Rhagoletis zephyria (snowberry fruit fly): 108364914
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Entry
108364914 CDS
T08513
Name
(RefSeq) transmembrane channel-like protein 1
KO
K21988
transmembrane channel-like protein
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rze02000
]
108364914
03037 Cilium and associated proteins [BR:
rze03037
]
108364914
Transporters [BR:
rze02000
]
Other transporters
Pores ion channels [TC:
1
]
108364914
Cilium and associated proteins [BR:
rze03037
]
Other cilia and associated proteins
Stereociliary proteins
108364914
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
108364914
NCBI-ProteinID:
XP_017474286
LinkDB
All DBs
Position
Unknown
AA seq
849 aa
AA seq
DB search
MSGYGMKNRIYVSDSSEDFDRIEVITTSTASSQSDLFTQLEGSQNLLTSIGNGQQLRIFA
ASASVANDDNKSKKSDCGGSRDGTDEQCGDESIELINNFGGHRHHLRPTSPLAVLSGSFS
RGATPTNMVRRWSQTLARFDRDKHSIREKTIYRMPSRKFFEVDGKLLSTNGLDAENEVEL
LAQEIEQHDGLMQDTALSHQHRLETLRALPQPLCVKRMLKQKLAITIEQHASEKQRCSWC
HFFTNAFIAFLFRSWKLVTFINHNLEIWYDELKTIEGHFGCNVSSFFNFLRWLLMLNVLV
LVCVFTFITFPQVLYNTIATEEMYLNETVLTGNYTGGDGEGESGLIMNVLTGEGYLQNSL
IFYSGYSNATFRLHPALNRYSLPHAYFMTMLVLYLLIFVVISTKMARVYRISFIQAAGSA
RGMLAPKTFCFWDFGISNRKAAELKHMAIFTEFKAVLNERTETKKNLTIWWRIWFICSRL
IAHVLVAAIIGCAGVAVWILLTRLDSTDTGWRTLSTAGILNLTMLLMQSVLSWISRMEDY
RSPRRTLHIALLRNFMLEAVIISVLVYFLLTKEYSQCWETHIGQELYRFVVMDTFICLFI
IPLICVTRAFLSSIYWPWLGGPEFDISQKSLGLVYNQTLLWLGLLFAPLLVAIIVCKMFL
KFYINKTLLLNLCKPSCNIWRSAQTQTLYLVFTFVSLLGVILTLGYIMTQLPMSAQCGPF
RESGYMFQIFIDGVLQLRHNQSLWRLLTLLIRPAAVGIMLVIMSALAYYLRAKSRARRLM
VKLLKEMIYLEAKDKEFLLNRIMNLTKKPDPSLCDGKSLRRVRKRAIQTAPTEIFVQNEI
SVLGRNATT
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggctacgggatgaaaaatcggatctatgtttccgacagcagcgaagatttcgat
cgcattgaggtgattactacgtcgacggcatcatcacaaagcgatttatttacgcaactc
gaaggtagccaaaatctgctcactagcattggaaacggtcaacaactcagaatcttcgcc
gccagtgcatcagttgccaacgatgacaataaaagtaagaaaagcgattgtggcggcagt
cgcgatggcacagatgaacagtgtggcgatgagtccatagagctgataaataatttcggt
ggacatcgacatcacctgcgaccaacttcaccgctggcggtgctatctggtagtttcagt
cgcggtgcaacaccaacaaatatggtgcgtcggtggtctcagactttggcacgcttcgac
cgagataaacatagtatacgagaaaaaactatatatcgcatgccttcacgtaaatttttc
gaagtggatggaaaattgctctctacaaatggcttggatgcggagaatgaagtcgaattg
ttagcacaggaaatcgaacagcacgatggcctcatgcaagacacagcactaagtcatcaa
catagactagaaacacttcgcgcgctgccgcagccactttgtgtgaaacgcatgcttaaa
caaaagttggccatcaccattgagcaacatgccagcgaaaagcaacgctgcagctggtgt
catttcttcaccaatgctttcatagcttttctatttaggagctggaagctcgtaacgttt
ataaatcataacttagaaatttggtatgatgaactgaagacaatcgagggtcactttggc
tgcaatgtcagctcctttttcaactttctgcgttggcttctaatgctgaatgtgttggta
ttggtatgcgttttcacgttcatcacatttccgcaagtactctataacacaatagcaact
gaggaaatgtatcttaatgaaacagtattaactggaaactatacgggtggtgatggggaa
ggtgaaagtgggcttatcatgaatgtacttactggtgagggatatctgcaaaactcgctc
atattttacagtgggtacagcaatgcaacatttcgtctacatcctgctctaaatcgttac
agtttaccacatgcgtattttatgacaatgttggtgctttacctgctaatttttgtcgtc
atttccactaaaatggcgcgtgtctaccgcataagttttattcaagccgctggcagtgct
agaggtatgctggcacctaaaaccttttgcttttgggattttggtatatcgaatagaaag
gcggctgaactaaaacacatggcaatttttaccgaatttaaagcggtacttaatgaaaga
actgaaaccaagaaaaatctaactatttggtggcgtatttggtttatttgctctcgtctt
atagcacatgtgctggtggctgctataataggctgtgctggagttgctgtgtggatattg
ttgacgcgactcgattcaactgacactggctggagaaccctctcaacggcgggtatacta
aatctaacaatgctgctaatgcaatccgttttatcatggatttcgagaatggaagattat
cgttcaccccgtcgtactctgcacatagccttgttgagaaatttcatgctggaggcggtt
attataagcgttttggtatactttcttctaacaaaagaatatagtcaatgctgggagact
catattggacaagaattgtatcgctttgttgtgatggacacattcatttgtttatttatt
ataccactcatttgtgttacgcgagctttcctgtccagcatttactggccttggctcggt
ggtcccgaatttgatatatctcaaaaaagtttgggtctcgtctataatcaaacattgctg
tggttggggttactattcgcaccattgcttgtggcgattattgtttgcaaaatgttccta
aaattctacataaataagacgcttttattgaatctatgtaaaccatcctgcaatatctgg
cgttcagcacaaacacaaacgctttacctggtcttcacttttgtctctctgttgggcgtc
attttgacactgggctacattatgacgcagctacccatgagcgcgcagtgcggtccgttt
cgcgaatccggttatatgtttcaaatattcatagacggtgtactacagttgcgccataat
caatcactatggcgccttcttacgttgctcatacgccctgctgctgtgggcataatgcta
gtcataatgagtgcgctggcttactatctacgcgccaagtcgcgtgcccgtcgtctgatg
gtaaagttactaaaagaaatgatatatctggaggcgaaagataaagaattcttacttaat
cgcattatgaatctaacgaaaaagccggatccttcgctatgtgatggaaaatcgcttcgg
agagtgcggaagcgtgcaattcaaacagctccaactgaaatttttgtacaaaacgaaatc
agcgtgcttggtcggaatgcgacaacttga
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