Rhagoletis zephyria (snowberry fruit fly): 108364979
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Entry
108364979 CDS
T08513
Name
(RefSeq) E3 ubiquitin-protein ligase HRD1 isoform X1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze04120
Ubiquitin mediated proteolysis
rze04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108364979
04120 Ubiquitin mediated proteolysis
108364979
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rze04121
]
108364979
Enzymes [BR:
rze01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108364979
Ubiquitin system [BR:
rze04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108364979
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-ANAPC11
zf-RING_5
zf-RING_Vps41
zf_RING_Vps8
Prok-RING_4
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
108364979
NCBI-ProteinID:
XP_017474350
LinkDB
All DBs
Position
Unknown
AA seq
680 aa
AA seq
DB search
MQLLLSSICLALTSVVIGNAYYQKKQFYPAVVYITKSNASMAVIYIQFFVIVFMFGKLLR
KIFLGTLRAAEFEHLLERFWYALTETCLAFTVFRDDFNPRFVALFTVLLFLKSFHWLAEE
RVDFMERSPVLGWLFHIRVASLLLVLGTLDYVLLMHAYNSTLVRGPTVQLVFGFEYAILL
TVVASTAIKYVLHAAEMRTDIPWENKAVFLLYTELVIGLIKVILYVLFVVIMSKIYALPM
FVFRPMFFTIRNFKKALSDVIMSRRAIRNMNTLYPDATPEELRLSDNICIICREDMVNHS
KKLPCGHIFHTTCLRSWFQRQQTCPTCRLNILRAPNANSTAMPRQEDAAGGGVAGQAAPA
AAAGVAAAAAINQAPGGDGARIDGLGLPNATTLPGLFENIAAGNTASNQIPGGLPPFSTT
APPLNFQGVPMAPPFVMPPPFPFIAPYAVPPPPMPPDLSTLSDEELKALEGNERQHVEER
IKLLRNIQLMLNAAGVLMNNYQIISARLPSVQPPPPTAATSAASNSENDTSNAPGSTASS
SLTNLSDGPSTSAAAVAALAATHSKTEPKISSANDASLTAVALDKTSQPPLQKHNDVTIE
DIGGEEHDYSVTQRTASASTAASSSAHTPSVDIRADDKGTAISTEQPENAELSELRKRRL
KFLEELKKSPASTPATSTND
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgcaactattactttcgtccatatgtctggcgttgacgagcgtcgtcatcggaaacgcc
tactatcagaaaaagcagttctatcctgcggttgtgtacatcactaaatccaatgcttca
atggctgtcatctacatacaatttttcgtgatagtttttatgtttgggaaattgctacgt
aagatttttctaggcacattacgagcagctgaatttgaacatctacttgagcgattttgg
tacgcacttacggaaacatgtcttgcttttactgtattccgcgatgacttcaatccgcgc
tttgtggccctattcacagtgttgctattcctaaagtctttccattggctggcggaagaa
cgggttgattttatggaacgctctccagttttgggttggctttttcatatacgcgtcgca
agtctactgttagtattgggcacattggattatgttctgcttatgcatgcttacaactca
acccttgttcgtggtccaacagtacaattagtcttcggtttcgaatatgctatattgcta
actgtggtcgcaagcactgcgatcaaatatgtgctacatgctgcagaaatgcgcaccgac
ataccatgggagaataaggcagtatttctcttatacaccgaactagtgattggtctaatc
aaagttattttgtatgtacttttcgttgtaataatgtccaagatatatgcgttgccgatg
tttgtattccggccaatgttctttacgataaggaacttcaaaaaagcactaagtgacgtt
attatgtcccgtcgcgctatacgtaacatgaatacactttatccagatgctacccctgag
gaactacgactttcagataatatatgcatcatttgcagagaagacatggttaatcactca
aaaaaattgccctgtgggcatattttccacaccacttgtttgcgctcatggtttcaacgt
caacaaacatgtcccacatgtcggctaaacatattacgcgcacccaacgctaactcaacg
gcgatgccaaggcaagaagatgcagcgggcggcggggttgcaggacaagcagctcctgct
gctgcggctggcgttgctgctgcagcagcgataaatcaagcgcctggtggtgatggtgct
cgaattgacggactaggattgcccaacgctaccactctccccggcttatttgagaatata
gcagctggtaacaccgcctctaatcagataccaggtggtttacccccgttctctacaacg
gcaccgccattaaactttcaaggagtgccaatggcaccgccatttgtgatgcctcctcca
ttcccatttattgccccatatgctgtaccaccacctcctatgccaccggatctaagcaca
ttgagcgacgaagaactaaaagctttggaaggaaatgaacgtcaacatgttgaagaacgt
atcaagctgctacgaaatattcaattaatgctaaatgctgcaggggttctgatgaacaac
taccaaatcattagtgcgcgattgccatctgtacagccaccaccaccaactgctgctaca
tcagcggcttcgaacagcgaaaacgatacaagcaatgctccgggcagcaccgccagctcc
agtcttactaatttaagcgacggtcctagtacgtccgctgcggcagttgctgctctagct
gcaacacattctaaaacggaaccgaagatatcaagcgccaacgatgcatcactcacagca
gtcgctcttgataaaacatcacaacctccgttgcaaaagcacaatgatgtaactattgag
gatataggcggtgaagagcatgactatagtgtcacgcaacgtaccgcctccgcttctacg
gctgcgtcttcttcagcgcatacgccaagtgttgacatcagagctgatgataagggcact
gctatctcaaccgagcaaccagagaatgctgaacttagtgaattaagaaagcgacgtttg
aaattccttgaggagcttaagaaatccccggcgtcaacaccagctacttcaacaaacgac
tag
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