Rhagoletis zephyria (snowberry fruit fly): 108365884
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Entry
108365884 CDS
T08513
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM9-like
KO
K10649
tripartite motif-containing protein 9/67
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rze04131
]
108365884
04121 Ubiquitin system [BR:
rze04121
]
108365884
Membrane trafficking [BR:
rze04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
108365884
Ubiquitin system [BR:
rze04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
108365884
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
fn3
Glyco_hydro2_C5
PAP1
Motif
Other DBs
NCBI-GeneID:
108365884
NCBI-ProteinID:
XP_017475567
LinkDB
All DBs
Position
Unknown
AA seq
540 aa
AA seq
DB search
ESCLEFERLVTAQCEALIQAIHDRREYLLEAIRMDKDTKIRILKDQQSNCTGKLQQTTGL
IQFCIEALKETDSAAFLQVGSMLINRVANTDMTWHQEVTNAAPRVSPIVDLTLDDAALVR
AIDNLNFMQMKAVKDGEERLPAGEMLLPVTTTLKTNETTATASSTKNENTPITTTMPTKF
MRTATTLPKSISSRFHNKPNFMNLTNNAINTSAKKTFTTNTNANKINITSTSTTSSTTST
STSSSSSPSLSPTLSLPSLTLLSTLYPTMITTKTPLAPTIVPEDCSAENNSVTVAWQAPA
HSFVDGYVLELDDGSGGEFREVYCGKETICTVDGLHFNSMYNARVKAFNNAGEGEYSELI
GLQTAEVAWFTFDPILSGGAGSGLVFSNNNATVSVEGWEHRVALGSVGFSRGIHYWEFTV
DKYTMDTDPAFGVARIDVNRNKMLGKDEKSFAMYIDGQRSWFQHNSVHERRVEGGITTGS
TIGVLLDLERHTLSFLVNEMPQGSVAFRDLYGVFYPAVSINRGVTLTLHTALDAPKMDYF
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
gagtcctgcttggaattcgagagactggtgacggcacaatgcgaagccttaatacaagca
atacacgaccgccgtgaatatctactcgaggccatacgcatggataaggatacgaaaatc
agaatattaaaggatcagcaatcaaattgcacgggcaagttgcaacaaaccactggacta
atacaattctgtattgaagcgctaaaagagacagacagtgctgcttttttacaagtcggc
tctatgttgattaatcgtgttgccaatacggacatgacctggcatcaggaggtgacaaat
gccgctccacgtgtttcgccaattgtcgacttgacgctcgacgatgctgcgctggtgcgg
gccatagataatttgaattttatgcagatgaaagccgtcaaagatggagaagagagatta
ccagcaggtgagatgttattacccgtaaccacaacgttaaaaacaaatgaaacaacagca
actgcatctagcacaaaaaatgaaaacactccaataacaacaaccatgccaacaaaattc
atgcgtaccgcaacaacactaccaaaatccatttcgtccagatttcataacaaacccaac
ttcatgaacctaaccaataatgccatcaacacatccgccaaaaaaaccttcaccaccaac
accaatgccaacaagattaacattacctccacctccacaacatcatcaacaacatcgaca
tcgacatcttcatcttcatcaccgtcactgtcaccaacgttatcactaccatcactaaca
ttattgtcgacactctatccaacgatgataacaacgaaaacacctttagcaccaacaatt
gttccagaggattgctcagcggaaaataattcagttacagtggcgtggcaagcaccggct
cattccttcgtcgatggttatgtattggagttggacgatggcagtggtggcgagtttagg
gaggtctattgcggcaaggaaacaatttgcaccgtcgacggtctccacttcaattcaatg
tacaacgcgcgcgtaaaggccttcaacaatgccggcgagggtgaatactcggagctcatt
ggattacaaacagcggaagttgcctggttcacattcgatccgattctgagcggcggcgcc
ggctctggcctcgtcttcagcaacaacaatgccacagtgtcggtggagggttgggagcac
cgcgtcgctttgggttcggtgggcttctcgcgcggcatccactattgggaattcaccgtc
gacaagtacaccatggacacggacccggcattcggtgtggcgcgcatcgatgtcaatcgc
aacaaaatgttaggcaaagatgaaaaatcctttgccatgtacattgacggccaacgttcg
tggttccaacataattccgtgcatgagcgacgcgttgaaggtggcatcaccaccggcagc
accatcggtgtgctactcgatctggagcgacacactttaagcttcctggttaatgaaatg
ccacagggctccgttgcattccgagatttgtacggcgttttctacccggccgtaagcatt
aatcgtggcgttacactcaccttacacaccgctttggacgcgcccaaaatggattacttc
tga
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