Rhagoletis zephyria (snowberry fruit fly): 108366452
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Entry
108366452 CDS
T08513
Symbol
Sin3A
Name
(RefSeq) SIN3 transcription regulator family member A isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
108366452 (Sin3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rze03036
]
108366452 (Sin3A)
Chromosome and associated proteins [BR:
rze03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
108366452 (Sin3A)
REST complex
108366452 (Sin3A)
Heterochromatin formation proteins
Other heterochromatin formation proteins
108366452 (Sin3A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
HHD_RTEL1
GBP_C
Motif
Other DBs
NCBI-GeneID:
108366452
NCBI-ProteinID:
XP_017476361
LinkDB
All DBs
Position
Unknown
AA seq
2261 aa
AA seq
DB search
MMKRTRVDEVQYGTRPGPGGVGGSGGGGGGGVTGGGIVGTSNPGNTVNLGNVVPGSHGSA
NLSVGLSGGIAGGSMPHHRLLTPQHGGAQTIAYLPSTTPASANLKNTGGLVDSSSSGATS
HGSGGNSGSTVQLTGGTVVTSGGGVAGTGNAGAVPTQAVQYSTSYNVSSVSSSGGGNLKT
TSDGPVQIHVSGSAVTNMSNSGSQQNSLRTRTISSSQNISVSGGGGPLTAAPPTLTVQQA
APPPPTSSQQGPPQPGQPGAPPRLKVEDALSYLDQVKFQYADQPQIYNNFLDIMKEFKSH
CIDTPGVIQRVSTLFKGHTELIYGFNMFLPAGYKIEIHSDELGVSIPVVSMPSASPTSLH
GGLQNISGTGSSTIQTPLIRGSASNQSNASNASSSLDHHQLQGNTSSSGGGAVNLMTHGG
ASLSQTTIHALQSSASQPSPSGPAMAQHAHVSVSPAPPTVPQMQNVTVAPVAAAHLPQNF
SRDRERATIAQAVVTSSVAGGPPTLNALGELNPQIHSSSGGSGGGSTVGNAHHNLHHISQ
AHQSILMGETVGQQNQPVEFNHAISYVNKIKNRFQNKPEKYKKFLEILHTYQKEQKVIKE
GSPNQGKTLTEQEVYTQVAKLFGQDEDLLREFGQFLPDATNHQGAQYMSKSHNDHKRANV
GSVGGPLGSGSSGTINSGSGGGHHMSLPSASGSPLHLNSGATLSQIGSSTHAAVLGNLSA
VNTSVSIKSYNNTQQQSQNHVINTSAVSGRSGDLVYDKDYPHQITLHPSGGPLHLKVLHD
GVVSSGGVHHDLNASTGIRSYEKDTHRSNHHALSGLKYPHAPGTNVGGVSSHSSKKSPSY
NSGMVSLGGGGNTAMSGGAMDRSGLGMNYSQQVLGGTHHHLSATRRPAIDDGGSGSGGGG
LGSGPPPPKKHKPICKDVSFSEASRKCTISDAAFFDKVRKALRNPEVYDNFLRCLTLFNQ
EIVSKTELLNLVTPFLSKFPDLLSGFTKFLGQPVTQLSASGAGSGGSGIFGLEEIPMQAA
HRQSNSLGNSAALNDRQGNHQGGELAQDIDLSSCKRLGASYCALPQSIIPKKCSGRTALC
REVLNDKWVSFPTWASEDSTFVTSRKTQFEETIYRNIHRTEDERFELDVVIETNSATIRV
LEGVQKKMSRMSPEDLGRFYLDDYLGGTSQTIHQRAIHRIYGDKAGEIIQGLKKNPSVAV
PIVLKRLKVKEEEWRDAQKAFNKVWREQNEKYYLKSLDHQAINFKPNDMKALRSKNLFNE
IETLYDERHDQDDENGEPVTGPHLMLPYKDKTILDDAANLLIHHVKRQTGIQKQEKTKIK
HILRQFVPDLFFSSRHPLSDDERDDDDNEKMDVDSLVTSSRGEMHAAGSGICKGGRTASG
GSTSNTDASSGAGSSKADGTDPHDKNASTMSSASGNLLENLKSSESTATISISNSTTSTT
SGDGNNAAQLPPTTLSVGEKAPSSKDSNPALAKGQVINSNATEDANNGSRTPAEAATNSN
TAVVTTTTVLTSTSTALTTSENKTKSSCTGISTSSGDNSAAAHKCDTAQVGTPTNATAPT
TLKGSATKEANEKTNCTAADTTTAVTNVTSTSASAATLAQPSGSNSLADIKVEIKEEKQD
MDVDIQLPPHAISKHLDESYTLFFANNNWYLFLRLHTILCERLRTMYERAQLLAVEEERH
RSKRRESTATALRLKPKSEIQVEDYYPTFLDMLKNVLDGNMDSNTFEDSMREMFGIHAYI
SFTLDKVVSNAVRQLQNCVTERGALECVELFHNEQRRGGAGGYCRDAHKNYAKELAYQRK
AEASLHEENCFKVYIYKIDCRVTIELLDTEVEDSEKPVNKVKSWSKYVDRLVNPGANSIV
GQNAVGSTNSPSAGVTGSAAGIASNVNTSSNASNTNAVGISAISSTVFDANGSEIKVERM
DDDALDAHITRKARFLKRNKRMACLRAEQQARLQQLKATSTANASVAASTSNATADALRS
SVVSGSAGSGGAATPDSASLSTKNNNPPTVGAGEPLWTWNKRPPERVGSIVVGSGAEKYF
VNDRDEIKFNSSGRQVITINKNLQLFKWDSVRRAKLSHSFVTQRKQKLFQRFTQKWLAEH
VSDQLQQQCADWLLGKTVPNSSSVNWALKTKVIPQNDVKRTPYRVYNRYKVTFSGSSGGA
NSIVAGASGSGGSGGTNAPIADSTPATSIAPTTSHGNSSVQPPSNVSVSAAVSTSSAPTT
HSSASGVAVTTKVLTSSADVTKLSTAGSNSGLGNNNRQLES
NT seq
6786 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaacgtacgcgtgtggatgaagtccaatatggcacgcgacctggccctggtgga
gtgggcggcagtggcggtggaggtggtggtggagtcactggcggtggtattgtgggcacc
tccaaccctggcaacactgtgaatcttggaaatgtagtccctggtagccacggtagtgcc
aatttaagtgttggactatctggaggtatcgctggcgggtccatgccccatcaccgactt
ttaacaccgcaacatggcggtgcccaaacgattgcttacttgccatcgacaacaccagca
tcggccaatttgaaaaatactggcggactagtggatagtagtagcagcggtgcaacaagt
cacggtagtggtggcaacagcggcagtacagtgcagttaactggaggaacagttgttacc
tctggcggtggagttgcgggcacgggcaatgcaggagctgttcccacacaggctgtgcag
tattcaacttcctacaatgtgtcctccgtatcttccagtggcggtggtaatttgaaaact
acatcagatggacccgtgcaaattcacgtgtcgggaagcgctgtgactaatatgtcgaat
tctggatctcagcaaaattctctgcgaactcgcaccattagctcctctcagaatatctct
gttagcggcggtgggggcccattgacggcggcgcctccaactttgacagtgcagcaagca
gcaccacccccaccaacatcgagtcaacaaggtcctccacaacctggtcagccaggtgca
cctccacgtcttaaggttgaggacgctctgagttatttggatcaagtgaagtttcaatat
gctgatcagccacagatctacaataattttttggacataatgaaagaattcaaatcgcat
tgtattgatacacccggagttatacagcgagtatctaccctgtttaaaggtcatacagaa
ttaatttacggctttaatatgtttctaccagcgggttataaaattgaaatacactcggac
gagttgggcgtgtctattcctgtggtatctatgccgtcagcttcaccgacaagcctacat
ggcggtctgcaaaatatcagtggcaccggctcctcaaccattcaaactcccttaatcaga
ggcagcgcttcaaatcagagtaatgctagtaacgcttctagcagcttagatcatcaccaa
ttacaaggcaatacaagcagcagtggtgggggggctgtcaatcttatgacacatggtggg
gcttcgttgtctcaaacaacaatacatgcattacagtcatcagcttctcaaccctctcca
agtggaccagcaatggctcagcatgcacatgtttccgtatcaccggcaccacctactgta
ccgcaaatgcagaacgtgaccgtggcaccggttgcggcagcacatttaccacaaaatttt
tcccgagaccgagagcgtgccactatagcacaagcagtggtcactagtagcgtagccggc
ggtccacccacactaaatgcgctcggcgaattgaatccacaaattcacagcagcagcggc
ggtagtggtggtgggagtactgttgggaatgcgcatcacaatctccaccacatttcgcag
gcgcatcaatcaatactcatgggtgagacagttggtcaacaaaatcaaccagtcgagttt
aatcatgccatatcgtatgtaaataaaattaagaatcgcttccagaataaaccagaaaaa
tataaaaaattcctcgaaattctacacacttatcaaaaagaacagaaagtgattaaggaa
ggtagtcccaatcagggaaaaacgctaaccgagcaagaagtctacactcaagtagcaaaa
ttatttggtcaagacgaagatttactgcgggagtttgggcaatttcttccggatgctacg
aatcaccaaggcgcccaatatatgtctaaatcgcacaacgaccataaacgcgcaaacgtt
ggctcagttggtggccctctgggtagcggcagtagtggcacaataaatagtggaagcggt
ggtggtcatcacatgtccttgccatcagcctctggctctccgttacatctgaatagcggc
gctacattgtcacagattggtagtagtacgcatgctgccgtattgggcaatttatcggct
gtaaataccagtgtaagcattaaatcgtacaacaatacgcagcaacagtcgcaaaatcat
gtgattaatacgagtgcagtaagcggtcgtagcggagatctcgtctacgacaaagattat
ccacatcaaataaccctacaccctagtggcggcccacttcatttaaaggtgctacatgat
ggtgttgtaagcagcggcggtgtccatcatgatttgaacgcttcgacaggaatacgtagc
tatgaaaaagacacgcatcgcagcaaccaccatgcgcttagtggtctgaaatatccgcat
gcacctggaacaaatgttggcggcgtttccagtcactcgtctaagaagtcaccaagctac
aattcaggtatggtctcgttgggcggcggaggcaatacagctatgagtggtggtgccatg
gatcgttctggattgggtatgaactattcacagcaagttctgggtggcacacatcatcat
ttgtcggcaacgcgccgtcctgcaatagatgatggcggtagcggcagcggtggtggaggt
cttggcagtggcccaccaccgcctaaaaagcacaaaccaatttgtaaggacgtatcattt
tcggaagcttcgcgcaagtgtaccatctccgacgctgcatttttcgataaagttcgcaaa
gcattgcgtaatcccgaagtatatgacaatttcttgcgttgtctgactcttttcaatcag
gagattgtgtcgaagactgaattgttaaatttggtaacgccattcttgagtaaattcccc
gatttactaagcggatttactaaatttctgggacaaccggtgacccaattgtctgcgagt
ggtgctgggagcgggggatctgggattttcggtttggaggaaatacccatgcaggcagcg
cataggcaaagtaatagtcttggtaattctgcagcactcaacgatcgacaaggtaatcac
cagggtggtgaattggcacaggatatcgatttatcatcatgtaaacgacttggtgcatcc
tattgtgcgctgccacagtcgattataccgaagaaatgttctggacgaacagcgctttgc
cgtgaggtactaaatgacaagtgggtttcattcccgacttgggctagtgaggattccaca
tttgtgacatcgcgcaaaacgcaattcgaggaaacaatttacaggaatattcacaggacg
gaagatgaacgcttcgaattggatgtagtgattgaaactaatagtgcgacaatccgtgtt
ctcgagggtgtgcagaagaaaatgtcacgcatgtccccagaggatttgggccgattttat
ttggacgattacttgggtggcacttcgcagacgatacatcaacgcgctatacatcgcata
tacggtgacaaagcgggagaaataatacaaggtctaaagaaaaatccttccgtagcagtg
ccaatcgtactgaagcgtttgaaagtcaaagaggaggaatggcgcgatgcccaaaaggcc
ttcaataaggtgtggcgtgaacaaaatgagaagtattacttgaagtcacttgatcatcaa
gcaatcaatttcaagccgaacgatatgaaggcattacgctccaaaaacttattcaacgaa
atcgaaacgttatatgatgagcgccatgatcaagatgacgaaaatggtgaacccgttact
ggaccacatctcatgctgccatataaagataaaactatacttgatgatgctgcgaatttg
ttaattcatcatgttaagcgtcagacgggaatacaaaaacaggaaaagactaaaatcaag
cacattttacgacaatttgttcccgatctatttttctcgtcacgccatccattaagcgac
gatgaacgagatgacgatgacaacgaaaagatggatgttgattctctcgtcacaagtagc
aggggggaaatgcatgccgccggtagtggtatctgcaagggaggtaggacggcaagtggt
gggagcacatctaataccgatgcatcaagcggtgctggcagctctaaagccgatggtact
gatccccatgataaaaatgcatcaacaatgtcgtcagcaagtggcaatttgttggaaaat
cttaaaagtagtgaatcaactgcaacaataagcatcagtaatagcaccacctcgactacc
agtggggacggtaataatgccgctcaattaccgcccacaacgttgtctgtgggtgaaaaa
gccccgtcctcgaaggattcaaaccctgcacttgctaaggggcaagtaatcaatagcaat
gctaccgaggatgccaataatggcagcagaacaccagctgaggcagcaactaactccaac
acagcagtagtcaccacaactacagtactaacatcgacatcgactgcgctaacaacgtct
gagaataaaaccaaatcgagttgtactggaattagcacaagttcaggagacaacagtgca
gctgcccataaatgtgatactgcacaagttgggacgccgactaacgctacagcaccaacg
acgttaaaaggctccgcgacgaaggaggcaaatgaaaaaaccaattgcactgctgctgat
accacaaccgcggtcacaaatgttacatcaacaagcgcatctgctgcaactctggctcag
cccagcggaagtaattctcttgctgacataaaggttgaaattaaggaagaaaagcaggat
atggacgtggatatacaattgccacctcatgccataagcaagcatttggacgaatcctac
actcttttctttgccaacaacaactggtatttattcttgcgcctgcataccattctatgt
gaacgcttgcgaacaatgtatgaacgagcgcaattactggccgtcgaagaggagcgccat
cgctcaaagcgtcgcgaaagcacagcgacagcattaagactgaaaccgaaatctgaaata
caagtcgaggattactaccccacattcctggacatgcttaagaatgtacttgatggcaat
atggactcgaatacattcgaggattcaatgcgtgaaatgttcggtatacacgcatacata
tcctttacgctcgacaaggtggtttcgaatgctgtgcgtcaactacaaaactgtgtcact
gaacgtggtgcactagagtgtgttgaattgttccataatgagcagcgacgcggcggtgca
ggtggttattgtcgcgatgcgcataagaattacgccaaagaattggcgtatcaacgcaag
gccgaggccagtctccatgaagaaaactgcttcaaagtgtatatttataaaattgactgt
cgagtaacaatcgagctgctcgataccgaagtagaagatagcgaaaaacctgtgaataag
gtgaaatcgtggagtaaatacgttgatcgcttggtcaatccaggggccaatagtattgtt
ggtcaaaatgcagttggttctacgaactcgcctagtgctggtgtgaccggtagtgcggct
ggtattgccagtaatgtaaatacctcgagtaacgcgtcaaatacgaatgcagtgggcata
tcggcaatatcaagtactgtgtttgacgctaacggtagcgaaattaaagtggaacgcatg
gatgatgacgcactggatgcgcacatcacgcgcaaggctcgtttccttaaacgtaacaaa
cgcatggcttgcctacgtgccgaacaacaggcgcgtttgcagcaattgaaagccacttca
acagctaatgcatctgttgctgcatccacatcaaacgctacggccgatgcgctacgatcc
agtgttgtgagtggaagtgctggcagcggcggtgccgcaacacccgatagcgcttcatta
tcaactaaaaacaataacccaccgactgtaggcgccggcgaaccactctggacctggaac
aaacgaccgccagagcgcgtgggaagcatagtggtgggcagtggcgcagagaagtatttt
gtcaatgaccgcgacgaaatcaagttcaactcatccggccgtcaagtgatcacaattaac
aagaatctccaactgttcaaatgggactcagtgcggcgcgcaaaactgtcccattcgttc
gtaacgcagcgcaaacagaaactgttccaacgttttacacagaagtggttggcggaacat
gtaagcgatcaactgcaacaacaatgcgccgattggttgcttggcaagacagtgccaaat
agcagtagtgtaaactgggctttgaaaacaaaagtgataccacaaaacgatgtgaaacgc
acaccatatcgtgtttacaatcgttacaaagtgactttcagcggcagcagtggtggtgca
aacagcattgtcgccggtgccagtggcagtggcggtagcggcggtactaacgcgccgata
gcggactctacgccagcaacatcaatcgcgccgacaacatcccacggcaatagtagtgtg
cagccgccatccaacgtttcggtctcggctgcagtatcaacatcatcagcacccacaact
catagcagtgcgagtggcgttgcggttacgacaaaagtgttaacatcttcagcggatgta
actaaattgtccacagctggcagcaatagtggcttgggcaacaacaatcggcagctagaa
agttga
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integrated database retrieval system
