KEGG   Rhagoletis zephyria (snowberry fruit fly): 108366249
Entry
108366249         CDS       T08513                                 
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
rze  Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rze00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108366249
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rze03041]
    108366249
   04121 Ubiquitin system [BR:rze04121]
    108366249
Spliceosome [BR:rze03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    108366249
 Complex C
   U4/U6.U5 tri-SnRNP specific factors
    108366249
Ubiquitin system [BR:rze04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    108366249
SSDB
Motif
Pfam: SART-1 HIND
Other DBs
NCBI-GeneID: 108366249
NCBI-ProteinID: XP_017476070
LinkDB
Position
Unknown
AA seq 951 aa
MGSSSNGKKHKKDKKHKHRSIDGNEEGESSSTHRHHKHKRHKEHKERHRHKKHKERDRER
EKERTHHHTEVIALEESDSDDSSDCVEVPLDDQPVKSYERDIVVEREPPPPPKVTKHHIE
REKDYERLKDLERAKEREKEREWARERDRERERERYEKEREMERRKEKDMERERAERDRE
RERERDRVRDREIREKERERMERDRERERERARDREQRPEPDRHHRDRERERNRPAEKIK
DRHVREKHSPSPIAENGAGDCLSIEETNKLRAKLGLKPLEVDSGPTKPSSSSAAAAVEAK
KVAPGEKELSSYKDEWGEFLHKPASNLKEKAEAEKLREKLKQKKEKRFLEDQLSRIRTLG
ESDEETDDVSKWVSRNRQAVDEKRKAEKRAKMIEEMDAEFGVNDLVEKEKAAARRKAYSD
KHLKGLRVEHDMNEFTEGKTVILTLKDKGVLDEEDDTLVNVNLIDEERYRKNIANKKQNP
LSYGYNVYEEQYDVFGNPIERGILEKYDEDLDGNKKRKDFVIGDSLEEEREHRRKLLEIK
TKLAGKRLETLEDARIKLASDTFSEAELAIFKKPKKKVKKLRKKLKVEDLLSVNDEPIEQ
HLGRRRGRHYDEEILDTDDIKDAASEVKAEEEDEDLERILSKARKLRQKENIIKKPFPID
VNSIKHEIKAEPIDGADGEGGIRGADGNIVLNATAEFCRTLGDIPTYGMAGNRDEDSNDM
MDFETIDGNDDRYNDRHNEPDLNHGTWNSVNPDEIVQPAEFEDIADNIEEVAILDEEPDV
SAGVANALRLALSKGYLEKEEHNRPSNSKMAHLQAKNYSIEDKSAVEDDKFGRRDRFHAG
PIMEFKDKDTFKPNVKLEYIDDNGRILNSKEAFRYLSHKFHGKGPGKNKIEKRLKKMEQE
GLMKTMSSTDTPLGTLTMLQQKQKETKAPFVVLSGGKQTTAVSTATISKYK
NT seq 2856 nt   +upstreamnt  +downstreamnt
atgggttcttcatcgaatgggaaaaaacataagaaagacaaaaaacataagcatcgaagc
attgatggcaatgaagagggagaaagttcatccacgcaccgtcatcacaaacacaagcgt
cataaggaacataaggagcgccatcgtcacaagaagcataaggagcgtgatcgcgaacgg
gaaaaagaacgtacgcatcatcacacagaagttattgctttggaggagtcggattcagac
gatagttctgattgtgttgaagtacccctggatgaccagccagtgaaatcatatgaaaga
gatattgttgttgagagggaaccaccacctccgccgaaagtaacgaagcaccatattgag
cgtgaaaaagattatgagcgccttaaggatttggaacgcgccaaggaacgcgaaaaggaa
agggagtgggctcgagagcgtgatcgagaaagagaacgtgagcgttatgagaaagaacga
gaaatggagcgtcgcaaagaaaaggatatggagcgtgagcgtgctgaaagagatcgagaa
cgtgagagggaaagagatcgcgttcgggatagagaaatacgtgaaaaagagcgtgaacga
atggaacgtgatcgtgagcgagaacgggaacgcgctcgagaccgggaacagcggcccgag
cctgataggcatcatcgagaccgggagcgtgaacgcaacagacctgcagagaagattaaa
gatagacatgttcgagaaaaacactctccgtcacctatcgccgaaaacggggcaggcgat
tgtctatctattgaagaaaccaataaactgcgcgcaaagctgggtttaaaacctcttgag
gtggatagcggtcctacaaaaccttcctcttcctctgctgctgcagctgtagaagccaaa
aaggttgcacctggggaaaaagaactatcttcgtacaaagatgaatggggtgagttccta
cataagcccgcgtcgaacttaaaggagaaggctgaagccgaaaaactgcgtgagaaactg
aaacaaaaaaaggaaaagcggttcttagaggatcagttatcacgcatacgcacactaggt
gaatcggatgaggaaacggatgatgtatccaaatgggtatcacgaaacagacaagctgtc
gatgaaaaaaggaaagctgaaaagagagctaaaatgattgaagaaatggatgccgaattc
ggggtgaatgacttggtagagaaagagaaggcagccgcgcgtcgcaaggcctatagtgat
aagcatttgaaagggttgcgagtagagcacgatatgaatgagttcactgaaggaaaaact
gttatattaacactaaaagataaaggagttttagatgaagaagatgatactttggtaaac
gttaacttgatagacgaagaacgttaccgtaaaaatattgcaaataaaaagcaaaatcct
ctcagttatgggtacaacgtatacgaagaacagtacgatgtattcggcaatccaattgaa
cgcggtattttggagaaatacgatgaagacctcgatggaaataaaaagaggaaggacttt
gtaattggtgatagtttagaagaagaacgagaacatcgtaggaaattgctagagataaaa
acaaaattagcaggaaaaagattggagactttggaggatgctagaataaaactagcgtca
gacacattttcggaagccgagctggcaatattcaaaaaaccaaagaaaaaggtgaagaag
ttaaggaaaaagttaaaagtggaagatctattatctgtgaatgacgaaccaatagagcag
cacttgggtaggcggaggggacgacattatgatgaagaaattttggacactgacgatata
aaagatgcagcttcagaggtcaaggctgaggaagaagacgaggatcttgaacgcattctt
tctaaagcacgtaaattaagacaaaaggaaaacataattaaaaagcccttccccattgac
gtgaacagtatcaaacatgagattaaagcagagcccattgatggtgcagatggcgaggga
ggcattcgtggtgcagatggaaatattgtgctcaatgccactgcagaattctgccgcaca
ctcggtgatatacccacttatggtatggctggaaatcgcgacgaagattccaacgatatg
atggacttcgaaacgattgacggcaatgacgaccgttacaatgatcggcataatgagccc
gaccttaatcatggcacttggaattcggttaatccggatgaaatcgtccagcctgctgag
tttgaggatattgcagataatatagaggaagtagcgattttagatgaggaacctgatgtt
agcgctggtgtagcaaatgctctgcggctggccctatctaaaggttatttggagaaagaa
gagcataatcgtccaagtaattcaaagatggcacacctgcaagcgaagaattactcaatt
gaagacaaatcggcagttgaagatgataaatttggtagacgcgaccgcttccacgccgga
cctataatggaattcaaagataaagatacttttaaaccaaacgtcaaactagaatacatt
gatgacaatggacgtatactgaattcaaaagaagctttccgctatttgtcacataaattc
catggcaaagggccaggaaaaaataaaattgagaagcgtttgaaaaaaatggagcaagaa
ggtttgatgaagactatgagctccacagatacgccattgggtacgcttaccatgttgcag
cagaagcagaaagaaacaaaagcaccttttgtggtgcttagcggtggaaagcaaacaaca
gcagttagtactgcaacgatatccaaatataaatag

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