Rhagoletis zephyria (snowberry fruit fly): 108363982
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Entry
108363982 CDS
T08513
Name
(RefSeq) probable ATP-dependent RNA helicase DDX20
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
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Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
108363982
NCBI-ProteinID:
XP_017473008
LinkDB
All DBs
Position
Unknown
AA seq
1040 aa
AA seq
DB search
MEAGNVAHSLEGKVRTEDIKLKELAPFSKMLLSESVRKGLQKTGFVYPTAIQAMSIPMGK
SGLDLLVQSKSGTGKTLIFCTIILEAYRMDLLEPQSLIVVPTREIAIQIEMVLNQIGSCC
SNFRAVSVIGGLDVAEDRKRLQSAKAVVGTPGRLLHLIQNNVLNTSKMRLLVLDEADKMY
TQSFRQDLRRIQNALPAKKQTIACSATFCDGLDKELAKIMRNPLLISTEERATLLVGIKQ
FAYEIPEQKTSILEMQSKLEGLRVIFGRVAFKQCLIFAGSQSRANSYCNYLEKEGWPCEL
ISGAQDQKTRLAMFHKFREFKSRIIITTDLMSRGVDSEHVNLVINLELPNDMVTYLHRIG
RAGRFGSHGIAINFVASEKDRCTLTRLISRIGNGMNVLKFPQRQIAQTEQEYDIWDFSNL
EKDQNYFGQFGCEPLAPLASQDHSSFSDTQENKENQTDNFINTSSSIDTNTFRVDSKDSA
LNIQENLLERPECNHLILSPSHKLTIDSRQGSSQQLPSSNTIDDASSIAADSLRSSQQDI
SRYQSVLMQKAAIPTLFEFLVDPNSCESQMDAKEGEAKKKPPIDLFDDYKKAVLTNSDNS
LKETEETGLESHISNKITAYKSMLIDQPVQNNLAENKHDIYSDYANFNAEEYSSSLSQET
GSNEIDKGTFILSVATPSRMQDSIEEFVNTTETASDLKNSQSISESLEVSEVKHFTSPAH
NQPNNTIPDVVPPCQRMSYNLKHIHNLTVNVGAQIEIPPHQQSHSDSPALNDSVLRSREE
DPSPTISASNSLNSRSNSERGGSSGFNERNTTSASSGIVTSDTEPERYVQNGYYSSSETG
TGSSYEVDPELLFPYPDSSKESGGDDEDEENDVEIEGEDEYEENDDDIEDEYKDEENDDE
IEEEDEMGNDEEVEDEEYDQDEVEENYEEENDRESNSKTAEIDSEVATSTKKRTEDSVSK
GKDSAEGTNKTKHSKTQGGKNSSEKAKETQNDTQWSQYNFYGSEYEAAHALWMEIYWTQL
RQIQEYVQMTRDVGKSEDKK
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atggaagcaggaaatgttgcgcatagcctggaaggtaaagtccgaacagaggacataaaa
cttaaggaactggccccgtttagcaaaatgttgctgtcagaatcagtacgcaaagggttg
cagaaaacaggatttgtataccctacagctattcaggccatgtcgattccaatgggaaag
tcgggactagatctacttgtacaatcgaaatcaggaaccggaaaaactttaatattttgc
acgataattctagaagcttaccgaatggatttgctagagccccaatcattgattgtagta
cctacgagggagatcgccatacaaatcgaaatggtgctaaatcaaattgggagttgctgc
agcaatttccgtgctgtgagtgtaattggaggtctagatgtcgctgaggatagaaagcgt
ttacaaagtgccaaagctgttgtgggcactccaggacgattacttcatttaatccaaaac
aacgtgcttaatacctcaaagatgcgattgttagtgctggatgaggcagataaaatgtac
acccaatcttttcgacaagatctgcgtcgtatacaaaatgctttgccggcaaaaaagcaa
actattgcatgtagtgcaacattttgtgacggcttagataaagagttggcgaagataatg
cgtaatcctctactaatttcaactgaggaaagagctacgctattagttggaattaaacaa
ttcgcctatgaaatcccggaacaaaaaacgagtatattagaaatgcagtcaaaactagaa
ggccttcgggttatttttggacgtgtagcatttaagcagtgtttgatatttgctggctcc
caatcgcgcgccaactcctactgcaactatttggaaaaagaaggttggccttgcgaactt
atttctggcgctcaggatcagaaaactcgactcgcaatgtttcataaatttcgagaattc
aaatcgagaattattataacaaccgatcttatgtcccggggggttgattccgagcatgtt
aacctggttatcaatttggaactaccgaatgacatggtaacttatttgcatcgtattgga
cgggcaggacgttttggttcgcatggcattgctattaatttcgttgcttctgagaaagac
cgttgcacattaacacgtcttatatcgcgtattggtaatggtatgaatgttctaaaattt
ccacaaagacaaattgctcaaactgagcaggagtatgacatttgggatttttcaaatttg
gaaaaagatcaaaactactttggccaatttggatgtgagcctttagcacctttagcatct
caggaccacagttccttttcagatacacaagagaataaagagaatcaaactgataatttt
attaacacaagttcatcaattgatacaaatacttttcgcgtagactccaaagatagtgca
ctaaatatacaggaaaatcttttagaacgacctgaatgtaaccatctaatactctcccct
tcacataagcttaccatagactcacgccagggttcttcacagcaactcccttcttcgaat
accattgatgatgctagtagcattgccgcagacagtcttcgtagtagccaacaagatatt
tctcgataccaatctgtgctaatgcaaaaagcggctattcctacactattcgaattccta
gtcgatcctaatagctgtgaaagtcaaatggatgctaaagaaggcgaagctaaaaagaaa
ccgccaatagatttgtttgatgactataaaaaagcagttcttacgaattctgataattca
ttgaaagagactgaagaaactggattagaatcacacatatctaacaagataactgcttat
aagtctatgcttatcgaccagccagtccaaaataacttagcagagaataaacatgatata
tattctgactatgccaatttcaatgctgaggaatattccagcagcctgagccaagaaact
ggttccaacgagattgataaaggaacttttattctttcggttgcaacgccttcaagaatg
caggattctattgaagagttcgtcaatactacggaaacagctagtgacttgaaaaattca
caatctatatcagagagtttagaagtttctgaagtaaagcactttacttcaccagctcat
aatcaaccaaacaatacaatacctgatgttgttcccccttgtcaacgtatgtcgtataat
cttaaacacattcataatttaacagtaaatgtaggtgcccagattgaaattccgccacat
caacaatcgcattctgactcacctgctctaaacgattccgttttacgttcccgtgaggaa
gatccgtcccctacgattagtgccagtaattccttgaattctcgatcgaattcggagcgt
ggaggaagcagtggcttcaatgaacgcaataccactagcgcttcttctggcattgtaaca
tctgataccgagcctgaacgttacgttcaaaatggatattattcgtcctcagaaactgga
accgggtccagctatgaagtcgatccggaattattatttccctatccagattcaagtaag
gaatctggaggggacgatgaagatgaagaaaacgacgtcgaaattgaaggggaagatgaa
tatgaagaaaacgacgacgacattgaagacgagtataaggatgaggaaaacgacgatgaa
attgaagaggaagatgaaatgggaaatgatgaagaagtggaagatgaagagtatgatcaa
gatgaagttgaagaaaattatgaagaagaaaatgaccgcgaaagtaatagcaagacggca
gaaattgattctgaagtcgcaacatcgaccaagaaaagaacagaagatagcgtttcaaaa
ggaaaagatagcgcggaaggaactaacaagacaaaacattctaaaacacaagggggaaag
aattcttcagaaaaagctaaagaaactcaaaatgacacccaatggtctcagtataatttt
tatggtagtgagtatgaagcggcacatgctctatggatggaaatatactggacacaactg
cggcaaatacaagaatacgtgcaaatgacacgtgatgtgggaaagtcagaggataaaaag
taa
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