Rhagoletis zephyria (snowberry fruit fly): 108365578
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Entry
108365578 CDS
T08513
Name
(RefSeq) DNA topoisomerase 3-beta
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03440
Homologous recombination
rze03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
108365578
03460 Fanconi anemia pathway
108365578
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rze03032
]
108365578
03400 DNA repair and recombination proteins [BR:
rze03400
]
108365578
Enzymes [BR:
rze01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
108365578
DNA replication proteins [BR:
rze03032
]
Eukaryotic type
DNA Topoisomerases
108365578
DNA repair and recombination proteins [BR:
rze03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
108365578
FA (Fanconi anemia) pathway
108365578
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
Toprim
HepT-like
Motif
Other DBs
NCBI-GeneID:
108365578
NCBI-ProteinID:
XP_017475120
LinkDB
All DBs
Position
Unknown
AA seq
862 aa
AA seq
DB search
MKKVLMVAEKPSLAGSLASILSNGRSTTKKASSNSCSTHEWVGPFRDERSVLFRMTSVCG
HVMSLDFVGKYNSWDRVDPAELFGCPTEKKEANPKQHMRSFLANEAKGCDYLVLWLDCDK
EGENICYEVMDAVSRVIPNVYSRNVTYRAHFSAITEKDIKGAMETLGYPNENESKSVDAR
QELDLRIGCAFTRFQTKFFQGRYGDLDSSLISYGPCQTPTLGFCVKRHDDIQTFKPESFW
YLQLLAGQPEVTLEWSRVRVFKKEIAMMLMQRVKEQKEALVESVTTKEQFKGRPQALNTV
ELMRIASSGLGIGPFQAMQIAERLYTQGYISYPRTETNQYPENFDLHAVLRLLQPSSEFG
DEARSILGDFNSPRKGKDAGDHPPITPMKLASRGDFDKDTWRVYDFICRHFLGTVSRDLK
YRTTTAKLRVGMETFTFTANVLIDPGYTKVMTWQAFGRDEALPPFVEGEKVAINDVRMAE
SQTGPPDYLTEAELITLMEQHGIGTDASIPVHINNISQRNYVRIETGRKLIPTTLGIVLV
HGYQKIDPELVLPTMRSEVERMLNLISKGSADFHAVLRHAIEIFRLKFLYFVKNIASMDS
LFEVSFSPLAETGKAHSRCGKCRRYMKYIQTKPARLHCSQCDETYSLPNGGNVKVYREFK
CPLDDFELLAFTTGAKGRSYPFCPYCFNHPPFRDMPKNGGCNSCTHPTCPHSLNTLGISS
CVECEHGILVLDCTLAPSWKLGCNRCDVIINCFKGATKVTVEEQKCTECGAQLVNVVYKS
DKTKFKDSSEEKSGCVFCSADFAHLVEKHRAVASRPVNVRGGGRGGGRGGVKVGRGGAGG
GRGGRGARQPRDKMAQLAAYFV
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagtattgatggttgcggagaagccgtcgctggctggctcactcgcctcaatc
ctatccaatgggcgaagcacgacgaaaaaagcatccagtaattcctgctcaactcatgaa
tgggttggtccattccgcgatgaacgcagcgtattgtttcgcatgacgtcagtctgcggt
cacgtcatgtcgctcgattttgttggcaaatacaactcttgggatcgcgtggatccggca
gagctattcggctgtcccactgaaaagaaagaagccaatcccaagcagcatatgcgttca
tttctggcgaatgaagcgaaaggctgcgattatttagtactatggctcgattgtgataaa
gagggcgagaatatttgttacgaagttatggatgcggtatcgcgtgtaataccaaatgta
tacagccggaatgtaacatatcgcgctcacttttctgccattaccgagaaggatatcaaa
ggcgctatggaaacgcttggttatcccaacgaaaacgaatcaaaatctgtggatgcgcgg
caagagctggacttacgcattggttgtgcgtttacacgctttcaaacgaaatttttccaa
ggacgttatggcgatttggactcatcgctgatatcatatggaccttgtcaaacgcctacg
ctgggattttgtgtgaagcggcatgatgatatacaaacgtttaaacctgagagtttttgg
tatctgcaattactggctggtcagccagaagtcacgctggaatggtcgcgtgtacgagta
ttcaaaaaagagattgccatgatgctgatgcagcgcgtgaaggagcaaaaggaagcgctg
gttgagagtgtgactactaaagaacagttcaagggacgtccacaagcgttgaacacagta
gaattgatgcgtattgcaagttcaggattaggtataggaccctttcaagccatgcaaatc
gccgagcgattatacacgcagggctatatcagttatccgcgtacagaaaccaatcagtat
cccgaaaatttcgatttgcacgccgttttgcgtctgttgcaaccctcctccgaatttggc
gacgaggcacgcagcatattgggcgatttcaattcgccacgcaaaggtaaagacgctggc
gaccatccaccgatcacgcccatgaagctggccagtcgtggcgatttcgataaggacacc
tggcgtgtatacgacttcatttgccgtcattttcttggcaccgtgtcacgcgacttgaag
taccgcaccaccaccgctaaattgcgcgttggcatggagaccttcaccttcaccgcgaac
gtattaatcgacccgggttatactaaagtgatgacttggcaggcattcggacgcgatgag
gctttaccaccctttgtggagggtgaaaaagttgctattaacgatgtacgtatggctgaa
tctcagacaggcccaccggattacctcaccgaggctgagttgattacactcatggaacag
catggcattggtacagatgcctccataccagtgcacatcaacaacatttcgcagcgaaat
tatgtgcgcattgagacgggacgtaaactcatacccacaactctgggtatagtgctggtg
catggatatcaaaagatcgatcctgagctcgtcttgcccactatgcgctccgaagtggaa
cgtatgctgaatttgatttccaagggttcagcggatttccatgctgtgctgcgacatgcc
attgaaattttccgcttgaagtttttgtatttcgttaaaaatattgccagcatggacagc
ctgttcgaggtgtccttctcgccattggccgaaacgggcaaagcgcattcgcgttgcggc
aaatgtcgacgttacatgaaatacatacaaacaaaacctgcacgcctgcattgctcgcag
tgcgacgaaacctactcgctgccgaatggcggcaatgtcaaagtttatcgcgagttcaaa
tgtccgctagacgatttcgagttactggcttttacaacaggcgcaaaaggacgttcatac
ccattctgtccatactgctttaaccatccgccattcagggatatgcccaaaaatggtggc
tgcaattcctgcacgcatccaacctgcccgcattcgctcaatacgctgggtatttccagt
tgcgtggagtgtgaacatggcatacttgtactggattgcaccttagcgcctagttggaaa
ttaggctgcaatcgctgcgatgtcattatcaattgtttcaagggcgccaccaaagtgacg
gtggaagaacaaaagtgcacggaatgtggcgcacagctagtcaatgtggtctacaagtcg
gataaaacgaaattcaaagatagtagcgaagaaaaaagtggctgcgttttttgctcggcc
gactttgcgcatttggtggagaaacatcgtgcggtggcatcgcggccagtaaacgtgcgc
ggtggtggacgtggcggtgggcgtggtggtgtcaaagttggacgtggtggtgctggcggc
ggaagaggcggacgcggtgcaagacaaccaagggataaaatggcacagttagcagcatat
ttcgtttaa
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