Rhagoletis zephyria (snowberry fruit fly): 108365418
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Entry
108365418 CDS
T08513
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit B
KO
K03253
translation initiation factor 3 subunit B
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rze03019
]
108365418
03012 Translation factors [BR:
rze03012
]
108365418
Messenger RNA biogenesis [BR:
rze03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
108365418
Translation factors [BR:
rze03012
]
Eukaryotic type
Initiation factors
eIF-3
108365418
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
eIF2A
Beta-prop_THOC3
RRM_1
WD40_WDHD1_1st
Beta-prop_Aladin
WD40_CDC20-Fz
Tricorn_2nd
Beta-prop_WDR19_1st
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_WDR5
Beta-prop_ELP1_1st
Beta-prop_WDR3_1st
Nup35_RRM_2
RRM_5
RRM_Nup35
SWIRM
Motif
Other DBs
NCBI-GeneID:
108365418
NCBI-ProteinID:
XP_017474921
LinkDB
All DBs
Position
Unknown
AA seq
689 aa
AA seq
DB search
MAKKKSEEYGADGNDGDYEEEPNFEDPEGYVDDIPDDELLANMLAQRPLETDGVESVVVV
DNIPKVEPSRLEKLKSVIHKLFSQCGEIVNVVFPVDDEGKTKGYAFMEYKNASMAEEAVK
TLNNHRLDKNHTFSVNLFTDFQKYENIPEKWDPPTPQPFKVQNDLYTFITDPDAYDQYSV
AAETAPNSVQVSFWQNTLPEPNELESRERFTDTFVKWSPLGTYVVTFHKPGVAIWGGSSF
QKIQKFPHPSTQFVEFSPCENYLVTYGPTPTGQKVIIWDIRTGVEKRSFVADGMSVLSMF
RWSHDDKFVARLGDNSIHIYETPSFYLLDLKSIKIPGIRGFSWSPTDNVIAYWVEEQNQI
PARVTLMEIPKKREIRNKNLFHVADCKLHWQKSGDYLCVKVDRYSKLKKDKKELDVKFLG
MFYNFEIFHMREKEIPVDSVEIRELILAFAWEPIGNKFSIIHGEQSNANVSFYEVNKGVK
PTLVKKLEKKSCTHLFWSPRGQFIVMANLSMGTFEFVDTNNDFIISASPDHFRASEVEWD
PTGRYVVTGVSAWKVKEDTGFNMYTFQGRIIRRTILKNFVQFLWRPRPPTLLTEAQQKDI
KKSLKKYYPIFEQKDRLRLTRASKELLEKRAQLREQFMEYRNKRIAEWKEQKSRRMQLRN
HVDTDSLDTEEVDEEVVEFLVKEEVTVLE
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaaagaaaagtgaagagtacggagccgatggcaatgatggggactatgaagag
gaaccaaatttcgaagatcccgaaggctatgtcgacgatattcccgacgatgagctattg
gccaatatgttggcgcagcgtcctctggagacggatggtgttgaaagtgttgttgttgta
gacaacattccgaaggtagagccatcccgattggagaaattgaagtcggttattcataaa
ttgttctcgcaatgcggcgaaatagtgaatgtagtgttccctgtggatgatgaaggcaag
actaagggttacgctttcatggaatacaagaacgccagcatggctgaagaggcggtcaag
accttaaataaccatcgccttgataaaaaccacaccttctccgttaatttattcaccgat
ttccagaagtacgaaaatattccggaaaaatgggatcctcctactcctcaacccttcaag
gtacagaatgatttgtacaccttcattactgatcccgatgcctacgatcaatacagcgta
gccgctgaaactgcgcccaactctgttcaggtttcgttttggcagaatacacttccagag
cccaatgaattagagtctcgggagcgttttactgatacgtttgtcaaatggtcgccactg
ggtacctatgtggtcacctttcataaacccggtgtagcaatttggggaggcagcagcttt
caaaaaattcagaagttcccacatccaagcacacaattcgtagagttttcaccttgtgag
aattatcttgtcacctatgggccaacgcctaccggtcaaaaggtcataatttgggatatt
cgtacgggtgttgagaaacgctcattcgtcgcagatggcatgtctgttttgtcaatgttc
cgctggtcgcacgacgataagtttgttgcacgtttgggcgacaactcaatacatatttac
gaaacaccctcattttacctgctcgatttgaaatcaatcaagattcctggtattcgcgga
ttttcatggtcacctacggacaatgtgattgcctattgggttgaagaacagaatcaaatt
cccgctcgtgtcactctgatggagattcccaaaaaacgtgaaatacgtaacaaaaacctc
ttccatgtggctgactgtaagctacactggcaaaaatctggtgactacctctgcgtaaaa
gttgatcgctactcgaaattgaagaaagacaagaaggaattagatgtaaaattcctgggc
atgttttacaatttcgaaatcttccatatgcgcgaaaaagagatccctgtggattcggtg
gagatacgcgaattaattcttgcatttgcttgggaaccaataggtaacaaattctccatt
atccatggagaacagagtaacgcaaatgttagcttctatgaggtcaacaaaggtgtaaaa
cctacacttgttaagaagttggaaaagaagtcatgtacgcatttgttctggtcaccacgg
ggtcaattcattgtaatggctaatctctcgatgggtacctttgaatttgtggacaccaat
aacgatttcattatctctgcatcgcccgatcatttccgcgcctctgaagtcgaatgggac
ccaaccggtagatacgttgtgactggagtatcagcgtggaaagtaaaggaagatactgga
ttcaatatgtataccttccagggacgtataatacgacgcaccatattgaagaatttcgta
caatttttatggcgccctcgtccacccacattgttaacggaagcacaacaaaaggatatc
aaaaagagcttgaagaaatactacccaatatttgaacaaaaggatcgcttgcgtcttaca
cgtgcttcgaaggaactacttgagaagcgtgcacaattgcgcgagcagtttatggagtac
cgcaacaagcgtattgcggaatggaaggagcagaagagccgccgtatgcagctcagaaat
cacgttgacactgacagtttggataccgaggaagttgatgaagaagtcgttgaattttta
gtcaaggaagaagtaactgtgctcgagtag
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