Rhagoletis zephyria (snowberry fruit fly): 108363987
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Entry
108363987 CDS
T08513
Name
(RefSeq) cohesin subunit SA-1 isoform X1
KO
K06671
cohesin complex subunit SA-1/2
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rze03036
]
108363987
Chromosome and associated proteins [BR:
rze03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
108363987
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
Motif
Other DBs
NCBI-GeneID:
108363987
NCBI-ProteinID:
XP_017473014
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All DBs
Position
Unknown
AA seq
1120 aa
AA seq
DB search
MMARRGGKRIRMNDPPPEYEEHGEVLNESTSDGDSPMKRMTRLRARGGVRDKPPIIDDDE
DDFFIPVARKRKPPGTRKPPGERRERVERPRKEHIEKEQERIDMERDVTTDENSLYFIVR
HSKSAIASIVDDWIEKYKQNRDSALIALMQFFINASGCKGKISEDMPHPMEHTAVIRKMT
EEFDEESGEYPLIMPGQQWKKFKMNFCDFVQTLVKQCQYSIIYDQFLMDNVISLLTGLSD
SQVRAFRHTATLAAMKLMTALVDVALLVSNNFENAAKQYEAERVKSRDRRASDRLESLMT
KRAELEENMDEIKNMLTYMFKSVFVHRYRDTLPDIRAICMAEIGVWMENYPQNFLDDSYL
KYIGWTLHDKVGEVRLRCLQALLPLYDKEELKGKLELFTSKFKDRIVAMTLDKEFEVAVH
AVKLVISILKIHPDILADKDCEIVYELVYSSHRGVAQAAAEFLNVRLFHLTADMEETKTR
RGKIRLPNTPLIRDLVQFFIESELHEHGAYLVDSFIDNNAMVKDWACMTDLLLEEPGINE
EVLDNKQESTLIEIMVSSVKQSATGEAPVGRASNRKITLSSKELKAIQDEKIRLTEHFII
TLPPLLEKYQADSEKLANLLAVPQYFELDIYTTNRQESNLQALLDKMSYIMSVHTDREVL
ETCAKTLEYLCSEGSATYTRCDVARSNIIDNAVNKYKDAIDDWRNLIAGEELPNEDEIYN
VTISLKVISILYASHNLNIWSLFDSIFQDVEECQSKENPGRTLPNEALVYCIEACYFSIS
WGLYFVENQCESSNIPVVCAELRDNMVKYMAACIELTRNGPSEQIQESAYQSVCDLLIVF
SDQLSKNEDENIRALEYKSTLDEQLILNNFIQHYVFTIKPEVVQDETRIEELHKKRNFLA
SFCKLVVYNIIPTKSAAGMFKHYVKCYNEYGDIIKATLGKAREINKVNFALTLLLSLIAV
FKDLQQQSENSVISKNSHEFSDLKELAKRFALTFGFDAIKNREQVIALHRAGILFAVGDI
PEDPVAAPTRLLFLEVLNEFNNKLLKQDKKVILNFLDRRISPGMPSSRAEEWQPLVLYRN
SLLHGETDQAPVAKRAYARKRREHDDEDEEEEYEEDHNDA
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgagacggggcgggaagcgaattcgtatgaatgatcctcccccagaatatgaa
gaacatggggaagtgttgaatgaaagtacatcagatggagatagccctatgaaacgaatg
acacgtctgcgtgctcgaggaggagtgcgtgacaagccgccaattattgatgacgatgaa
gacgacttttttatacccgtggcacgtaaacgcaaaccgcccggaacacggaaaccgcct
ggtgaacgccgggagcgtgtggagagacctcgaaaggagcacattgaaaaggaacaggag
cgtattgatatggaaagagatgttaccacggatgaaaacagtctatatttcattgtgcgg
cattccaaatcggcaatagcgagtattgttgatgattggattgagaaatacaaacaaaat
cgtgattctgccttaattgcactaatgcaattttttataaatgcaagtggttgtaaaggc
aaaatatctgaagatatgccacatccaatggaacacactgctgtgatacgcaaaatgact
gaggaatttgatgaggaaagcggcgaatatccattgataatgcctgggcagcaatggaaa
aaattcaaaatgaatttttgcgactttgtgcaaactttggtaaaacagtgtcaatattct
atcatttacgatcagttccttatggataatgtgatctcacttttgacgggtctctctgat
tcgcaagtgcgtgcattccgtcatacggctactttggcggcaatgaagttaatgacagcg
ctggtggatgtagcgttgcttgtctcaaataacttcgaaaatgctgcaaaacaatacgaa
gctgagcgcgtcaagtcgcgagatcgccgtgcatcggatcggttggagtcattaatgacg
aaacgtgccgagcttgaagagaatatggacgaaattaaaaatatgttaacatatatgttt
aaatccgtatttgtgcatcgatatagggacaccctgccggatatacgtgcaatttgcatg
gcggaaatcggcgtctggatggaaaattatccacaaaatttcctcgacgactcatatcta
aaatacatcggatggacattacatgacaaggtcggtgaagtccgccttcggtgcctgcaa
gcgctactaccgttatatgacaaagaagaactgaagggaaaattagagttgtttacttct
aaattcaaagatcgtattgttgccatgaccctggataaagaatttgaggtggcagtacat
gcggttaaattggtgatcagtattttaaaaatccaccctgacattttggccgacaaggat
tgtgaaatagtgtacgagcttgtatattcatcgcatcgcggagtagcccaggctgcggcc
gagtttttgaatgtacgactttttcacttaactgccgatatggaagagacaaaaacgaga
cgtgggaaaatacggctaccaaatacacccctaatacgagatttagtacagttctttatt
gaatctgaactgcacgaacatggtgcctacctggtggactccttcatagacaataatgcc
atggtcaaagattgggcttgtatgaccgatctacttctcgaagagcctggcataaacgaa
gaggtgctagacaacaagcaggagtcaacacttatcgaaataatggttagcagcgtgaag
cagtcagcgacaggtgaagcgcccgttggacgcgcaagtaatcgtaaaattacattaagt
tcaaaggaacttaaggcaatacaagatgaaaaaatccgactgactgaacattttattata
acactgccgcctttattggagaaataccaggcggacagtgaaaaattggcaaatctgctg
gcagtgccacaatattttgaattagacatatataccacaaatcgacaagaatctaacttg
caggctttgttggataaaatgagttacataatgtctgtacatacggaccgagaagtactc
gagacctgcgctaaaacactggagtacttatgcagtgagggtagtgcgacatacactcgc
tgtgatgtagcacggtcgaatattattgacaatgcggttaataaatataaagatgccatt
gatgactggcgaaatttgattgctggtgaagaactacccaatgaagatgaaatctacaat
gtgacaatatcactcaaagttatttctatcttgtacgcttctcataatctcaatatttgg
agtttatttgattcaatattccaagacgtggaagaatgccagtcgaaagagaatccgggg
cgcactttacccaacgaagcgttagtctattgcatcgaggcgtgctacttttcgataagc
tggggcttatactttgtagaaaatcaatgtgaaagcagtaatatacctgttgtatgcgct
gagttgcgtgacaatatggttaaatacatggcagcatgtatcgaactaacacgtaatgga
ccatcggaacaaattcaagaatcggcctaccagtctgtatgtgatcttctgatagtattt
tcggaccaactttctaaaaatgaagatgaaaatatacgcgccttggagtataagtcaaca
ctggacgaacaattaattttaaataattttatccagcattatgtttttacaatcaaacca
gaagttgttcaagacgagacacgaattgaagaattacacaaaaaacgtaacttcctggcg
tccttctgcaaattggttgtctacaatataatacccacaaagagtgcagctggaatgttt
aaacactacgtgaagtgttacaatgagtatggcgacatcattaaagccacacttggaaag
gcacgtgaaataaataaagtaaacttcgccttgaccttactgctcagcttgattgctgtt
tttaaagacttgcagcaacagtctgagaatagtgtaatttcaaaaaattcacacgagttc
tctgatcttaaggagttggccaaacgttttgcactgacttttggttttgatgctattaag
aaccgtgaacaggtcatcgccctgcatcgagctggcatactttttgccgtcggtgatata
cctgaagatccagtagcagcacctacacgacttttattccttgaagtgttaaatgaattc
aacaacaaattgttaaaacaggataaaaaggttatattgaatttcctcgatcgccgaata
tcgccaggtatgccatcgagcagagcggaagaatggcaaccgcttgtactgtataggaat
tccttgctgcatggcgaaaccgatcaagcgcctgttgcgaagcgggcttatgcgcgaaag
cgaagggaacacgatgacgaagacgaagaagaggaatatgaagaagaccataatgatgcc
taa
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