Rhagoletis zephyria (snowberry fruit fly): 108365912
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Entry
108365912 CDS
T08513
Name
(RefSeq) putative DNA helicase Ino80
KO
K11665
chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108365912
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rze03036
]
108365912
Chromosome and associated proteins [BR:
rze03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
108365912
INO80 complex (yeast)
108365912
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
DBINO
Helicase_C
ResIII
HDA2-3
AgI_II_C2
ATP_sub_h
Motif
Other DBs
NCBI-GeneID:
108365912
NCBI-ProteinID:
XP_017475619
LinkDB
All DBs
Position
Unknown
AA seq
1416 aa
AA seq
DB search
MLQLQEAKITQEQENLAGGRLRGLELKRPATSTGTPQIKTLSFDVTIFFQVFKINIEKTA
TPNKWITEYKSAARFVALKEPAAVILETDPEYEMPCKDVAKTIICKVDKMLPASGTVNGS
AIAMAQMTTQTAAAQPSFAGNSASITTPQSERPRIAEPLRIQRLEAALNMRPFMEYARHV
LSQPLSSGDDSNASEEEAKVGGVTDNSDDEGGGARKKRTRLLGTKEERQSVKMHLFNFND
LTNDREWLYEVLLSDTDTETEISDEDDYIKELLRTHMLEQKHRENFYKKTTNTQYAYYGA
GMLSNHDMFPEHQQSIVGVRKRRRRTKKENPAKPPKLTKEPKVRKPRKPKVEQPEPGEIP
PSELNNYAFGDTSAVNDDDEEEITDEMDSTLDANLSLLPPGGLAHSGRGRRRKSQQQRTP
EVMAARRRRVWQLMAKKELGRCQRAKANNHKEMVQNCKRVATMCSKVVRQRAMISQKVMK
ETVWRAKRLTREMMGYWKRYERVERDTRRRMEREAEEQRKMDVEIIEAKRQQRKLNFLIT
QTELYAHFMSKKLGQGTEEEQLRILNQLDEEINPRLAAYDDYDAEHFKSLAQKNAELAFS
ADRDKTQRFNVARIKEEKQEKQDAQLEDIKTETDNEEVPSFVKPAKADVPQPEMFKGTLK
TYQLKGVTWLANLYDQGISGILADEMGLGKTVQSIAFLCHIAERYGVWGPFLIISPASTL
HNWQQEMQRFVPDFNVVPYWGSPNERKILRQFWEQKDLHTRDASFHVVITSYQLIVSDYK
YFNRIKWQYMVLDEAQAIKSASSMRWKLLLGFNCRNRLLLSGTPIQNSMAELWALLHFIM
PTLFDSHDEFNEWFSKDIESHAENKTGIDEKQISRLHMILKPFMLRRIKKDVENELSDKI
EIMVYCPLTIRQKLLYMALKKKIRIEDLLHFTGGGAGSSGDGHHFDKNFTSNLMNLVMQF
RKVCNHPELFERRDAKSPFAMRCEEYVLPRLVYNDCLLHRAIPSKRHLLYNRFSIFKAAS
MLKSLFSEPSVTKASKSNEYYARYVDLNVSDDCCFSFTRLCDLSPGDMEDVTINGLVSYI
LHYRRRIVQYALLAYRRQWWSHYNATRFQLLEVMLENPLQRSFMFEQSVLRNFVFTGVTS
QESTVYAFGNYKTVNIQETIEHRVIRSKHVDLTKKSAIEQASYNDSMTIKTELDLDTSED
ATQMSTTPVSSKSQKSAPKHGEDVDSNGKLLPEFQHIPRTPTLYQCESLQMPRFLYGLSQ
RVQAVKRHMYCESRDAAWTQIRHLQCENPAGMELVNTALDLCRPRYGWSSIAVPDKQTLV
SDAGKLAVLDSLLTRLKAQGHRVLIYSQMTKMIDLLEEYMWHRKHRYMRLDGSSKISARR
DMVADFQTREDIFVFLLSTRAGGLGINLTAADTIGK
NT seq
4251 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaattgcaagaagcaaagattacacaagagcaggaaaatttggctggaggtcgt
cttcgcggtttggagttgaaacgtccagccacttcgacgggcactcctcagattaaaact
ttatcctttgatgtcacaatttttttccaagtctttaagatcaatatcgaaaaaaccgct
acaccaaacaagtggatcacggagtataaatctgctgcgcgattcgttgctttgaaagaa
cccgcagctgtgattctcgaaacagaccccgagtatgagatgccgtgcaaagatgttgcg
aaaacaatcatatgtaaagtggataaaatgctacctgccagtggtaccgtgaacggctcg
gcaatagctatggcacagatgacaactcaaacggccgcagcccagccctcttttgcgggg
aatagcgcaagcatcactaccccgcaatctgaacgtcctcgtattgcagaaccactgcgt
atacagcgattggaggcagcactcaacatgcgaccgttcatggagtatgctcgtcatgta
ttgtcgcagccgttgagcagtggcgatgactcaaacgcttctgaagaagaggcaaaggtt
ggtggtgttacggataattcagacgatgaaggaggcggtgcccgcaagaaacgtacacgc
ctacttggtactaaagaagagcgtcaaagcgtgaaaatgcatttattcaactttaatgat
ctaaccaacgatcgcgagtggctgtatgaagttttactcagtgacactgacactgagacg
gaaatcagcgacgaggacgactatattaaggagttgttaagaacacacatgctcgagcaa
aagcatagagaaaacttctataaaaaaacaacgaatacccaatatgcctactatggtgct
ggtatgctttccaatcacgatatgtttcccgaacaccagcaatctatagtgggcgtgcgt
aaacgtcgacgccgcactaagaaggagaatcctgcaaaaccaccaaagttgacgaaggag
ccaaaggttcgtaaaccacgaaagcctaaggtggagcaacctgaacctggtgagatacca
ccttctgagttgaacaattacgcttttggggacacgtcagctgttaacgatgacgacgag
gaggagattaccgatgagatggatagtaccttagatgctaatctgtcactgctgccacct
ggtggtttggcgcatagcggtcgcggacgtcgacgcaagagccaacagcaacgtacaccc
gaagtaatggctgctcgtcgccgtcgtgtttggcaacttatggctaagaaggagcttgga
cgctgccaacgcgccaaggcaaataaccataaagagatggtgcagaattgtaagcgcgtg
gcaactatgtgttcgaaggttgtgcgacaacgagctatgatatcgcagaaggttatgaag
gaaacggtgtggcgcgccaagcgtttaacgcgcgaaatgatgggatactggaagcggtat
gagcgcgtagagcgcgatacgcgccgacgtatggaacgtgaagcggaagagcagcgcaaa
atggatgttgagatcattgaagcaaaacggcagcaacgtaaactaaattttcttattacg
caaacggagttatatgcgcatttcatgtccaagaagctgggacagggcaccgaagaagag
caattgcgtatattgaatcaattggatgaagagataaatccaaggctagctgcctatgac
gattatgacgctgagcattttaaatcgttggctcaaaagaatgcagaactcgcattttca
gcagatcgcgacaagacccaaagatttaacgtggcgcggatcaaggaagaaaagcaagag
aagcaagacgctcaattggaggatattaaaacggaaacggataatgaagaagtgccatcg
tttgtgaagccagcaaaggcagatgtaccgcagccggaaatgttcaagggtacactaaaa
acgtaccaattaaagggtgttacttggctggctaatctatacgaccagggaataagcggt
atattagccgacgaaatgggtctaggcaaaactgtacagtcgattgcgtttctttgccac
attgccgaacgttatggtgtgtggggaccatttctgattatttcacctgcttctacgtta
cataactggcagcaggagatgcagcgatttgtgcccgatttcaatgtggtaccctattgg
ggttcaccgaatgagcgtaaaattctccgtcaattttgggaacaaaaagatttacatacc
cgtgatgccagctttcatgtggtaattacctcctatcagctgatcgtgtccgattacaag
tacttcaatcgtatcaagtggcagtatatggtgctggacgaggcacaggccattaagagc
gcatcttcgatgcgttggaaactattactgggcttcaattgtcggaaccgccttttactt
agtggcacgccaatacaaaatagcatggcagaattgtgggcgctgttgcatttcataatg
ccgacactcttcgactcgcatgatgaattcaatgaatggttctcgaaggatatcgaatcg
catgccgagaataagactggtatcgatgagaaacaaatatcacgactacatatgatactc
aagccattcatgttgagacgtatcaaaaaggatgtggaaaatgagctgtcggacaaaatt
gagattatggtatattgtccgctgactatacgacaaaaattgctttacatggcgttgaaa
aagaagatacgaattgaagatttattgcatttcacgggtggcggggcgggaagttccggt
gatggtcatcactttgataagaattttacatcaaatctcatgaatttggtgatgcagttt
cgtaaagtatgcaatcatccagaattgtttgaacgacgtgacgctaaaagcccttttgcc
atgcgctgtgaggaatatgtgttgccacgtctggtatataatgattgtttgcttcatcgc
gccataccaagcaaacgccatctgctttacaatagattctcaatttttaaggcagcttct
atgctgaaatcacttttcagtgaacctagcgtcaccaaagcatcaaagtccaacgaatac
tatgcacgttatgtagacttgaatgtcagtgatgattgctgtttcagtttcacccgactg
tgtgacctgtcaccgggagatatggaagatgttactattaacggcttggtgtcttacatt
ttacactaccgtcgcagaatagtgcaatacgctctattagcataccgccgccaatggtgg
tcgcattataacgctacacgctttcaactgctagaggtgatgcttgagaatccattgcag
cgcagctttatgtttgagcaaagtgtgttacgtaatttcgtatttactggtgtgacgtct
caggagagcactgtttacgcctttggtaactacaaaacagtcaacattcaggaaactatt
gaacaccgcgtcatacgcagcaaacatgttgacttaacgaaaaaatcggcgatcgaacaa
gccagttacaatgactcgatgactataaaaactgaattagacttggacacgagtgaagat
gcaacacaaatgagtacaacacctgtgtcaagcaagtcacaaaaatctgcaccgaaacat
ggtgaggatgtagactccaatgggaagcttctgcctgaatttcaacatataccacgcaca
cccactctgtaccaatgtgaatcgctacaaatgccgcgcttcctctatggtctcagtcaa
cgtgtacaagccgttaaaagacatatgtactgtgaaagccgtgacgctgcttggacgcag
atacgccacttacagtgtgaaaatcctgctggcatggaactggttaatactgccctcgat
ttgtgtcgaccacgttacggttggtcttcaattgcggtgcccgacaagcaaacactcgtt
tcggatgccggcaagctagctgtgctggatagtttgctaacacgcctcaaagcgcaagga
catcgtgtgctaatctattcccaaatgacgaaaatgatcgatttgctggaggagtatatg
tggcatcgcaagcatcgttatatgcgtttggatggttcgagtaaaatttcagcacgtcgt
gatatggttgccgattttcaaacgcgtgaagatatcttcgtttttcttctctcaacgcgt
gctggaggtttaggtatcaacttaacggctgcagatacgataggcaaataa
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