Rhagoletis zephyria (snowberry fruit fly): 108364474
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Entry
108364474 CDS
T08513
Name
(RefSeq) DNA repair and recombination protein RAD54-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
108364474
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rze03400
]
108364474
DNA repair and recombination proteins [BR:
rze03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
108364474
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
ResIII
DEAD
Rad54_N
Transcrip_reg
Motif
Other DBs
NCBI-GeneID:
108364474
NCBI-ProteinID:
XP_017473649
LinkDB
All DBs
Position
Unknown
AA seq
778 aa
AA seq
DB search
MRRSMAPSQNREFKLHPCCDFTPPLQNKRKRRCPEENLVNKTRSPRVVPISEYEQAIAKI
LSRPFKVPIADYVPDYNGGNRCLGMRRSNVRKALHDPHACNALVLHIPPNYTEHQRITLD
ANKIQVHVVVDPLLSNILRPHQREGVRFMYECVQGLRGVFNGCIMADEMGLGKTLQCVTL
VWTLLRQSPDCKPTISKVIVVSPSSLVKNWEKEFTKWLHGRLHCLAIEGGAKEDTIRALE
QFVVDSGQRCGAPVLLISYETFRIYANILCRNEMGMVICDEGHRLKNSDNLTYQALMGLK
TKRRILLSGTPIQNDLTEYFSLVNFVNPEMLGSATDFKRNFENAILRGQNADSTDKERER
AVEKTQELIGLVNQCIIRRTNQILTKYLPVKFEMVICAKLTQMQMDLYRNFIKSDKIRRS
LTDCNEKTSLTALANITTMKKLCSHPDLIYEKVLARENGFENSQDFFPANYNPKEFNPEL
SGKFMLLDFMLASIRTNSDDKVVLISNYTQTLELFEKLARKRRYTYVRLDGSMTIKKRSK
VVDKFNDPLSDCFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQAMARVWRDGQRK
PCYIYRLVATGSIEEKILQRQTHKKSLSSTIIDHNESDEKHFTRDDLKDLFRYEEDILSD
THIKLKCKRCVNNIQMQPPPEDSDCTSHLSQWYHCSNNKGLSDSTLSQAWLTSKCVSFVF
HHRSQIEVQPKEESTDKESMQVDCGKENMNKKHSKCKKDVDDDYSDYEPDDPADSDYE
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgcgacgaagtatggctcctagccaaaatcgggaatttaaattacatccatgttgcgat
tttacaccaccccttcaaaacaaacgaaaacgtaggtgtccggaggaaaatttggtaaat
aaaactcggagtccgcgcgtcgtgccaataagtgaatatgaacaagcaatcgccaagata
ctttcgcggccatttaaagtgcctatcgctgactatgtgccagattacaatggtggtaat
cgatgccttgggatgcggcgcagcaatgtacgaaaggcattgcacgatccacatgcgtgc
aatgctttggtattgcatattcctcccaattatacagaacatcaacgcattacattggat
gctaacaaaatacaagtacatgtagtagttgatccactactaagcaatattctgcgccca
catcagcgcgaaggggttcgtttcatgtacgaatgcgtccaagggcttcgtggtgtattc
aatggctgtattatggccgatgaaatgggtttagggaagactttacaatgtgtaacacta
gtatggacgctacttcgacagagtcctgactgcaagccgaccatttcaaaggttatcgta
gtgtcaccatcatcattggtcaaaaactgggaaaaagagttcactaaatggttgcatggg
cgcttacattgtcttgctattgaaggtggcgcaaaagaagacacaattcgtgcactggaa
cagtttgtggtggatagcggacaacgctgtggtgccccagtactattgatcagctatgaa
acctttcgcatttatgcaaatattctatgtcgtaatgaaatgggcatggttatctgtgat
gaaggtcaccgcttgaaaaatagtgataatctgacatatcaagctcttatggggttgaag
acaaagcgacgaattttactctctggcacaccaatacagaacgatctaactgaatacttt
agtttagtaaacttcgtaaatccggaaatgttgggctcagcgacggacttcaagcgaaat
tttgaaaatgctatactacgtggccaaaacgcagattctacagataaagaacgcgagcga
gcagtagagaaaacacaggagctaataggtcttgtgaatcaatgcatcatacgccgcacg
aatcagatattaacaaaatatttgcctgttaagtttgaaatggtaatatgtgcgaaactt
actcaaatgcaaatggatttgtatagaaacttcataaaatcagataaaatacgaagaagt
cttacagattgcaatgaaaagacctctctaactgctcttgccaacatcacgacgatgaaa
aaactgtgtagtcacccagatctaatttacgaaaaggttttggcacgcgagaatggtttc
gaaaactctcaagatttctttcctgcaaactataatccaaaggagtttaatccagaattg
agtggtaaatttatgctcctggacttcatgctagcgtctatacgcacaaacagtgacgat
aaggtagtccttatttcgaactatacacaaacactagagttattcgaaaaacttgcgcgt
aaaagaaggtacacctacgttcggcttgatggttccatgaccatcaagaaacgcagcaaa
gttgtggataagttcaacgatccgctatccgattgttttctctttatgttgagttccaag
gctggtggctgtggtttgaatttaattggcgcgaaccgtcttttcatgttcgatccagat
tggaatccggcaaatgatgagcaggcaatggctcgagtttggcgggatggacaaaggaaa
ccatgttacatatatcgtttggttgctacaggctcgattgaagaaaaaatactacaacga
caaactcacaaaaaatcactgtcaagcactataatcgatcataatgagagtgacgaaaag
catttcacacgtgacgatctgaaagacctattccgatatgaagaagatatcctttccgac
acgcatataaaattaaaatgcaaacgctgcgtaaataacatacaaatgcaaccacctcct
gaggatagtgattgtacatctcatttgtcgcaatggtatcattgctcgaacaataaagga
ctgtcggacagtacattatcgcaggcatggctaacaagtaaatgtgtttctttcgttttc
caccatcgatcgcaaattgaggtacagccaaaggaggaatctacagataaagaaagtatg
caggtcgattgtggtaaggaaaatatgaataaaaaacatagtaagtgcaaaaaggatgtg
gatgacgactactccgattatgaaccagatgatccagctgatagtgattatgagtag
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