Rhagoletis zephyria (snowberry fruit fly): 108365891
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Entry
108365891 CDS
T08513
Name
(RefSeq) pseudouridylate synthase 7 homolog isoform X1
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rze03016
]
108365891
Enzymes [BR:
rze01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
108365891
Transfer RNA biogenesis [BR:
rze03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
108365891
Prokaryotic type
108365891
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-GeneID:
108365891
NCBI-ProteinID:
XP_017475581
LinkDB
All DBs
Position
Unknown
AA seq
717 aa
AA seq
DB search
MGKNRTPFKRQRWRPQQRGTPSSNSNKNIDYGNRRIEAGGAGWQSLREDQAGITEYVNKI
AGFTGVVKSRFSDFQVNEIDANGKVLQITDLTTPQALVETLDETELAAARERFKEVITTE
VWEKIGVLAAMKSNNPAAQPIDINVSSLDKEKRTQVHNILKQLYGQKLVSSTISPTDSTD
ERFVRIMKPKGKPSEKRKRWTFPGEYVHFLVYKENMETTEAASRLASRLSMHPSHVNYCG
TKDKRAKTTQKFCIKRREPSQILTAAKVSKIKVGNFEFSNEVVKLGDLKGNRFRIALRHV
NGDEKEIEKALEGLRENGFINYFGLQRFGNHPDIPTYEIGVALLKSDYKTVVELILKPRE
HDLPFMDNIRRRWWEERNSAAAAANLNSNDSIEKKLLVGLATYGENDYSAALRKIPRNML
LLYTHAFQSLVFNRIASRRIREFGLKLIPGDLVYRNKEEMDDDIVEETILEDMVENEEVN
EAKEENVPIPNSDEKNEAAADEAAGSKFKRKVKALSAGEIESGGYTIFDIVLPLPGYDIT
YPDNEVKTWYEEILEEYGLSSQTLRHSVKTYALAGAYRKLLIHPSGLTWKFRKYSSAEES
LIVSDWDVVTGRYEPIQEDCEVGDFKALLLDFCLPRSAYATMFLRELLKSDTSAAHQMKI
ELDEKNKNKNSEQSRVNEDGGEEEILCDASEQDSSQKRKCESEKSDEVEEKKSKSDG
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaaatcgaacgccttttaaaagacaacgatggcgtccacaacagcgtggcact
ccatcatcaaactcgaataaaaatattgactatggcaataggaggatcgaagccggtggt
gccggatggcaaagtttgcgtgaggatcaagcgggaataactgagtatgtgaacaaaata
gcaggattcaccggggttgtgaaatcgcgattctcagattttcaagtaaatgaaatcgat
gcaaacggaaaggttttgcaaattaccgacttaacgacaccccaagcgctggtggaaacc
cttgatgaaactgaattagctgctgcgcgtgagaggttcaaagaagttataacaacagag
gtgtgggaaaagattggcgtattagcagcaatgaaatcgaacaatccagcagctcagccc
atagatatcaatgtatcgtctttggataaagaaaaacgaacgcaggtacataacatatta
aagcagttatatggacaaaaactagtgagttcaacaattagccccacggattccacagac
gagcgttttgttagaataatgaagcccaaaggaaaaccaagtgagaagcgcaaacggtgg
acctttccgggcgaatatgtacactttttggtatacaaggaaaatatggaaacaaccgag
gcggcttcaagattagcatcacgtttgagtatgcatccgtctcatgttaattattgtggc
accaaagataagcgcgccaagacaacgcagaagttttgcataaaacgtcgcgagccttcg
caaattttgaccgctgctaaagtgtccaaaattaaagtcggcaattttgagttcagtaac
gaagtggtcaagttgggtgacttaaagggaaatcgatttagaatagccctgcgccatgtc
aatggagatgaaaaggaaattgagaaggctctggaaggcctgcgggaaaacggatttatt
aattatttcggtttgcagagatttggtaatcatcctgatatacccacatatgaaattgga
gtggcacttttaaaatcggattataaaacggtcgttgaactgattttaaaacctcgagaa
catgaccttcctttcatggataatataagacggaggtggtgggaagaacgtaactcagcc
gcagcagccgctaatttaaattctaatgattctatcgaaaaaaagttactagttggacta
gcgacatatggcgaaaatgattactcggcggcattaagaaagatacctcgcaacatgtta
cttctttatacgcatgcatttcaaagtctggtattcaatcgcattgcatcgcgccgcatt
cgagaatttggtttgaagttaataccaggtgatttggtatatcgaaataaagaagaaatg
gatgacgatattgttgaagaaactatattagaggatatggtcgaaaatgaagaggtgaat
gaggccaaggaagagaatgtccccataccaaatagtgacgagaaaaatgaagcggctgca
gatgaagcagcgggttccaagtttaagagaaaagttaaggcattaagcgcaggtgaaatt
gagagtgggggttacacaatttttgatattgttttacctttgcctggatatgatatcact
tacccggacaatgaagtgaaaacctggtatgaagaaattctagaagagtacgggctctca
tcccagacattgcgtcacagtgtgaaaacatatgccttggctggcgcttaccgaaaactg
ttgatccatcccagtggtttaacatggaaatttcgaaagtactcgtctgcagaggaatca
ctcatagtatccgattgggacgttgttactggtagatatgaacccattcaagaggattgt
gaagtaggcgactttaaggctctgctgttagatttctgtttgcctcgatctgcatacgct
acaatgtttctgagagagctactaaaatcggacacctctgctgcacatcaaatgaaaata
gaactagacgaaaaaaataaaaataagaacagcgagcaatcaagggtaaatgaagatggt
ggcgaagaagaaatattatgtgacgcgagtgagcaggattcctcacaaaagcgaaagtgt
gagtccgaaaaatctgatgaggtcgaggaaaaaaaatccaagtctgatggatga
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