Rhagoletis zephyria (snowberry fruit fly): 108365052
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Entry
108365052 CDS
T08513
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB11 isoform X1
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03020
RNA polymerase
rze03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
108365052
09124 Replication and repair
03420 Nucleotide excision repair
108365052
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rze03021
]
108365052
03400 DNA repair and recombination proteins [BR:
rze03400
]
108365052
Transcription machinery [BR:
rze03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
108365052
DNA repair and recombination proteins [BR:
rze03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
108365052
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
SHNi-TPR
Motif
Other DBs
NCBI-GeneID:
108365052
NCBI-ProteinID:
XP_017474477
LinkDB
All DBs
Position
Unknown
AA seq
117 aa
AA seq
DB search
MNAPPTFESFLLYEGEKKIIKELDTKVTNAAIFTVNKEDHTLGNMIRNQLLKDPNVLFAG
YKVPHPLEHKFVIRIQTTSDYSPHEAFMNAITDLLAELSLFEERFKEAIKEKKEGGD
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccccaccaacgttcgaatcatttttgttgtacgagggtgaaaaaaaaatcatc
aaggagttggatacaaaagtcaccaatgcagcgattttcacagtcaacaaagaggatcac
acgcttggaaatatgattagaaatcaacttttgaaggatcccaatgttttatttgctgga
tacaaagtgccacatccattagaacacaaatttgttatcagaattcaaactacctccgat
tactctccacatgaagcttttatgaatgctataactgatttattggccgaattgtcgttg
ttcgaagagcgcttcaaggaggcgataaaggagaaaaaagaagggggcgactaa
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