Rhagoletis zephyria (snowberry fruit fly): 108366926
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Entry
108366926 CDS
T08513
Name
(RefSeq) ATP-dependent RNA helicase eIF4A-like
KO
K03257
translation initiation factor 4A
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rze03019
]
108366926
03012 Translation factors [BR:
rze03012
]
108366926
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rze04147
]
108366926
Messenger RNA biogenesis [BR:
rze03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
108366926
mRNA cycle factors
Stress granule specific factors
108366926
Translation factors [BR:
rze03012
]
Eukaryotic type
Initiation factors
eIF-4
108366926
Exosome [BR:
rze04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108366926
Exosomal proteins of bladder cancer cells
108366926
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_22
UvrD-helicase
Flavi_DEAD
CMS1
DUF1198
tRNA-synt_1b
AAA_30
Motif
Other DBs
NCBI-GeneID:
108366926
NCBI-ProteinID:
XP_017476905
LinkDB
All DBs
Position
Unknown
AA seq
385 aa
AA seq
DB search
MAEGEIDSNYVDVDTFDKMELKDELLRGIYAYGFEKPSAIQQRAILPCISGKDVIAQAQS
GTGKTATFVISILQRIDTTINECQALILAPTRELAQQIQKVVFALGDHLHVKCHACIGGT
NVVNDINTLENGTHILVGTPGRVIDMVQRGYLKTKTIKIFVLDEADEMLSRGFKEQIYDV
FQALDYEVQVILLSATMPQDVFEVTTKFMREPIKILVKKEELTLEGIKQFFVNVIHEKDK
LTTLIDLYNCLTITQAVIFCNTRKRVQWLSDQLKANDFTVSSMHGDMDQKTREKIMQEFR
SGSSRVLITTDLLARGIDVQQVSLVINFDLPINYENYIHRIGRSGRFGRKGNAINFVTND
DISHLKGIEDFYNTTIRELLDYDHM
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggcagagggggaaattgattccaattacgtggatgtcgacaccttcgacaagatggaa
ctgaaggatgagcttctccgaggcatctacgcgtacggttttgagaaaccttcggctatt
cagcagcgcgccattttgccctgcatttctggcaaggacgtcatcgcccaagcgcagtct
ggtaccggcaaaaccgccaccttcgtaatctcgattctccagcgcattgataccaccatc
aacgaatgccaagccctcatcctcgcacccactcgcgagctggctcagcagatccaaaaa
gtcgtctttgctctcggcgatcatctgcacgtcaagtgccatgcttgcattggcggcacc
aatgtcgtcaacgacatcaacactctcgagaacggtacccacattcttgtgggcacccct
ggccgcgtcatcgacatggtccagcgtggctacttgaagaccaagacgatcaagatcttc
gtcctcgatgaggctgacgagatgttgtctcgcgggttcaaggagcaaatctacgatgtt
ttccaggctctggactacgaggttcaggtcatcctgctctctgcgaccatgcctcaggac
gtgtttgaggtgacgaccaagtttatgcgcgaaccaatcaagatcttagtgaagaaggag
gaactcaccctggaaggtattaagcagttcttcgtcaacgtgatccacgagaaggacaag
cttaccactctgatcgatctgtacaactgcctcaccatcacccaggcagtcatcttttgc
aatacccgtaagagggtgcagtggctctctgatcaactcaaggccaacgactttaccgtt
tcttcgatgcatggtgacatggatcaaaagactcgcgagaagattatgcaagaattccga
agcggctctagccgtgtcctaatcaccactgatcttctggctcgaggcattgacgtgcag
caagtttcgctcgtcatcaacttcgacttgcccatcaattacgagaactacattcacaga
atcggtcgaagtggtcgtttcggccgcaagggaaatgccatcaactttgtcaccaacgac
gacatcagtcatctcaaaggcattgaggacttctacaacaccaccattcgagaactcctc
gattacgaccacatgtaa
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