Rhagoletis zephyria (snowberry fruit fly): 108364849
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Entry
108364849 CDS
T08513
Name
(RefSeq) neural-cadherin-like isoform X1
KO
K27892
neural-cadherin
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rze04515
]
108364849
Cell adhesion molecules [BR:
rze04515
]
Cadherins
Cadherin related
108364849
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
RET_CLD1
Cadherin_pro
Cadherin_4
ResB
Motif
Other DBs
NCBI-GeneID:
108364849
NCBI-ProteinID:
XP_017474191
LinkDB
All DBs
Position
Unknown
AA seq
1448 aa
AA seq
DB search
MAARCLLVQRRGYPLHNSEVRDSVKFSSKNPRIFSNRSFSVASRLLLTSRSLSLAFMFTI
AICGSLTEIHGAQALMSTTSTSNDGVGTTKIVGISVANAARMLAGSGGSAGKEYSLVLPH
DTYPGFSIKKFKTVPVNESAKWDTKSSSPSPTAVGAYHMLAGDYSKYFTVLDDGVVMTTS
DISPLVNRPVNLVVVEETPNATNTHNLQLFVIHRSDMLRFPGSMLDASGEVRENRPAGTR
VRGIPLMQALGGDAALESNGGAAKKIRYTIIDGNDDQAFALQARKSDTNSEMSVYSILVD
CDGDTGVWLVINRPLDRETKAHYDLSVQASDIDELDKTVSKIQVTVMDENDNRPIFKSSE
YKFAIAGQKDTGLGGNSTTMWKRFSILGKVEATDADGDKIAYRLTAPSNIVIIVPQTGEI
MLADQPRTSELLIEVEAHDLRYPSLVSKQPAKVLLEFLAPEPVSFIMQHFEHDAVNEHSH
HREKRRVTRAVRPTKRIEFTEADGDTEGKSVFQLEKETDKETFKIRDDNPWVTVETNGAV
RVKKKWDYEELGPEKTIDFWVIITNTGQHADLKYTDNQRVIIHVKDVNDEPPYFINRPLP
MQAVVQLNAPPNTPVFTLQARDPDTDHNIHYFIVRDRTGGRFEVDERSGVVRTRGTDLFQ
LDMEYVLYVKAEDQNGKVDDRRFQSTPEERLSIVGGKRAPQFYMPSYEAEIPENQKKDSD
IISVKAKSFADREIRYTLKAQGQGAGTFNIGPSSGIVKLAKELDFEDLRQPHVYSLIVTA
TEDSGGFSTSVELTIRVTDVNDNAPKFELPDYQAHNVDEDIPLGTSILRVKAMDSDSGAN
AEIEYLVSDDHFAVDSNGIIVNNKQLDADNNNAYYEFIVTAKDKGEPSKSGTATVRVYTK
NKNDEEPKFSQQVYTPNVDENAGPNTLVTTVVASDKDGDNVRFGFVGGGTSSGQFVIEDI
TGVIRLHNKAISLDRDKYELNVTAMDDGSCCVNGDHTIHTSTAVVVVFITDVNDNKPVFK
DCGTYYPKVEEGAPNGSPVIKVVATDEDKGVNGQVKYSIVQQPNQKGTKFTVDEETGEVS
TNKVFDREGDDGKFVSVTVKATDQGEPSLEGVCSFTVEITDVNDNPPLFDRQKYVENVKQ
DASIGTNILRVSASDEDADNNGAIVYSLSAPFNPNDLEYFDIQAESGWIVLKKPLDRETY
KLEAMAQDKGYPPLSRTVEVQIDVVDRANNPPVWDNTVYGPIYVKENMPVGGKVVSIKAS
SGIEGNPTVFYRLMPGSTAQTNKFHTFYLQQRPDNGDTWADIKVNHPLDYESIKEYNLTI
RVENNGAQQLASEATVYIMLEDVNDEIPLFTEREQETVLEGEPIGTKVTQVNAIDKDGTF
PNNQVYYYIVDSPRNEGKEFFEINLQSGEIFTKTVFDREKKGAYALEVEARDGAPSARPN
SNGQPNSG
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcgttgcttactcgtgcaacggcgggggtatccgctacataacagtgaggtg
cgcgattctgttaagttttcttcaaaaaacccgcgtattttttcaaatcgttcgtttagt
gtcgcgtcgcgtctcctccttacgtcgcgttcgttgtcactcgcatttatgttcaccatc
gctatctgcggatcgctcaccgaaattcatggtgcgcaggcgcttatgagcaccacttcc
acgtctaatgacggagttggtacaactaaaatagtcggaatttcagtggctaatgctgcc
cgcatgttagctggtagtggcggatctgctggcaaagaatactcgcttgtgctaccacac
gatacctacccgggttttagtattaagaaattcaaaacggtgcccgtgaatgagtcagcc
aaatgggatacaaagtcctcatcgccatcaccaacggctgtaggtgcttaccatatgctt
gcgggagattactccaaatattttactgtgctcgacgacggcgtcgtgatgaccacatcc
gatatctcaccactagtaaatcgcccggtgaatcttgttgtggtcgaagagacacccaat
gccactaatacgcacaatttgcagttatttgtgattcaccgcagtgacatgttgcgcttt
cctggctcaatgcttgacgctagcggtgaggtgcgtgagaatcggcccgctggcacccgt
gtacgaggaatcccgctgatgcaagctttgggtggtgatgcggcgctggaaagtaatggt
ggcgctgcgaagaagattcgttacaccatcatcgatggcaatgatgatcaggctttcgct
ttacaggcacgtaaatctgatacgaatagtgagatgagcgtatactccattctagtagat
tgcgacggagatactggtgtgtggctagtcataaatcggccattggatcgtgaaacaaag
gcccactatgatctttcagtgcaagcctcagacattgatgaactcgataagaccgtctcg
aagatacaggtgactgtaatggatgaaaatgataaccgtcccatatttaaatcaagtgaa
tacaaattcgccattgccggccaaaaggatactgggctaggaggcaacagcacgactatg
tggaaacgcttctccatactaggtaaggtagaagccaccgatgctgatggcgacaagatt
gcctaccgactgactgcacccagcaatattgtcatcattgtgccgcaaaccggtgaaatt
atgttggccgatcaacctcgaacttctgagttgctgatcgaggtagaagctcatgattta
cgctatccttctttggtaagcaagcagccagccaaagtattgcttgagttcctagctccc
gagccggtttcctttataatgcaacactttgagcacgatgctgtcaatgagcactcacat
caccgcgaaaagcgtcgggtaacgcgcgcggtacgcccgacaaaacgtatcgagttcacc
gaggcagatggcgataccgaaggtaaatctgtcttccaactggaaaaggagaccgataag
gaaacctttaaaatacgtgacgacaatccttgggtgacagtcgaaacaaatggtgcggtg
cgtgtgaaaaagaagtgggactatgaagaattaggaccggagaagacaatcgatttttgg
gtcatcataacaaatactggacaacacgctgacctcaagtacactgacaatcaacgcgtt
atcatccatgtgaaggatgtcaacgatgaaccgccctatttcattaatcgcccattgcct
atgcaagcggtagtacaactaaatgctccacccaatacacccgtattcacattgcaggcg
cgggatcccgataccgatcataatatacattattttatagtacgagatcgtactggtggt
cgcttcgaggtggatgaacgttctggtgtagtacgtacacgtggcactgatctctttcaa
ttggatatggagtatgtcttatatgtcaaagctgaggatcaaaacggcaaagttgatgat
cgtcgcttccagagcacacccgaggaacggctatccattgtgggtggcaagcgcgctcct
cagttttatatgcccagctacgaggcggaaataccggagaatcagaaaaaagattcagac
atcatctcggtgaaggcgaaatcgtttgcagatcgtgagatacgctatacattgaaggca
caaggacaaggggctggtacattcaacattgggccgtcgtcgggtatcgtcaagttggcg
aaagaattggatttcgaagatttgcgacagccgcatgtctactcgttgatagttactgcc
accgaagactcgggtggcttctccacatccgttgagctcaccatccgtgtcactgacgtc
aacgacaatgcacctaaattcgagctgcctgattatcaagcgcacaatgttgacgaagac
attccactcggcacgagcatcctgcgcgtcaaagcaatggattctgattctggagcaaat
gctgaaattgaatatctcgtttctgacgatcactttgctgtcgactcaaatggcataata
gtcaataataaacaactcgacgccgataacaacaatgcctactacgaattcattgtgaca
gctaaagataaaggtgaaccgtctaaatccggtacagcgacagtacgcgtctacacaaaa
aataaaaatgacgaagagcccaagttttcacaacaggtctatacaccgaatgtggatgaa
aatgctggaccaaatacgctcgtcacaactgttgtggcttccgataaagatggcgataat
gtgcggttcggttttgttggaggaggcacctcctctggacagttcgttatagaggatata
acgggtgtgatacgattgcacaacaaagccatttcactagaccgtgacaagtatgagtta
aatgtgactgccatggatgatggctcgtgctgtgttaatggtgatcacaccatacacact
tcaactgcagtcgttgtagtcttcatcaccgatgtaaatgacaacaagccggtgtttaaa
gattgcgggacttattaccccaaagtggaagagggtgcacccaacgggagtccggtgata
aaagtggttgccactgatgaggataagggtgtcaatggtcaggtcaaatactcaatcgtt
caacagccaaatcagaaaggcaccaaattcaccgttgacgaagagaccggcgaggtgtcc
accaacaaagtgttcgatcgcgaaggtgacgatggtaaattcgtttcggtcaccgttaaa
gcgactgaccaaggtgaacctagcttggaaggcgtgtgttcttttacagtagaaattaca
gatgtcaacgacaatccaccactctttgatcgacaaaaatatgtcgaaaatgtgaagcaa
gacgccagcatcggcacaaacatactgcgcgtctccgcctccgatgaggatgccgacaat
aacggagccattgtgtacagcttgagcgcccccttcaatcccaacgatttggagtatttc
gatatacaggctgagtcgggttggatagtgttaaagaagccgcttgaccgcgaaacatat
aaattagaagcaatggcgcaggacaaaggctatccgccgctgtcgcgtaccgtcgaggtg
caaatcgatgtggtcgatcgcgccaataacccgcccgtatgggacaatacggtgtatggg
ccgatttatgttaaggaaaatatgccagttggcgggaaagtcgtctcgatcaaagccagt
tcgggtatcgaaggaaatccgactgttttttaccgactaatgcctgggtccaccgcacaa
accaacaagtttcatacgttttacttacaacaaagaccggataatggggatacatgggcc
gatataaaggtgaatcatccgttggattacgagagcataaaggaatacaatctgacgata
cgtgtagagaacaacggcgcccaacaattggcatctgaggctactgtttacattatgctc
gaagatgtaaacgatgagataccattgtttaccgaacgtgaacaggagactgtgctggaa
ggtgaacccattggcacgaaagtgacgcaagtgaatgccatcgacaaggatggcacattt
ccaaacaatcaggtctactactacatcgttgattcaccgcgcaatgaaggcaaagagttt
tttgaaattaatttgcaaagtggagagatctttaccaaaaccgtattcgacagagagaag
aaaggagcttatgcactagaagtggaagcgcgggatggcgcgccatcagcaaggccgaac
agtaatggacaaccaaattcaggttag
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