Rhagoletis zephyria (snowberry fruit fly): 108364024
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Entry
108364024 CDS
T08513
Name
(RefSeq) host cell factor-like isoform X1
KO
K14966
host cell factor 1
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03083
Polycomb repressive complex
rze04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
108364024
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
108364024
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rze01009
]
108364024
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rze03036
]
108364024
03029 Mitochondrial biogenesis [BR:
rze03029
]
108364024
Protein phosphatases and associated proteins [BR:
rze01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108364024
Chromosome and associated proteins [BR:
rze03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
108364024
HMT complexes
COMPASS/SET1 complex
108364024
MLL-HCF complex
108364024
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
108364024
Mitochondrial biogenesis [BR:
rze03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
108364024
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Kelch_3
Kelch_5
Kelch_4
Kelch_1
Kelch_2
Kelch_6
Motif
Other DBs
NCBI-GeneID:
108364024
NCBI-ProteinID:
XP_017473060
LinkDB
All DBs
Position
Unknown
AA seq
1320 aa
AA seq
DB search
MESSDLISTSDMTTASTSEIESVQQETSLVRNRNNNGANCDNMEVEIENFIDDGNNANNN
NAKRFRWKRLSNPSGPQPRPRHGHRAINIKELMVVFGGGNEGIVDELHVYNSVTNQWFVP
AMRGEVPPGCAAYGFVVVGTRMFVFGGMIEYGKYSNELYELQATKWEWRKMNPELPDNGP
APCPRLGHSFTMVGDRIFLFGGLANESDDPKNNIPKYLNDLYILETRAVHSHNGKWIIPK
TYGESPPPRESHTGVAFTSKTTNKLNLLIYGGMSGCRLGDLWLLDVDSMTWSKPRTRGHA
PLPRSLHSATMICNKMYVFGGWVPLLINDSKATTEREWKCTNTLAVLDLDSMTWENVTVD
TVDEDVPRARAGHCAVGIQSRLYVWSGRDGYRKAWNNQVRVCCKDLWYLEATRPLYAVKV
GLVRASTHALELCWTATTFATAYELQTQKIEPATIATKVVTPSSITPSASSTSVATNQIS
TNGLPPNTIQPSPVLTTTTTKHQKIHNAALPSVCLQQSTTKVLNNPIIQQQQTQQQSQSS
QQQTHLQGATIYIAQQHVPQTQQIGQIKANIVSSAPSIAENTLSATRILNTSTPTIVNSS
TQVSATLVNVSQQQPTVSIVNSNITTILQKFRPNTVVARTSAVTTPINTGTIAVSSAVHS
NAGASNLRVVSAAGIPVTTTAPANTVRIVSGNTGQTLRLATSHTTANTTATILKTSQTIG
NTIAGQIQNSSVANAGNSIATATTIGGKQYIIQKPLTLGSNVQFQLVKTSTGGVAVQTLP
KINLNLAKNTGTSGTLAAVGSQQVSAGGQIVTATQVVGSTAGSQPQQQFNVNCSTSVAST
GSTSGQQKPLVSGNLVKLVSPHTVSGGKLIMKNSNILQVGKVSSNVAGKPAFVITNKQGQ
QLTNQQIIIVTTGAGIRTIPASSVMTQAGAGSIVSIVGSTSTTATVATNRNVVSTQTGVK
MIRGVTSTTGRPITLTLPSTTQLSQQQQHVTSQQHQQKVSVPSSNVQQKTITLGGKAVTV
QMASNPNVTGMAKTVTIVGSSSGHTQPQTIVTSGIAGNTGSKLVMLPSNTTTVNKKGFVN
ILNASGTSNTSGNTMQRAIKLTSKNVVGVTNSQIGIATHVNNDGSNEATVAIASLTDPNY
AEGDTMDDIIEQLDGAVGSFVGYDHVETEDIDDGSASILAPVTMNDIGDEAKEKNKCSKF
NKYEGKCLRNEIFNFYTGDISSSFEPDSKKTKDDTLSYINGGSKTEFGQEDTRIPVPNLH
FTNKSVQQVSTSNHVTNCHKPQYPHVGCDSLVAQPKYLYILPAYNNAQAPKFPDTSNSFC
NT seq
3963 nt
NT seq
+upstream
nt +downstream
nt
atggagtcttctgacttgataagtactagcgatatgactactgcaagtacttctgaaatc
gaatcagtgcaacaagagacgtcattggtcagaaatcgtaacaacaatggggctaactgc
gacaacatggaagtcgaaatagagaactttatcgacgatgggaacaatgcaaacaacaat
aatgccaaaagatttcgttggaaacgcctaagcaatccatctgggccccaaccacgtcca
cgccatggacatcgtgctataaacataaaggaattaatggttgtttttggaggcggcaat
gagggtattgttgacgaacttcatgtatataattccgtcaccaatcaatggtttgtaccg
gccatgcgtggtgaagtgccacctggttgcgctgcatacggcttcgttgtcgttggtacg
cgcatgttcgtttttggtggcatgatagaatatggcaaatattctaatgaactttatgag
ttacaagctacaaaatgggaatggcgcaagatgaatcccgaattgccagataatggacct
gcgccttgcccgcgcctgggccatagttttactatggttggtgatcgtatttttcttttt
ggtgggctggccaacgaatctgatgatcccaaaaacaatatacccaaatatctcaacgat
ttgtacatattggaaactcgtgcagtgcacagccacaatggcaagtggatcataccaaaa
acttacggagaaagtcctccaccacgtgagtctcacacgggcgtggcttttacgagcaaa
actacaaataagctaaatttgttaatatatggtggcatgagtggctgtcggttgggtgat
ttatggcttttggatgttgattctatgacatggtctaagccgcgtacacgtggtcatgca
cctttacctaggtctctacatagcgctacaatgatctgtaataaaatgtatgtttttggt
ggttgggtaccattactaataaacgactcaaaagcaacaactgaaagagaatggaaatgt
acaaataccctggcagttcttgatttggattcaatgacatgggagaatgtaacagttgat
acagtagatgaagacgtgccaagagctcgagctggtcattgtgcagtgggcattcagagt
cgtttatacgtgtggtctggccgtgatgggtatcgtaaagcatggaacaaccaggtcagg
gtttgctgtaaagacctctggtatttagaagcaacaaggccactgtatgcagttaaagtt
ggtttggttcgtgcgtctacgcatgctttagaactatgttggacggctacaacatttgcg
acagcatatgagttacaaacacaaaagattgagccagcaactatagcgactaaagttgta
acaccatcatcaattactcctagtgcctcatctacgtcagttgccacgaatcaaatatcg
acgaatggactgccccccaacacaattcaaccttccccagtattgactaccacaactacg
aagcatcaaaagatacacaatgcagcacttccttcggtttgtttacaacaatctaccaca
aaagtgctgaataatcctattatacagcagcagcagactcagcaacaatcacaatcttcc
cagcagcaaacccatttgcagggcgcaaccatttatatagcacaacaacatgtgccacaa
acacaacaaatcggtcaaatcaaagcgaatattgtatcttctgcgccaagtattgcggag
aatacattatcggctacacgcatattaaacacatcaacgccgacaatagtaaattctagc
acacaggttagtgccactttggtaaatgtatcgcagcagcaaccaactgtttcaatagtg
aatagcaatataactactatactacaaaagttccgaccaaacactgttgtggctcgtact
tcggccgtaacaacaccaattaatacaggcacgattgcggtatcatctgctgtgcactca
aatgctggtgcttcgaatctacgtgttgtaagtgcagctgggataccggtaacaacaaca
gctccagccaatactgtaagaattgtatcaggaaatactggacagaccttacgtctagct
acctcacataccacggccaacactactgctactatattaaaaacatctcaaactatagga
aatacaatcgctggacaaatacaaaacagttccgttgcaaatgcaggaaattccatagct
accgccacaacaattggtggcaagcaatatattatacagaaacctttaacattaggctca
aacgtacaatttcaattggttaaaaccagcactggaggcgtggccgttcaaacactgccg
aaaattaatttaaatttggctaaaaataccggtacttcaggaacattagctgccgttggg
agtcagcaggtttcggctggcggacaaattgtaacagcaactcaagtagtcggtagcact
gcgggctcacaaccccaacagcagttcaatgtgaattgtagtacatctgttgctagtaca
ggttctactagcggccagcaaaaaccgctggtatctggcaatcttgtaaaattggtttca
ccgcataccgttagcggcggaaagttaataatgaaaaattctaatattctccaggtggga
aaagtttcttctaatgttgctggtaaacctgcatttgttatcaccaacaagcaagggcag
cagttaacaaatcaacagattataattgtcaccactggtgctggtatacgaacaataccc
gcatcgagtgttatgactcaagctggtgctggtagcatcgtttcaatagtgggttcgaca
tcgaccactgctacagttgcaactaacaggaatgtggtatccactcagaccggtgtcaaa
atgattcggggagtaactagcacaaccggtcgacccattactttaacactaccttcaaca
acacaattgtcacagcagcagcaacatgtaaccagtcaacagcatcagcaaaaagtgagt
gtaccatcttcaaacgttcagcaaaaaactataacactgggcggtaaggcagtaacggtg
cagatggcttctaatccaaatgtgactggaatggctaaaactgttacgattgttggttca
agttctggacatacccaaccccaaaccattgttaccagtggcattgctggcaacacaggt
agtaagttagtaatgctgccttcgaatacaactacagtaaataaaaagggtttcgtaaat
attttaaatgctagcggtacaagtaataccagtggaaataccatgcagcgcgcaattaaa
ttgacatcgaaaaatgttgtgggtgtaacaaattcgcaaattggcatcgcgacgcatgtc
aacaatgatgggtcaaatgaagcgaccgttgccatagcatcattgacagatccgaattat
gcagaaggtgacactatggacgatataatcgagcaactagatggcgccgtaggctctttc
gttggttatgatcatgtggaaaccgaagatatagatgatgggtctgcaagtatattagcc
ccagtaacgatgaatgacattggcgatgaagctaaggaaaaaaataaatgcagcaaattc
aacaagtacgagggaaaatgcttaagaaatgaaatttttaatttttataccggtgacatc
agttcatcgttcgaacccgattcgaaaaaaacgaaagatgatacattaagttatattaac
gggggtagtaaaaccgagtttggtcaagaagatactcgtatacctgttccaaatttgcat
tttaccaataaaagcgttcagcaagtctcaacatctaaccacgttaccaactgtcataaa
ccacaatatccccatgtaggctgtgattcgttagtagcgcaaccgaagtatttatacata
ctaccagcttataataacgcccaagctcctaagtttccagatacttcaaactcattttgt
tga
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