KEGG   Rhagoletis zephyria (snowberry fruit fly): 108366026
Entry
108366026         CDS       T08513                                 
Name
(RefSeq) cleavage stimulation factor subunit 1
  KO
K14406  cleavage stimulation factor subunit 1
Organism
rze  Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:rze00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    108366026
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rze03019]
    108366026
Messenger RNA biogenesis [BR:rze03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     108366026
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 WD40 WD40_Prp19 Beta-prop_WDR3_1st WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz CSTF1_dimer WDR55 Beta-prop_WDR3_2nd ANAPC4_WD40 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_2nd EIF3I Beta-prop_VPS8 Beta-prop_WDR75_1st NBCH_WD40 WD40_RFWD3 Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st Ge1_WD40 Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_Vps41 Beta-prop_SCAP Beta-prop_WDR19_1st Beta-prop_NUP159_NUP214 Beta-prop_HPS5 WDR90_beta-prop_4th Beta-prop_Aladin Beta-prop_TEP1_C Beta-prop_WDR35_TULP_N eIF2A Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_EDC4L Beta-prop_LRRK2
Other DBs
NCBI-GeneID: 108366026
NCBI-ProteinID: XP_017475773
LinkDB
Position
Unknown
AA seq 339 aa
MRDIEILDPRNLVKNREILYRLIISQLMYDGLEKFAMELSMLVKADECAPSERLLHVMIA
GMQATTEKPIAPKDDVLPGIDLEFEPEASALAPEPASYETAYVTSHKQSCRAGAFSHDGT
LVATGSVDASIKILDVDRMLAKSAPEDIEPGREQQGHPVIRTLYDHTDEVAFLEFHPREH
ILASGSRDGTVKLFDIAKPSVKKAHKVFTDCEPVNCLSFHPTGDYIAIGTEHFVLRVYDV
HTSQCFVSAIPSQQHKAAVTCVKFAPTAKLYATGSLDGAIKIWDGVSGRCINTIPEAHAG
AEICSLEFTRNGKVIKSLYRKIPCNQNTASNYFANYLLR
NT seq 1020 nt   +upstreamnt  +downstreamnt
atgcgcgatattgaaattttggatcccagaaatcttgtgaagaatcgtgaaatcctatat
agacttattataagtcaattgatgtacgatggcctggaaaaatttgcaatggaactctct
atgctcgtgaaagcagatgaatgtgctcccagcgaacgcctgttacatgttatgatcgct
ggcatgcaggctacaactgaaaaacctatagctcctaaggacgacgtgctgcctggcatt
gatttggagttcgaacctgaagcgtctgcgctagcacctgagccagcttcttatgaaact
gcttatgttacatcgcacaagcaatcatgtcgtgcgggtgcatttagtcacgatggtaca
ttggttgccactggtagtgtagatgctagtataaaaattttagacgttgaccgtatgttg
gctaaatcagcaccagaagatatagaaccaggacgagaacaacaaggtcacccagttatt
cgtacactttatgatcacacagatgaggtggcctttttggaatttcacccaagagaacac
attttggcttctggttcgcgtgatggtaccgtaaaactcttcgatatagccaaaccttca
gtgaaaaaggcacacaaggtattcaccgattgcgaaccggtaaactgcttatcatttcat
cccaccggcgattatatagctattggtacagaacatttcgttctgcgagtttatgatgta
cacacttcgcagtgctttgtaagtgcaataccatcacaacaacacaaggcagctgtgaca
tgcgtaaaatttgcaccaacagcaaagttgtatgctacaggtagtttagatggtgccata
aaaatatgggatggagtcagtggacgttgtatcaatactataccggaagcacatgctggt
gctgaaatttgctcactagagtttacgaggaatggaaaggtaataaaaagtttgtatcga
aagataccttgcaatcagaatactgcgtcaaactattttgcaaactatcttctgaggtag

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