Rhagoletis zephyria (snowberry fruit fly): 108366365
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Entry
108366365 CDS
T08513
Name
(RefSeq) sodium channel protein Nach
KO
K03440
acid-sensing ion channel, other
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rze04040
]
108366365
Ion channels [BR:
rze04040
]
Ligand-gated channels
Acid-sensing ion channel (ASIC)
108366365
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ASC
Pox_D2
SipA_VBS
Cys_rich_CWC
Motif
Other DBs
NCBI-GeneID:
108366365
NCBI-ProteinID:
XP_017476236
LinkDB
All DBs
Position
Unknown
AA seq
512 aa
AA seq
DB search
MFLHVWKQNAKSNKLKERTKLHQPRRFHSKVLNPQNVAQRLRLAVADTFWEYTQTTKVSG
LWLLRRNRTNGISRWIWSTVLISLFLLGVYLSLKLWLKFYSYPILNTISSDLAITDVAFP
GITICSPKVVNRERVQRYITTLNIPDNIDPHDVAIGLDYINAFTDQNWKAPTQESFRYAD
DVLRFNNKTIYEAAKAVSGSCDDFVKRCYWGITEFPCRQQHEYLSFISTTSYLGPCCSFN
YNPKNLSYVPFSANLFGIDGGLTVVGVEGSERNLSTGLIVLAHHPMDYVTEATSSVTITS
NSESFVEISPTVQSSSTEVLELSQGKRDCLISDDLELHNYRQAACSLACRTEAIMKTCQC
VPYHIPNAVAAYRECKLNDSACYSTNYDEFKSVKCESCLPNCYDVTYSTLAYKTDLKLHN
YSVSPHYMTIDSQDTFIVRAYLTRQTVPAIRKVVVMSWIGLLSDLGGVFNLCLGISMVSL
IEFAYYCTHRLYVNYKARSVLLQPLGHSQNRK
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgttccttcatgtgtggaagcaaaacgcgaaaagcaataaattaaaggagcgtaccaaa
ctccatcaacctcgacgttttcattcgaaagtactgaatccccaaaatgtggcacaaagg
ctgcgactagccgtagcggacacattttgggaatatacgcaaactacaaaagtgagtgga
ttgtggctgctgcggcggaatagaacaaatggcatttctaggtggatttggtcaactgta
ctcataagtctatttctactcggtgtttacttatcgctgaaattatggttaaaattctac
tcatatccaattttgaatactatatcgagtgatctggctataaccgacgtggcatttccg
ggcatcaccatatgtagtcccaaagtagttaatcgcgagcgtgtgcagcgttacataaca
acattaaacattcccgacaacatagatccccatgatgttgccatcggcttggattatatc
aacgcatttaccgatcaaaactggaaagctccaacacaggaaagcttcagatatgccgac
gatgtactacgtttcaataataaaactatatatgaggctgccaaagccgtcagcggcagc
tgtgacgacttcgtcaagcgttgttattggggtatcaccgagttcccgtgtcgtcagcag
cacgaatatctctccttcatatcgacaacttcgtatttgggtccatgttgttcatttaac
tataatccgaaaaatctctcatatgtaccattttctgcaaaccttttcggcatagatgga
ggcttaactgtggtgggcgtcgagggatccgaacgcaatctttcaactggcttgatcgtc
ttggcacaccaccccatggactatgttacagaagccacgtcttcggttacaattacgtcc
aactccgagagtttcgttgaaatctcaccaactgtccaaagctcttcgactgaggtgcta
gaactgtcgcaaggtaaacgcgattgcctcatttcagacgatctcgagctgcataactac
cggcaggcagcatgctcgctcgcttgtcgaacggaagcgataatgaagacttgccaatgt
gtgccctatcacatacccaatgctgtggccgcttatcgcgagtgcaagttaaatgacagt
gcatgttattcgactaactatgatgaatttaaaagtgtaaagtgcgaaagttgtctacca
aactgctatgacgtcacttattcaactttggcctacaaaactgatttaaaattgcacaac
tattcggttagcccacactacatgacgattgactcacaggacactttcatcgttcgcgct
tacttgaccaggcaaacagtgccagcaatacggaaggtggtcgtaatgtcgtggatcgga
cttttatcggatttgggaggagtattcaatttgtgcctggggattagtatggtatcccta
atcgaattcgcctactactgcacacatcgtttatatgtgaactacaaggcccgcagcgtt
ttacttcagccactcggtcattctcagaacagaaaataa
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