Rhagoletis zephyria (snowberry fruit fly): 108364260
Help
Entry
108364260 CDS
T08513
Name
(RefSeq) enhancer of mRNA-decapping protein 4 homolog
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108364260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rze03019
]
108364260
Messenger RNA biogenesis [BR:
rze03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108364260
mRNA degradation factors
5'-3' decay
Decapping complex
108364260
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
WD40_Prp19
Beta-prop_EML_2
WD40
EIF3I
YpjP
Motif
Other DBs
NCBI-GeneID:
108364260
NCBI-ProteinID:
XP_017473347
LinkDB
All DBs
Position
Unknown
AA seq
961 aa
AA seq
DB search
MVRVVKAQSGLRALIKGMTGEVLDLQFAHIEKERILGSIDMNSLYIHKIDLVDGTLICNL
LVKIDDPLNNYSPKYDKISWCPFIDVPGEDDEDSQLIVWARGSMLQCFNINVIISEYGMG
VIQPNAISTGYLKVFDELCTISWVALSPDGSTLGVGSVDGVIRFYQVYMHDKEPRCLHQW
NPHNGKPISSFFFLDNLTKNVSETYWKYAITGAANNTEFKVWDCSTWQCLQSLSITTANE
EKKAPRFIAEIDRTSAYLVLSSLDTRTCYIMQIVNNSNNASASKGSDGNLANISNSSNSS
VGSFTSLSKNSPSLVYIKSISEFPLSSGILSFSIVDAAVRRYKCGNDNYLCDEFDDYDED
TNSTYCVVVRMFIVQSKSMQECRILYQPSVTENTDVRSTLSDENGEVIASKESSLLNSAI
SCMGSGGVKNDTIGMTSSLKINKLSHSLIKTEQLDEDNTKSENSSGLNSLESLLEIATIP
PVSLNNQISAQTAILSSVVAAPTAASAIPSAIPSVVTAENNDVGSRAASPQTTNKSFTQV
NLMTPDAFSSTSSDKKSPECVSSEVLNTILMLASVAGQTPAPKSESINILNLVNNKIIED
QEHQKLQLKQSLESQKKFIAISNNAAQHMDNLASGGSSPSREVQEIMSLQEHDSGDEELL
DETATTNKAKVDNQSDGKDLEVSSAKCHSTTNITNWPKVPELPKATTKQSTELQNAAHLI
SQAVNASSGNNLNNSHAAPNLISINSSNNGNLEGAGSKSNTDLTELNGKINELIELAKMQ
SMQINNLQAEISSMKKANPMSSTKSMSEFSFKLEMQLSKLMEQYLKRYENEHKKKLTAFM
AGREQQNRELRDSFIQIMNQYVLTHLGDVVSKVINIEIQRQLAPMLSAKIDHLQQQIQID
VAQKLTAFDLMLKDNISQVCKSKNIIDTFGKSVLVGVQGSLQAAFIESMSSTLIPAYEKI
W
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atggttcgtgttgtaaaggctcagtcgggactccgtgcactaatcaagggaatgacggga
gaagtccttgacctgcaatttgcgcatattgaaaaggagcgtatacttggttcgattgac
atgaactcactttatatacacaaaatagatcttgtggatggcaccttgatttgcaatctt
ttagtaaaaatagatgatccgttgaataattactctcccaaatatgacaaaatatcatgg
tgtccttttattgatgttcccggtgaagatgacgaagacagtcagttaattgtgtgggcg
agaggatcaatgttgcaatgttttaatataaacgttataatttcggaatatggaatgggt
gtcatacaaccgaatgctatttcgacaggttatttgaaagtatttgatgaattgtgcact
ataagctgggtggcattgtctcccgatggttcaactctaggcgtaggtagtgttgatgga
gttatacgtttctatcaggtttatatgcatgacaaagaaccacgatgtttgcatcaatgg
aatcctcataatggaaagcctatttcatccttcttttttttggacaatttaaccaaaaat
gtttctgaaacttattggaaatatgctataaccggcgctgccaataacactgaatttaaa
gtgtgggattgcagtacttggcaatgtctacaatccctaagcattaccacggcgaacgaa
gaaaagaaagcaccgcgatttattgccgaaatcgatcgaacgtcggcatatttagttttg
tcaagtttggatacccgcacctgttatataatgcaaattgtaaataacagtaataatgca
tcagcaagtaaaggttctgatgggaatttggcaaatatcagcaacagtagcaatagtagt
gtcggtagtttcacatcactttcaaaaaactcgccttcactcgtatatataaagagcatt
tctgaatttccattaagttctgggattctatcattctcaatcgttgacgctgctgttcgg
cgttataaatgtggcaatgataattacctatgtgatgagtttgatgattatgatgaggac
actaattccacctactgcgttgtggtgcgaatgtttatcgtgcaatcgaagagtatgcaa
gaatgccgcatactgtatcaaccctctgttacagaaaatactgatgtgcgaagtacctta
tccgatgaaaacggcgaagtgatcgcttccaaagagtcatcattattaaatagcgcgata
agctgcatgggaagcggtggtgttaagaatgacactataggaatgacaagcagtctcaag
attaataaattatcacattctcttataaaaacggaacaattggacgaagacaatacaaaa
tcagaaaacagtagtgggttaaattctttggagtcactactagaaattgcaacaatccca
cccgttagtttgaataatcaaatatccgctcaaacagcaatcttatcttccgttgtcgct
gcacccaccgcagcatccgccataccatccgcaataccatctgtggtgacagctgaaaat
aatgatgttggatcacgcgctgcttctcctcaaacaaccaataaaagcttcacacaagta
aatcttatgacaccagatgcatttagttcaacatccagtgataaaaagtcgccagaatgc
gtcagttcggaagtgctgaacacgattttaatgctagctagtgtagcgggacaaacgccg
gctccaaaatcagagagtataaatattttgaacttagtaaataacaaaataatcgaagat
caagaacatcaaaaattgcaattgaaacagtcactagaatcccaaaaaaaatttattgct
attagtaataatgccgcccagcatatggacaatctagcaagtggtggctctagtcccagt
cgggaagtacaggaaatcatgtctctacaagaacatgacagtggcgacgaagagttactt
gatgaaactgccaccacgaacaaggcgaaagtggataaccaatccgatggaaaagactta
gaagtatcgtcggccaagtgtcattcgacgaccaatattacaaattggccaaaagttccg
gaattgccgaaagctactaccaagcaatccactgaacttcagaacgcagcgcatttaatt
tcccaagcagtaaatgcctcatcaggaaataatcttaataatagccatgctgctccgaac
ctcattagcatcaacagcagcaataatgggaatctcgaaggagcggggagtaaaagtaat
acagacctcacggagttaaatggaaaaataaacgaattaattgaacttgcaaaaatgcag
tcgatgcaaattaacaaccttcaagcagaaatatccagcatgaagaaagctaatcccatg
tcatccacgaaaagtatgtccgagttctcatttaaactcgaaatgcagctatcaaagctg
atggagcaatatcttaaacgttatgaaaatgagcacaaaaaaaagttgactgcttttatg
gccggacgggagcagcaaaatagagagttacgtgacagtttcatacagataatgaatcaa
tatgtattaactcatcttggtgatgtagtatctaaagtgataaacatcgaaattcaacgt
caattagcgccaatgttatcagcgaagattgatcacttgcagcaacaaatacaaatagat
gtcgctcagaagctaacagcatttgatctcatgcttaaggataacatttcacaagtgtgc
aaaagcaagaacataattgacacttttggaaaatccgttttggtgggggttcaagggagt
ctgcaggcagcattcattgaatccatgtcaagtactttgatacctgcatacgaaaaaatt
tggtga
DBGET
integrated database retrieval system
