Rhagoletis zephyria (snowberry fruit fly): 108364311
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Entry
108364311 CDS
T08513
Name
(RefSeq) transcriptional repressor CTCF-like isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rze03000
]
108364311
03036 Chromosome and associated proteins [BR:
rze03036
]
108364311
Transcription factors [BR:
rze03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
108364311
Chromosome and associated proteins [BR:
rze03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
108364311
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-met
zf-C2H2_ZN142
zf-C2H2_jaz
Zf-C2H2_ZNF451_C
zf-C2H2_7th_ZNF462
Motif
Other DBs
NCBI-GeneID:
108364311
NCBI-ProteinID:
XP_017473428
LinkDB
All DBs
Position
Unknown
AA seq
675 aa
AA seq
DB search
MSESVDGDSEAQDLDALMHSIHKEITLCLSDELDTAKQESPKINPDEAVNSAEMENNLYY
LDEGGNIYLTLNSENTSDTACSQKRIVQPELEAEPKRKAKCTKDGQVNNDSVSKNYMVYL
KNSKVKAKSEEDVDDPNDEIYEFDELEEPTGSQEGQEMLLTKVIPVKATDSVQTITHKCP
HCIYRTHKRYMLSRHMRSHSDDRPYICSMCDRGFKTNITLQNHRNVHLGNKPHPCLSCES
RFTTAGDLARHVRYKHTFEKRHKCTECDYATVEMSKLRRHIRAHTGERPYQCPHCTYASP
DSFKLKRHLRTHTGEKPYECDICQSRFTQSNSLKAHKLIHSVDDKPVFQCALCPTTCSRK
SDLRIHVQKLHYSDTPIICKRCGKDLPDRYSYKMHVKTHEGERCYSCDQCHYKSISTRNL
EMHKQIHSDEKPFECDKCGQTFRQKQLLGRHINIYHNENYVPPPRLEKTHHCPYCTRVFA
HKGNMVRHMQLHDVAEEKGKNEIKVKVETEHGENILNFEDSYIDEEDETNSVENFEEYEI
IEEIEEAEGDITIETLEPTTSKSHNVRSAKIVKPKQEQVKENKYGIKIENEFEAIDEDDE
SGLPGYMVVKVMQSDDELEDDGDDCVILTNLENVKPTDNNENKGDAANCFGFKLEEGEDD
DEFEEAVFLNIVEEN
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaatcagttgatggagatagcgaagctcaggatttagatgctttaatgcattct
atacacaaggaaattacgctttgtctgtctgatgaactagatactgctaagcaggaatca
ccaaaaatcaatccagatgaagctgttaattctgccgaaatggaaaataacctatactac
ttggatgaaggtggaaatatatacctaacgttgaactcggaaaatacttcagatactgca
tgtagtcaaaaaagaattgttcaacctgaattagaagccgaaccaaagcgcaaggctaaa
tgcacgaaggatggacaggtaaacaatgattctgtttccaaaaactatatggtatattta
aaaaattcaaaggtaaaagctaaatcggaagaagacgtcgatgatccaaatgatgaaatc
tatgagttcgatgagctggaggaaccaactggatcgcaagaaggtcaggagatgttgtta
acgaaagtcatacctgttaaagcaacagattctgttcaaacgattacgcataagtgccca
cattgtatttatcgaacacataaacgatacatgttatcccgccatatgagatcccattcg
gacgaccgtccgtacatttgttcaatgtgcgatcgtggcttcaagacgaatatcacatta
caaaatcataggaatgtgcatctaggaaataagccgcatccgtgtttgtcgtgtgagagt
cgctttaccacagctggagacttggccaggcacgttcgatacaagcataccttcgaaaag
cgtcataagtgcactgagtgtgattatgctaccgtcgaaatgagtaagttacggcgccac
attcgtgcgcacactggtgaacgtccataccagtgccctcattgcacctacgcttcgccg
gacagttttaaactgaaacgacatttgcgcacacacaccggcgagaaaccctacgaatgt
gatatctgccaatcccggtttacacaatcgaactcacttaaggctcacaaacttatacac
agcgtggatgacaagcccgtcttccagtgtgcgctatgtccaacgacatgcagccgtaaa
tcggacctgcggattcacgtacaaaagctgcactattctgatacgccaattatatgtaaa
aggtgcggcaaggatttgcccgatcggtatagctacaagatgcatgttaaaactcatgaa
ggagaacgttgttacagttgtgaccagtgccactacaaatcgatttccacgcgaaatctg
gaaatgcataaacaaattcacagcgatgaaaagccatttgagtgtgataaatgtggacaa
accttccgacagaagcagctacttgggcgtcatataaatatttatcacaatgaaaattac
gtaccacctccaaggcttgagaagacacatcactgtccatattgtacgcgtgtatttgcc
cataagggtaatatggtacggcacatgcagttgcatgatgttgctgaggagaaaggcaag
aatgaaataaaagttaaagttgaaaccgagcacggggaaaatatattaaatttcgaagat
tcctatatcgacgaggaagatgaaacaaacagcgttgaaaactttgaagagtatgaaata
atcgaggaaatagaagaagcagaaggcgacataactatagaaacattggagcccactact
agcaaatcacacaacgtaaggagtgccaaaatagtgaaaccaaaacaggagcaagtaaaa
gaaaataagtatggtataaaaatagaaaatgaatttgaagcaatagatgaggatgacgag
agtggtttgcctggttatatggtcgtaaaagtaatgcaaagtgacgatgaattagaggat
gacggtgatgattgtgttattttaactaacttggaaaacgtaaaaccgacagataataat
gaaaacaagggggatgctgcaaattgtttcggcttcaagctcgaagaaggcgaagatgat
gatgaatttgaggaagctgtttttctgaacatagtcgaagaaaattaa
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integrated database retrieval system
