KEGG   Rhagoletis zephyria (snowberry fruit fly): 108364902
Entry
108364902         CDS       T08513                                 
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
rze  Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:rze00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    108364902
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rze03021]
    108364902
   03036 Chromosome and associated proteins [BR:rze03036]
    108364902
Transcription machinery [BR:rze03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     108364902
   Coactivators
    SAGA/TFTC/STAGA complex
     108364902
Chromosome and associated proteins [BR:rze03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     108364902
    STAGA complex
     108364902
    TFTC complex
     108364902
    SAGA complex
     108364902
    SLIK complex
     108364902
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 Beta-prop_IFT122_1st WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz EIF3I Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR90_POC16_2nd WD40_Gbeta Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_WDR36-Utp21_1st Beta-prop_EML WD40_MABP1-WDR62_2nd ANAPC4_WD40 WD40_MABP1-WDR62_1st TFIID_NTD2 Beta-prop_Aladin WDR90_beta-prop_4th Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_SCAP Beta-prop_RIG_2nd CFAP251_N Beta-prop_VPS8 DSE1_N ASA1 Beta-prop_Vps41 Beta-prop_WDR19_1st Beta-prop_NOL10_N Beta-prop_HPS5 Tricorn_2nd Beta-prop_Nup120_160 Beta-prop_WDR35_TULP_N Beta-prop_TEP1_C eIF2A Beta-prop_WDR41 RMC1_N Beta-prop_DCAF4 PD40 Cytochrom_D1 DUF8832
Other DBs
NCBI-GeneID: 108364902
NCBI-ProteinID: XP_017474270
LinkDB
Position
Unknown
AA seq 735 aa
MPDMAEKSSGNKGKKSKNDLFRTSLGYYLKQKSYVGNEKFRKSDFLLLQNKQQFMVQKML
DLDLQCGNSFAFSNVQCITNNHHIVDQQFGRFSQFVEAQSDLIRLELRRFYAPMLCHLYL
ELMKAREQKAASELLKKYAHLVSSVETYEAPLPTKINGCSVANDSHSDQSNAATPHTSIR
FVTPSSETPADPELIYFTKLIQTLSACTKLETAESDPDVSQFRSSKYEIHTTEAVVDALR
GYLEKRGHVLILNLIYSWIHVHVVDNEVHKWSEDNILMEFEAVEDDEESKMEFSDIKIKA
NIGSERFSKKRTTEDPPEELMVKSEKEEENTDEMKKLRSQQVEESLQTLQACSEQLLKGQ
TQYPLFIKLADRSRGLSSAHLDAGECHLIAGFNNSVVQLWQLNQQICRGKNLYTRFADSV
CRWEINNVCAGESETEDEIDLDVREHARTNNSDRQKRKFEAGKYEGNSFNEYGGIQLRGH
GAGVTDVRFSTHYPLIYSTSKDATIRSWRAESYGCACIYRGHRYPVWCIDESPVGMYVAT
GSKDLTARLWSLERDVPLITYAGHTQDVECIAFHPNGNYLATGSADLSVRLWCVTSGKLM
RVFSDCKQPVTNVAFSPDGKMLAAGGEESKIRIFDLAAGAQLNELKDHTSAINSISWSKG
GRYLASACRDGSLRVWDVKKLSPMNDSCSSSSTTNSSSSSSSTTLNRVMTLSSNCQNLVK
VSFSRQDEMVCVIGA
NT seq 2208 nt   +upstreamnt  +downstreamnt
atgccagacatggctgaaaaaagtagtggaaataaaggcaaaaagtctaaaaatgattta
tttcgaacatccttgggatactatctgaagcagaaaagttatgtgggaaacgagaaattt
cgcaagtctgacttcctgctactccaaaataagcaacaatttatggtacaaaaaatgctg
gatctggatctacaatgtggaaactcattcgctttctctaatgtacaatgcatcaccaac
aatcatcatattgttgatcaacaatttgggcgattttcacagtttgttgaagcacaaagc
gatttgatacggctagagttgcgacgtttttatgcgccaatgttgtgtcatctttatctt
gagttgatgaaagcgcgagaacaaaaagctgcttctgagttacttaagaaatatgcgcat
ttagtgtcatcggtggaaacttacgaagcgcctttgccgacgaagataaatggctgctcg
gtagccaatgactctcattcagatcaatccaacgctgctactccgcatacaagcatacgc
tttgtaacgccatctagtgaaacaccagcggaccccgaattaatctatttcacaaaactc
attcaaacactttccgcttgtacaaaattggaaacggctgaaagtgatccagatgtgtca
caatttcgttcctccaagtatgagatacacaccactgaagcggtagtggatgcattacgt
ggctatttggaaaaacgtggccatgtattaatactcaatctaatatattcatggattcat
gttcatgtcgtcgataatgaggtgcacaaatggagtgaagataatatccttatggagttt
gaggccgttgaagacgacgaagaaagcaaaatggagttttctgacattaaaataaaagcc
aacataggaagcgaacgctttagtaaaaaacgtaccacagaagaccctccagaagagctt
atggtaaagtcagagaaagaggaagaaaatacagatgaaatgaaaaaattacggtcacaa
caagtggaagagagcttgcaaactttacaggcctgcagcgagcaattgctaaaggggcaa
acacagtatcccctttttataaagctagccgaccgcagcagaggactttcttcagctcac
ttggatgctggtgaatgccatttgattgcaggatttaataattcggttgtgcagttatgg
caactaaatcagcaaatctgtaggggaaaaaatctttatacccggtttgcagactcagtg
tgtcgatgggaaataaacaatgtttgcgccggggaatctgagactgaggacgaaattgat
ttagatgttagagaacatgcgcgtaccaataatagcgaccgacagaaacggaagttcgaa
gccggcaaatacgaaggcaattctttcaacgaatatggtggcatacagttgcgtggtcat
ggcgctggcgtcacagatgtacgcttttctacacattaccccctcatttacagcacatct
aaagatgccacaatacgaagttggcgggcggaaagctatgggtgtgcgtgcatttatcga
ggccataggtatccagtttggtgtattgatgagagtccggtgggaatgtatgttgccacc
ggttcgaaggatctcactgcgcgtttgtggtctttagaacgcgatgtccccttaataaca
tacgctggtcatacacaggatgtagagtgtatcgcgtttcatcccaatggcaattatctt
gccactggttcagcagatctgtctgtgcgtttatggtgcgtcactagtggaaaactgatg
cgtgtcttctccgattgtaaacagcctgtaacaaacgttgcatttagccctgatggtaag
atgttggcagccggtggtgaagagtcgaaaatacgtattttcgatttggctgctggtgcg
caattaaatgaattgaaagaccacacttccgcaataaacagtatttcatggagcaagggt
ggcagatatttagcgtcggcatgccgtgatggctctcttcgcgtatgggatgtaaagaaa
ttatcgcccatgaatgacagttgcagcagtagcagtacaacgaattcgtcttcatcctcc
tcttcaaccactttaaatcgtgtaatgacactcagtagcaattgtcagaatctagttaaa
gtttcattcagccgccaagatgaaatggtctgcgttattggcgcctaa

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