Rhagoletis zephyria (snowberry fruit fly): 108364842
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Entry
108364842 CDS
T08513
Name
(RefSeq) ribonucleases P/MRP protein subunit POP1
KO
K01164
ribonuclease P/MRP protein subunit POP1 [EC:
3.1.26.5
]
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
108364842
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rze03009
]
108364842
03016 Transfer RNA biogenesis [BR:
rze03016
]
108364842
03029 Mitochondrial biogenesis [BR:
rze03029
]
108364842
Enzymes [BR:
rze01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
108364842
Ribosome biogenesis [BR:
rze03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
108364842
Transfer RNA biogenesis [BR:
rze03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
108364842
Mitochondrial biogenesis [BR:
rze03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
108364842
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
POP1_C
POP1_N
POPLD
Motif
Other DBs
NCBI-GeneID:
108364842
NCBI-ProteinID:
XP_017474179
LinkDB
All DBs
Position
Unknown
AA seq
856 aa
AA seq
DB search
MASNKLEYDSTLGGSVNLPTHLPTFRYAANVVQEMRQLIDEVRNPVSRKLVFQTLPKHMR
RRAMSHHPKRLPRKYRAAHRSQMAKAGKPQQSKRPSRKYRRRPGNLLRDYLRRQRRNVWL
ETHIWHAKRFHMVERWGYRLPQSSCDKTYRACYRASAEHCLLQDMSFYVCIELKGKFADL
RQGFTRLTSPKCGLSIAAKTYATGRREGSIDLFRDGKYPEYALGRVSFMWQPTGEAVNEE
EIPRTLWLWVHPSAYPAVLEELIKVFELISLSSITVPIEPDKPLTKDGNEMQVKSTKPRK
PNEQRRLQFMTKTLAFERIKRYGNTKLCIELNDLKDVMNRFRLTGHLAQSVLIHTFKPKC
FKEDAQPTWLHKWFKENTSSKVVHDKQSEFWQNCAELGSPGELLSNMILALNIEDPRLTR
PKKRTKALPSQLSSKSRLELLLNMSDHLAQSVLWNMDVRDGLCKSMITPSAYSKLRAKHA
VVPGARCQFEDEMQAVPVILIQRPGSQREQYKRLGYGCGWDVIMPAGYGMPIWLSLIMWG
AKPGGLREFETIAREMGTEEHLPDTVAGRVLAATRHQELSAKYFRKPPNKRHNYKKMAIV
SPFRAPFTELIRDWTTDPTQISELTTNTFHILRDRALLQQLLLHIQGKSKIFPIEIPNNC
LIQLYFRMKSRGNLEDFSLICVPTRGDFKRNLRQIRMGNHEPVFTEPLLPDLAERERKRL
RQTHKQLLKRLRAKRVRVKRKQQETSKTRVYISPANTATLVAEQLKRMCKLWLPEDHTTL
YSVRKQCQREVFGYATTAHFSYTESTVCAVGYVTPAGLKQLLALCCQTNVRQPMCLLRNP
KSRHYRFACFKLHLDV
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atggcttccaacaaactggaatatgattcgactttgggtggatctgtgaatttacccact
catcttcccacattccgctacgccgccaatgttgtgcaggagatgcgccaactgattgat
gaagtgcgcaatcctgtcagccgcaagttggtcttccaaaccctgccaaagcatatgcgt
cgtcgcgccatgtcccatcatccaaagcgattgccacgtaaatatcgcgctgcacatcgt
tctcaaatggctaaagcgggcaagcctcagcagtcaaagcgcccgtcgcgtaagtatcgc
cgacgacctggtaacttattgcgagattacctgagacggcagcggcgaaacgtttggcta
gaaacacacatttggcatgcaaaacgttttcacatggtcgaacgctggggctatcgttta
ccgcaatccagctgtgacaaaacttacagagcatgctatcgcgcttcggcggaacactgt
ttgctgcaggatatgtcgttctatgtatgtattgaattgaaaggaaaatttgcagatttg
cgccagggattcacaaggttaaccagccctaaatgcggacttagtatcgccgcaaaaaca
tatgccactggtcgaagagaaggcagtatagatttatttagagatggtaaatatcccgag
tatgctctgggacgtgtttctttcatgtggcagccaactggtgaggcggtgaatgaggaa
gaaataccacgtacgctttggctgtgggtgcatccaagcgcttatcctgctgtgctggag
gaattgataaaagtgtttgaacttatttccttgagtagtatcacagtgcctattgaacct
gataaaccgttgaccaaagatggcaatgagatgcaagtgaaatctacgaagccgcgaaaa
cctaatgaacaacgtcgcttacaattcatgacgaaaactttagcttttgagcgcataaag
cgatatggaaatacaaaattatgtatagaactaaacgatctgaaagatgtcatgaatcgc
ttccgtctcacgggtcacctcgcccaaagtgtactcatacacactttcaaaccaaaatgt
ttcaaagaagacgcacaacctacttggttgcacaagtggtttaaagaaaatacttcctca
aaagtagtgcatgacaaacaatctgaattttggcagaattgcgctgaattaggttcacct
ggagaattactttcaaacatgatactagcactaaacatcgaagatccacgtttaactcgc
ccgaaaaaacgtacaaaagcactaccatcccagctttcaagcaaaagccgtctggagctt
ctgctaaatatgtcagatcatttagcgcaaagtgttttatggaacatggatgtgcgggac
gggctttgcaagagcatgataacacccagtgcgtatagtaagctgcgggctaagcatgcg
gtagtaccgggggcacgttgtcaattcgaagatgaaatgcaggctgtgccagtaatattg
atacaacgtccaggttcacagcgcgagcagtataaacgtctgggttatggctgtggctgg
gatgtgatcatgccagctggctatggtatgcccatttggctgtccctcatcatgtggggt
gccaaacctggcggactaagggagttcgaaaccattgcacgtgagatgggtacagaggag
catttgccagacacagttgctggtcgtgtgctcgctgctactcgtcatcaagaactaagt
gccaaatatttccgtaaaccgcccaataagcgtcacaattataagaaaatggcgatagtg
agtccatttcgtgcgccattcactgaactcatacgcgactggacaactgatcctacacag
atatcagagttaacaacaaatacctttcatatactacgtgaccgcgcgttgctgcaacag
ctgttgctacacatacaggggaagagcaaaatatttccaattgagataccaaacaattgt
ctgatacagttgtacttccgaatgaaatcgcgtggcaatttggaagacttctcgttaatt
tgcgtacccacacgcggcgatttcaaacgcaatcttaggcagataaggatgggaaatcat
gaacctgtctttaccgaaccactattgccagatttggccgagcgtgaacgcaaacgcttg
cggcagactcacaaacagctattgaagcgtttacgcgcaaaacgtgtgcgcgtaaagcgc
aaacaacaggagacaagtaaaacccgggtgtatattagtcctgctaatacagccaccctt
gtcgctgagcaacttaaacgcatgtgcaagctttggttgccggaagatcacactacactg
tacagtgtgcgcaagcaatgccaacgtgaagtattcggctatgcgacgacagctcatttc
agttacactgagtcgacggtgtgtgcggtgggctatgtcacaccggcaggcttaaagcaa
ttgcttgcgttatgttgtcagacaaatgtacgtcaacctatgtgtctactacgcaatccc
aaaagtcgacattatcgatttgcgtgctttaaattgcatttggatgtgtaa
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