatcgccctc
tccgagtcctgtcgctactttggcaccttcctgccggaccgcctgcccaccctgtgggag
cacattcttcacctgatcagctccaaggcgtccccgccgttcagtgagccgtcgctggcc
gatgccaaatacttaattcagtgcctgcaggtcttcgaggtggtgggcccgaatctggag
cagtcgatgcagctggagctgctcaccgcggtggactttctcagcacctgtctggagtcg
tccttcatcaccattcgccacatggccgcccggtgcttcggcatgctctccaccattctg
cagagtcagacgatgaatgtcatcctcacgaagacgcttgatctgctcgactcgacggag
tgcgagctgaagcgccagggcgccgtcgaggcgatctgctgtgtaattgagaagctgtca
ctgaagattgtgccctacattgtcttcctcattgtgcccatgttgggacgaatgtctgac
caaaatgaaagcgtccgtctgctggcgacgcactgctttgcccagctagtgcagttgatg
ccacttgataatgacaatcaaaacaaacagccaaagatgcctgagttctctgaagagctg
ctcaagcggaaggaaagtgagcgccattttttggagcaactgatgaacgtgaaaaagatc
gacgattatcgactgcccgttccggtggaggcggagctgcgcacctaccaacaggacggc
ctcaactggctggcctttctcaacaagtacaaactgcacggcatcgtcgccgacgagatg
ggcctggggaagaccctccaggcgatctgcatactcgcctctgaccaccactacattatg
gctcgctaccagagcggcgagtcgaagaaccggcccctgccctccatcgtcatctgtccg
cccaccctcaccgggcactggctgtacgaggtgggcaagtttgtcagcgcccagcacctc
aaccccatccactacaccggaccgccctttgagcgggccaaactgaagcacaagatcaag
aaggcgctgcagacgagctctcaggggagcaggcagggcgacaaggtgaagcaccactac
aacctcatcattgcctcctacgatctggtgcgcaatgacattgacttcttctccgccatc
aggtggaactactgcatcctcgacgagggacacgtcatcaagaacggaaagaccaaactg
gcaaaggccatcaagtcgctgaccgccaatcaccgcctaatactgacggggacgcccatt
cagaataacgtcctcgagctgtggtcgctctttgactttctcatgcccggctttctcggc
actgagcggcagtttatggcgcgctactcgaagcccattctagcgtctcgcgacgcaaag
agctcctccaaggagcaggaagccggcattctcgccatggaaggcctccaccgacaggtg
ctgccctttattctccgccgaatgaaggaggacgtgctgaaggacctgccgccgaagatc
atccaggactactactgcgagctcagtccgctgcagggtcagctgtacgaggacttctac
aagagtcgcgcccggcagtcgctcaagcaggccatcgacacggaggtggaggagattgct
ggagggcagactgcgggcgagactgagaagaagggggcggagaagaagggcgcggccggc
tctgccaacaagtcgcacatctttcagtcgctgcagtacctgcgcaaggtgtgcaaccac
ccgaagctggtgctctcgccgtcgcatccgcactacgagacgatcatggccaagctgaag
gcggagaacaacccgctggcggacatcaacaacgccgccaagctggtggcgctgaagcag
ctgctgctcgactgcggcatcggcgccgccgccgactcgacgggcaccggcggcgcgcag
gcggtggtgcccgtcgtcaaccagcaccgggcgctggtcttctgccagctgaagggcatg
ctggacattgtggagaatgacctgctgaaggtgcacatgcgctcagtcagctacctgcgt
ctggatggggatgtgcccgccaactcgcgctactcggtcattcatcgcttcaacaatgac
ccctccattgacattcttctgctcaccactcaggtgggcggcctgggcctcaacttaacc
ggtgcggacactgtgatatttgtggagcacgactggaatccgatgaaggacttgcaggcc
atggatcgagcccatcgaattggccagaagaaggtggtcaatgtttatcgactaatcact
accggcacgttggaggagaagattatgggtctgcagaagttcaagttaacgatcgccaac
acggtgatatccagtgagaactcaagtctcgactcaatggccaccgaccagctgctggac
ttgtttgacggcggcggcggcggtcactcctcgtccagtgccggcggaaaggcgcccgtc
tccatgaagatgatgctggacaatcttcccgagttgtgggacattcagcagtacgagaat
gagtacgatctgaacaactttatgcagtcgctgcagtcgtcgagcagtggctga
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integrated database retrieval system
