Rhagoletis zephyria (snowberry fruit fly): 108366497
Help
Entry
108366497 CDS
T08513
Name
(RefSeq) protein shuttle craft
KO
K12236
transcriptional repressor NF-X1
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rze03000
]
108366497
04121 Ubiquitin system [BR:
rze04121
]
108366497
Transcription factors [BR:
rze03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
108366497
Ubiquitin system [BR:
rze04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
108366497
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-NF-X1
R3H
PAM2
Motif
Other DBs
NCBI-GeneID:
108366497
NCBI-ProteinID:
XP_017476407
LinkDB
All DBs
Position
Unknown
AA seq
1290 aa
AA seq
DB search
MSANPLSSLSQIWQGAFGSSLGTAIADDTNRQQQLQTKFQNSEFPRNPPTTFNMNTSNNN
IASVGDAAGARNSNNYVNFNQFIMQHNLLGNNNGFGLNGGVTDMLGNGNEHGAVGGSNSA
NTNASCTQISVNEGGVNNDYLNFGDVMTNKIQNGSGGDAALGESTMQSTNLFSNSLFSPY
GNDSSLYSNNGLSGGGYHSYNSANTNFNYFDNIYTPFGNSGGYYMNPFATGFDFNASNLQ
ASAPEFVPRFNNLSLNEGNLENSKTQSQQEVNETVSNVAKPDTKNFEIRAINDLPQENQG
AVLLENDNKILNGLGSSTIAAVAGDSGGGDNVPLTAIEDNATKNVAKIDLSANFSIPVQQ
QPQKLGTKAGYAEMPDNKRQSNDTHIMANTNLFNPNSTGSSSCSAGGVGSRYTGTTNKQQ
ASNGNGSRGSSSNGYSRSGHDYTGSSHNYERNGGGGNKHNNDSLDKSEKPSARAERERER
DRDARRYQNGRRSVDYHRSNKRRDDWNRNRDRINGFRVEEKYSIDNGKDSPLPSPEKKSS
PKKVYPENEKLSQREKLIRDIETRRLECLVCVEPIKAHHAVWSCNNCYHILHLQCIIKWA
SSSKSEDGWRCPACQNVVKEVPRDYYCFCGKVKNPPYTRHDIAHSCGDTCRRVEGCIHAC
TLLCHPGPCPPCQAYVKRECGCGKTTKTMQCCVKEAIECESICGKLLNCEQHKCPAKCHE
GKCAPCAEKVEQQCHCTKQERQVACTRDSHDKHSYSCGKPCGKDLACGNHKCKDCCHPGE
CRTCKLSPEVVTSCPCGKMPIVVGQRQSCLDSIPVCEGVCGKTLRCGKPAHPHHCTSKCH
LGNCPPCNKQTAVKCRCGHMDQLIKCRQLSTRADDARCKKRCVKKRSCGKHKCNQECCID
IDHICPLPCNYTLSCGKHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKRP
ACKRLCSRSHPCQHPPQHNCHSASNCPPCMMFTTKWCFGKHEQRKTIPCSQESFSCGLAC
GKALPCGRHKCIKTCHEGACQTPGEVCKQHCPKLRSTCGHKCMSPCHDGDCPDTPCKEMV
EVQCECGNRKQMRLCHDLAREFSRIATAQLASSMAEMQRGNYMELSEILAPVKINKTNKT
LDCNEECRLLERNRRLAIGLQIRNPDVPQKLQTKYSDFIRNFAKRDPTLVKSIHDALTNL
VKLAKESKQKSRSHSFPTMNREKRQLVHEMCEMFGVESVAYDAEPNRNVVATAYKDRSWL
PATSIMEVVQRESGQRRVPVPSNNAWGMKR
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcaaatccgctatcgagtctatcacaaatttggcaaggagcatttggtagttcg
ttaggtacagcaatagcagatgatacaaatcgacagcagcaactacaaactaaatttcaa
aacagcgagtttccgcgcaacccaccaacaacttttaatatgaatacaagcaataataac
attgcttctgttggtgacgccgcgggcgccagaaacagcaataattatgttaatttcaat
caattcataatgcagcataatttattgggtaacaataatggttttggtcttaacggagga
gttactgacatgctaggaaatggaaatgaacatggtgcagttggtggctcaaattctgct
aatacaaatgcatcttgcacacaaatcagtgtaaacgaaggtggtgtcaataatgattat
ttaaatttcggcgatgtcatgaccaataaaattcaaaatgggtcaggaggagatgctgca
cttggggaaagtacaatgcagtctaccaatcttttctccaatagcctcttttcgccatat
ggcaacgacagcagcctttactccaacaatggccttagcggtggtggctaccactcgtat
aatagcgcaaatacaaattttaattactttgacaatatttacacgcctttcggcaacagt
ggcggctattatatgaacccctttgccactggctttgattttaatgcttcaaatttgcaa
gcctcagcaccagaattcgtaccacgcttcaataatctcagtttaaacgagggaaattta
gaaaatagcaaaacacagagtcaacaagaagttaatgaaactgttagcaacgtcgcaaaa
ccagacacaaagaattttgaaatccgggcgatcaacgatttgcctcaagaaaatcaaggc
gcagtgttacttgagaatgataataaaatattgaatggtctcggcagcagtaccatcgcc
gctgttgctggtgatagtggtggtggggataacgttccgttgaccgcaattgaagataat
gcaacaaagaatgtagcaaaaattgacttgagtgccaatttctcaataccggtacagcag
caaccacaaaaattgggcacaaaagcagggtatgctgaaatgcccgacaacaagcgccaa
agtaatgacacacacataatggccaacactaacttgtttaatccaaattcaactggttct
tcatcctgttctgccggtggtgttgggtcgcgttataccgggaccacaaacaagcaacag
gcctccaacggcaatggttcgcgtggttcatcatcgaatggttattcccgaagcggtcat
gactacaccggttcatctcacaactacgaacgtaatggaggcggtggcaataagcacaac
aatgatagcctggataaatcggaaaaaccttcagcacgtgctgaacgtgaacgtgaacgc
gatcgagatgcccgtcgctaccaaaatgggcgacgttctgttgactatcatcgtagcaac
aagcgtcgtgatgattggaatcgtaatcgggaccgtataaatggttttcgcgtagaagag
aaatactcaatcgataatggcaaggacagtccgttaccttcgccggaaaagaaatcttca
ccgaaaaaagtctaccctgaaaatgagaaattgtcacaacgtgaaaagctcatacgtgac
attgagacacgtcgtttggaatgtttggtttgcgtagagcccatcaaagcacaccatgcc
gtttggtcctgcaacaattgttatcacatacttcatttacaatgtatcatcaaatgggct
tcatcatccaaatcagaggacggttggcgttgtcctgcatgtcagaatgtcgtgaaggag
gtgccacgcgactactattgcttctgcggcaaggtaaagaatccaccctatactcgtcac
gatatcgcacactcctgtggtgacacctgccgtcgtgtcgaaggttgcatacatgcttgt
accctcctttgtcatcccggtccatgcccaccatgtcaggcctatgtgaaacgcgaatgt
ggctgcggcaaaacaaccaagacaatgcaatgctgcgtgaaagaagccattgagtgcgaa
tcaatttgtggaaaattattgaactgtgaacagcacaagtgcccggctaaatgtcacgaa
ggtaagtgtgcgccatgcgccgaaaaggtggagcaacagtgccactgcaccaagcaggag
cgtcaagttgcctgcacacgcgactctcacgataagcacagctactcatgcggcaagccg
tgtggcaaagatttagcttgcggtaatcacaagtgtaaggactgttgtcacccgggcgaa
tgtcgcacatgcaaacttagtccggaagtggttacctcgtgtccatgcggtaaaatgcca
atcgtcgttggccaaaggcaatcctgtttggattctataccggtgtgtgaaggcgtatgc
ggtaagaccctgcgttgtggtaagcccgcacatcctcatcattgcaccagcaaatgtcac
ctgggtaattgcccaccatgcaacaaacagaccgccgttaagtgtcgttgcggccatatg
gaccagcttatcaagtgtcgtcagctgtcgacgcgtgccgatgatgcacgctgcaagaag
cgttgcgttaagaaacgttcgtgcggcaagcacaaatgtaatcaggaatgctgcatcgat
atcgatcacatctgtccgttgccatgcaactatacgctatcatgcggcaaacacaaatgc
gaccaaccctgccaccgcggcaactgtccgccttgctatcgctcgtcctttgaggaactg
tactgtgaatgtggcgccgaagtcatctatcccccagtgccctgtggcaccaaaaggcca
gcctgcaagcgtctttgctcgcgctctcatccctgtcaacatccaccacagcacaattgt
cactctgcatccaactgtccaccatgcatgatgttcaccacaaagtggtgtttcggtaag
catgaacagcgcaaaaccattccatgctcgcaagagagtttcagctgtggcttggcatgc
ggcaaggcactaccttgtgggcgtcacaagtgcatcaaaacctgccacgagggtgcatgt
cagacgcctggcgaggtgtgcaaacaacattgccccaagttgcgctccacatgcggccac
aagtgcatgtcgccatgtcatgatggcgattgcccggatacaccgtgcaaggaaatggtc
gaagtacaatgcgagtgcggcaaccgtaaacagatgcgtttgtgccacgacttggcacgt
gaattcagtcgcattgccactgcccagttggcctcttcaatggccgaaatgcaacgcggc
aactacatggaactaagcgaaattctcgcccccgttaaaataaataaaacaaataaaacc
ttggattgtaacgaagaatgccgtttgctcgaacgcaatcgtcgcctggctatagggcta
caaatccgcaatcccgatgtgccgcaaaaactacaaaccaaatattctgattttatacgc
aattttgctaaacgtgaccccactttggtaaaatccatacatgatgctctaaccaatttg
gtaaagctcgctaaggagagcaagcagaaatcacgtagtcactctttcccaacaatgaat
cgcgaaaaaaggcagctggtgcatgaaatgtgcgaaatgtttggtgtggagtcggttgcc
tacgatgcagagccgaatcgtaacgtggtagctacagcctacaaggatcggtcctggttg
cctgctaccagcatcatggaggttgtgcagcgcgagtctggtcagcgtcgtgtgcctgtg
ccgagtaacaatgcttggggaatgaagagatag
DBGET
integrated database retrieval system
