Rhagoletis zephyria (snowberry fruit fly): 108365238
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Entry
108365238 CDS
T08513
Name
(RefSeq) general transcription factor IIF subunit 2
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108365238
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rze03021
]
108365238
Transcription machinery [BR:
rze03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
108365238
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_beta
TFIIF_beta_N
DUF6143
TUG-UBL1
Motif
Other DBs
NCBI-GeneID:
108365238
NCBI-ProteinID:
XP_017474719
LinkDB
All DBs
Position
Unknown
AA seq
273 aa
AA seq
DB search
MFKDDRELDLSNAGRGVWLVKVPKYIAQKWSKAPSNMDVGKLRISKTPGQKAQVSLSLTQ
AVVNLDPEEKIPTEHILDVSVVTKQTLGVFSHVMPPESTNMSNGKEKEPHPISDAEKLYM
EGRIVQKLECRPIADNCYMQLKLESIRRASVPQRKVQPIDKIVQNFKPVKDHAHNIEYRE
RKKAEGKKARDDKNSVMDMLFNAFEKHQYYNIKDLVKITKQPIGYLKEILKEVCDYNMKN
PHKNMWELKKEYRHYKSEEKKDDGKVLTDSDSD
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaggatgatcgggaattggacttgtccaatgcgggaagaggtgtttggctggtt
aaagtaccgaaatatattgctcagaaatggtcaaaagctccttcaaatatggatgtggga
aaattgcgtataagtaaaacaccgggacaaaaggcgcaagtgtccttatcgcttacacaa
gctgtagttaacttggatcctgaagagaaaattcctactgaacatatattagatgtttct
gtggtgaccaaacagacattaggtgtgttttctcatgttatgccaccggagtcaactaac
atgagtaatggcaaggaaaaggaacctcatccgattagtgacgcggaaaagctgtatatg
gaaggtcgtattgttcaaaagttggagtgtcgacctattgccgacaattgctatatgcaa
ttaaaacttgaatcaattcgaagagcatcggtgccacaacgcaaagtacaacccatagac
aaaatagtacaaaactttaagcctgttaaagaccacgcacacaatattgaataccgggaa
cgaaagaaagctgaaggaaagaaagcccgtgatgacaaaaattctgtcatggacatgctc
tttaatgcattcgaaaaacatcagtactataatattaaagatttggtgaaaataaccaaa
cagcccataggttatctcaaagaaattctcaaagaggtgtgtgactacaacatgaagaat
ccccacaaaaacatgtgggagctaaaaaaagaatatcgtcattataagagtgaagaaaaa
aaagatgatggaaaagttctaacagacagcgattcggattaa
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