Rhagoletis zephyria (snowberry fruit fly): 108364061
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Entry
108364061 CDS
T08513
Name
(RefSeq) E3 ubiquitin-protein ligase hyd isoform X1
KO
K10593
E3 ubiquitin-protein ligase EDD1 [EC:
2.3.2.26
]
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108364061
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rze04121
]
108364061
Enzymes [BR:
rze01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
108364061
Ubiquitin system [BR:
rze04121
]
Ubiquitin ligases (E3)
HECT type E3
108364061
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
MLLE
zf-UBR
PABC_AtC3H46
Motif
Other DBs
NCBI-GeneID:
108364061
NCBI-ProteinID:
XP_017473114
LinkDB
All DBs
Position
Unknown
AA seq
2483 aa
AA seq
DB search
MYNISWYMLNKLVYNIFYFILIKDLKKKDTSSSPIWISEELQPWTNQNGITKFKKIAALY
SEFIALSESGDLYQWKWSEMEPYKSEMENVYHPKTSSLNITEKVQQISANFIRCSVVSES
GRVASWMDDHLGYLGAKFEHSAIMFNEFAVDPIASIHVCSLYTAVRTENNHVYWWGVLPF
DQRRYLWDKFRTKAKKPFKSVTSDISVGTQVVMKKCPIYQAGSIGFTCSNGIPKIGQLQN
SVWDLSDVCRFKIINNLTQTCTEKSQLSACLVSTEKECIKTSLSSNAANTQPSSSKTISS
TKETTDRIDMPPPPSPASSTCSDTGSVTSHKRVKRMTAKDDIENKKDEELWQLRDVVFVE
DKVGPVGKVLKVDGDFVAVRFPVSTNTTAGSVCGSGGEGKDDDWQQCRLLRREDVQIYKT
NMTSRGPDWLQKLPRKVNISNCHDPNGYQLLAMAVDVRGIHVIKKSACKLFYSLYNLYNS
KQEQSCQFPTDSVSFLGASPNNISIICSNDSNDSNSNIIVCDGNRTLYPIAKDCLGSIKD
PQWLDLPPVKNVSMGMIPLSAAGNVKSKLCLAALLFQSQKLMPHILRCDVKNAFALLSHL
EKEERNEIVAIAEERCDGGRNVFHACVVMCAPTSNKEPEEKKSFSALGRSTPLANTIFSN
CTNLSTHLDVNSSAPTASAGASSSNVARESRSVSLREMMNRLINTDPEPNGTGHSVGSVD
EQMYIPQWPVEGNSSNPVANDVTSGEAEDELSKSFSAPSHINASTSVSSPNYVFEPMQRR
EHALLILQQMCLSATFRPYLYQMLSSKDSQGRTPFMISVYTRAYEAGIILLNTILNLSEK
DSLLKNSMIFPSGSPPDQSPLYVMCYNDTCSFTWTGADHINQNIYECKTCGLTGSLCCCT
ECARVCHKGHDCKLKRTSPTAYCDCWEKCKCKALIAGNQNKRFALLCKLASCTDLVTRFN
SKGESILLFLIQTVGRQTVEQRQYRANSRVRNVGSSGTNSNSRKSSSIDIEADMPEHDLE
PPKFARKALERLLIDWPAVRAMIMTGAEKFESSSHPHPNATIDASNTEGYNMYLQSQQGS
TLLDKFTHNLFVKCGGDHLETLLMTLVREMHDGITPGRREDAELVTRRFVRSVVRVFVIF
TLEKMPNPERRKSNLSSHKHIQSCVKVFQSLYKISIEELCEVSESLISPVRLGIVRPTAP
FTMSSTSLDSSDDLFSVEPLAPSTTTETLTDPVSNHDGNLNPTSGYNIQSNFSIDNIEVL
RDAQESEEANTRDNSNLGQEEDILDSARHDEVIQDDESDNDFPFNDPETESDSDDNQSNQ
DAQRSVQTGATVGSETDIGVLFLEDESGDSSPQEEEASEDGETDEHSDEFNFADHQLERR
NISANVRSDLAPQSMQWAIRSRDTARSSVRVPAGSNLVFIDPMALRRSTVPASSTVTVPP
QEQHTMATTASNLARAFGIIVRQISDLLNNLACQLTSDVEKPTYKTQIGEAIQLQIYIEN
RLKGTWDWMYSIMDGTEPQLKFGAYLANFTDPSHPLHPLNLNAQNSSSQTNSSSAGINMI
GSSTRRDFFTYCLSLMRAHTSEHRDALPVLDITAFRHIAYVFDGFIYYMRNNTSFYEKVD
QCSNINIPNTNENEDIDDEFSNVTNEEIFVESNSSTATAVPLSATTRRHSFFVRSESTIS
LGCLAPESFDLPLDVAIPLADKPHLLQPNSKREDLFANIPLLSSTVENLTTVGNLTAAPT
KLGFSSYRSINTTENIQEDKKIEINPGLENDEEMDTGEQITATEIEASVSKSAHSNRPDV
IITPNKIQKTDEMVGPTTILSPTSTSRTVIVRAISIIKKPENEKSNTHFTLPDDFKRTNI
SANTFPPRGIHFCKQISSVTPSWNILLGRWKLTLDLFGRVFMDDVGMEYGSLLPELRGFP
VKEMRFRRHMEKLRNGQQRDLILCKLERNRESLIIQTFKELNAQFGSQTRRTQTPLTFNR
VKVTFKDEPGEGSGVARSFYTSIAEALLATAKMPNLESTHIGVNSKYGAPFSSILRNRGT
SNREPPTLQRRATGNKIFWRTSRERKLLNHDARPYLPTTTITDSSQDNSNDHLSVHLQQL
GERLFPKIYSINPTNASKITGMLLEIPTPQLLSILSSEDTLRQKINEALDIIAYKQKSDA
NNASTQTQKKMIPVVLLEQCQIEDSDPLFYSPGKRGFYTPRQGYGSFERINAFKNIGRLI
GLCLLQNELLPLFLQRHVLKFILGRKIKFHDLAFFDPIIYESFRQLIQNAQSDDGDGIIQ
RMELFFVIDLMKEEGGGSVELLPGGREIQVTSSNLFEYLRRYTEYRLIKSQEKALEALKD
GVFDVLPDNCMNSLTAEDLRLLLNGVGDINVSTLISYTTFNDESSEGSDKLLKFKRWFWS
IVEKMNSSERQDLVYFWTGSPALPASEEGFQPLPSVTIRPADDSHLPTANTCISRLYIPL
YSSKTILRSKVLIAIKSKNFGFV
NT seq
7452 nt
NT seq
+upstream
nt +downstream
nt
atgtataacatctcgtggtatatgctaaataagctggtgtataatattttttattttatt
ttaattaaagacttgaaaaaaaaggacacatcaagctctccaatttggatatcggaggaa
ctgcaaccatggactaaccaaaatggcataactaaattcaaaaagatagcagcattgtat
tctgaattcattgcactttcggaaagcggagatctataccagtggaaatggtcagaaatg
gagccttacaaatccgagatggaaaatgtgtatcacccgaaaacttcatctcttaatata
acggaaaaagtacaacaaatttccgcaaattttattcgctgttcagtagtatctgagtcc
gggcgtgtagcatcttggatggacgatcatttgggatacttgggagctaaatttgaacat
tctgctataatgtttaatgaattcgctgtagatcccatagcatcaattcatgtctgctcc
ttatatactgcagtaagaacggaaaacaaccatgtttattggtggggtgttttacctttt
gatcaacgccgttatctttgggacaaattccgtacaaaggctaaaaagccatttaaatcc
gtaacctctgatatcagtgtgggaacacaagtggtaatgaaaaaatgtcccatttatcaa
gcaggttcgattggatttacatgttccaatggtataccaaagataggtcagttgcagaat
tcagtttgggatctaagtgatgtttgccgatttaaaataatcaataatttaacacaaact
tgtacagaaaaatcacaattaagcgcgtgtttagtaagcactgaaaaagaatgtataaaa
acttctttatcatctaatgctgctaatacgcagccatcgagcagtaaaacaataagttct
acaaaggaaaccacggatcgcattgatatgccaccacctccttcgccagcctctagtaca
tgtagtgacaccggaagcgtgacttcacataaacgcgtaaagagaatgacagccaaagat
gatattgaaaataaaaaagatgaagaactttggcaactaagagatgttgtttttgtagaa
gacaaagtggggcctgttggaaaagtcttaaaagtcgatggagattttgtagcggttaga
tttccagtttctacaaatactaccgccggttctgtttgcggcagcggcggtgaaggtaaa
gacgatgattggcaacagtgtcgtcttttgcgtcgtgaagatgttcaaatatacaaaaca
aacatgacatctcgcggcccggattggttgcaaaagcttccgagaaaagttaatattagt
aattgtcatgatccaaatgggtaccaattattagcaatggcagttgacgttcggggcatt
catgtaattaaaaaatccgcttgtaaacttttctacagtttgtataatctatataatagt
aaacaggagcaaagttgtcaattccctacagatagcgtttcgtttttaggggccagccct
aataacataagcattatatgcagtaatgatagcaacgacagcaacagcaatattatagtt
tgcgatgggaatcgcacactttacccaatcgctaaagattgtttaggatcaataaaggac
ccccaatggcttgatttaccacctgttaaaaatgtctcaatgggtatgataccattatcg
gctgcgggaaatgttaagtctaaactatgtttggctgcattgctttttcaatctcaaaag
cttatgcctcatattttgaggtgcgacgttaaaaacgcattcgctctacttagccatttg
gaaaaagaagaacgaaatgaaattgttgccatcgctgaagagcgttgtgatggcggacgc
aatgttttccacgcgtgcgtagtcatgtgtgcacccacatcaaacaaagaacctgaggaa
aaaaaatctttttctgcccttggaagatcaacacctttagctaatactattttctccaat
tgcacaaatctttctacacacttggatgtaaacagcagtgcacctacagctagtgctggt
gcatcaagctcaaatgttgcgcgcgaaagtcgatctgttagtttgcgtgaaatgatgaat
cgtctgattaatacagaccctgaaccaaatggtacagggcatagtgtcggatctgttgat
gagcaaatgtatattccgcaatggccagtggagggaaatagttcaaatcctgttgcaaat
gatgttaccagtggtgaagctgaagatgaactttcaaaaagtttttcagctccttcgcac
atcaacgcatccacaagtgtatcatcaccaaattatgtttttgaaccaatgcagcgccga
gagcatgcactgttgattttacaacaaatgtgtttatctgcaacctttcgtccttattta
tatcaaatgctgagttccaaggattcccaggggcgaacaccatttatgatatcagtatac
acacgtgcctatgaagctggtataatactcctcaatacaattttaaacttatcagaaaaa
gactctttgcttaaaaattcaatgatattcccatcaggctcacctcctgatcagtctcct
ttgtatgttatgtgctacaatgatacatgctcttttacatggaccggagctgatcatatt
aatcagaacatatatgagtgtaaaacttgtggcctaacagggtcgttgtgttgttgtaca
gaatgtgcacgtgtttgtcacaaaggtcatgattgcaaattaaagcgaacctcacctact
gcttattgtgactgctgggagaagtgcaaatgtaaagcccttattgctggaaaccaaaat
aaacgttttgctctgttatgcaaattggcatcgtgtactgatcttgtaacaaggttcaat
tcaaagggagaatccattttgttatttctaatacaaacagttggtcgtcagacagtagaa
caaaggcaatatcgggcaaattcacgagtaagaaacgtgggaagcagtggaactaatagc
aattctcgcaaatcttcttccattgatattgaagcggatatgccagaacatgatcttgag
ccaccaaagtttgcgcgaaaagcccttgaacgattattaattgactggcctgcggtccgg
gctatgattatgactggtgctgaaaaatttgaaagttcatcccatccacacccgaatgcc
acaatagatgcttcaaatactgaaggttataatatgtatcttcaaagtcaacaaggctct
acacttttggacaaatttacacacaatttatttgtgaaatgtggaggagaccatctggaa
actctcttaatgacactagttcgcgaaatgcatgatggtattactccaggtcgcagagaa
gatgcagaattagtaacccgaagatttgtgcgatccgtggtacgtgtttttgtaattttt
accttagagaagatgcctaatcctgagcgtagaaaatcaaacttgagttcgcacaaacat
attcaaagttgcgtaaaagttttccagtctctgtataaaatttccattgaagaactgtgt
gaggtgtcggagtctctaatttctcctgtccgtcttggtattgttcgcccaaccgcaccg
tttacgatgtcctctacaagtcttgacagttctgatgatttatttagcgtagaaccactt
gctccatcgacaacaacggaaacgttaactgacccagtatcaaaccatgatggtaaccta
aatcctacctctggatataacatccaatcgaacttttcaattgataatattgaggtttta
agagatgcacaagaaagtgaagaagctaacaccagagataacagtaaccttggtcaagaa
gaggacattttagattctgctcgacatgatgaggttattcaggatgatgaaagcgataac
gattttccgtttaacgatccagaaacagaatccgactctgatgacaaccaaagtaatcaa
gatgcgcaacgaagcgtacaaactggcgctaccgttggttccgagacagatattggggta
ctttttctcgaagatgaatctggtgattcgtctcctcaggaagaggaagcttctgaagat
ggtgaaacagacgagcattcggatgaatttaattttgccgatcatcagttggagcgtcga
aatatcagcgctaatgtacgcagtgatttagccccacagtctatgcagtgggcgatcaga
agcagagataccgcccggtcttctgttcgagtaccagctggttcaaatttagtttttatt
gaccccatggcattacgccgttccactgtgccagcaagttccacggtaacagtgccaccc
caagagcagcatacaatggcaacaactgctagcaatctggctcgtgcatttggaataata
gttcggcaaatatcagaccttcttaacaacctcgcatgccaacttacatctgatgtcgaa
aagcctacttataaaacgcaaattggagaagcaattcagctacaaatatacattgaaaat
cggttaaaaggcacttgggattggatgtactcaattatggatggaacagaaccacagctg
aaatttggtgcctatttggccaattttacggatccctcgcatccgcttcatcctctcaat
ctaaatgcccaaaatagttctagccaaaccaattcttcatcagcggggatcaatatgatt
ggttcatcgactcgacgagacttttttacatattgtttatctttgatgcgagcgcatacc
tcggaacatcgtgatgctttacctgtcctggatataacagcatttcgtcacatagcttac
gtatttgatggatttatttactatatgcgtaataacacaagtttttatgaaaaggttgac
caatgttcaaatatcaatattccaaatacaaatgaaaatgaggatatcgatgacgagttt
tctaacgtaacaaatgaagaaatatttgttgagagtaactcatctactgccacggctgta
cctttatcagcgacaacccgtcgacattccttctttgttcgatctgaatcaactataagc
cttggttgtttggccccggagagcttcgacttaccattggatgttgctatacctctagca
gataagccacatcttcttcaaccaaattcaaagcgggaggatttatttgcaaatatacct
ttgctgtcttcgacggtagaaaatttaactacggtcggcaatttgactgcagctccaaca
aaactgggattttcaagttacaggtccataaacacaactgaaaatattcaagaagataag
aaaatagaaataaatcctggattggaaaatgatgaggaaatggatacaggtgaacaaatt
accgcaaccgaaatagaagccagtgttagtaaatccgcgcattccaatcgcccagatgtt
attattactccaaataaaattcaaaaaacagacgaaatggttggccccacaacgattctc
tcacccacatcaacttcacggactgttattgtgcgtgcgatctcaataatcaagaaaccg
gaaaatgaaaagagcaacacccatttcacattgccagacgatttcaagcgtacaaatata
tctgcaaatacttttccacctcgtggaatacatttctgcaaacaaatttcttcagttaca
ccctcttggaatattttacttggacgatggaaattaacgctggatctttttgggagggtt
tttatggatgacgtaggaatggaatatggatcattgctacctgaattacgtggatttcca
gtcaaagagatgcgttttcgaaggcatatggaaaaactacggaacggccaacagcgcgat
cttatattatgcaaacttgagcgcaaccgggagagtttaatcattcaaacatttaaggag
ttaaatgcccagttcggaagccaaacaagacgaacacaaacccctttgacctttaaccgt
gtaaaagtaacttttaaggacgagcctggcgaaggatctggcgtggcgcgcagtttttat
acatcaattgctgaagcactattagcaactgctaaaatgcctaatttggaatctactcat
attggtgtaaacagtaaatacggagctccgttttcgagtattttgcgaaatcggggaacg
tctaatcgagaaccacccacactacaaagacgcgctacgggaaacaaaattttttggcga
acctcgcgtgagagaaaactactaaatcatgatgccagaccatatctaccaactacaacc
attacagatagctcgcaggataactcgaatgaccatttatcagtgcatttacagcagctt
ggagaaaggctattcccaaagatatattctattaatcctacaaacgcgtctaaaataact
ggcatgctgcttgaaatcccgaccccacaattactatctattttgtcctctgaagatact
ttgcggcaaaaaattaacgaagcactcgacataatagcttataaacaaaaatcagatgca
aataatgcgtcaacccaaacccagaagaaaatgatacctgttgtgttactggagcagtgt
caaattgaagacagtgatccactattttattctccaggcaaacgtggtttttacactcca
aggcaaggatatggttcctttgaacgaataaatgcattcaaaaacattggaaggttaatc
ggattatgccttctacaaaatgaactacttccacttttcttacaacggcatgttttgaaa
tttatactcggaagaaaaattaaatttcacgatttggcctttttcgatccaataatatat
gagtccttcaggcaacttatacagaatgctcaatcagatgacggagatggtataatacaa
cgcatggagcttttttttgtaatcgatcttatgaaagaggaaggtggaggaagtgtcgaa
ttgctaccaggaggtcgggaaattcaagttacttccagtaatctatttgaatatttaaga
cgctataccgagtacagactgattaaatctcaggaaaaagctttagaggcgctcaaggac
ggagtatttgatgtgttaccagataattgtatgaacagtttaactgctgaagacttacgc
ttgcttttaaacggtgttggtgacataaatgtctctacgttgatatcttacacaacattc
aatgatgaatccagtgaaggatctgataaactattgaaatttaaaaggtggttttggagt
atagttgagaaaatgaattcatcagagcgccaagatttggtctatttctggacgggctca
ccagcattgccagcgtcagaagaaggatttcagcctttgccatcggtaacaataagacca
gctgacgattcgcatttaccaacggcaaacacatgtatatcaaggctgtacataccatta
tattcgagtaaaacgattttgcgtagcaaggtgcttatagctataaaatccaagaacttt
ggctttgtgtaa
DBGET
integrated database retrieval system
