Rhagoletis zephyria (snowberry fruit fly): 108366949
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Entry
108366949 CDS
T08513
Name
(RefSeq) vacuolar protein sorting-associated protein 35 isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108366949
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rze04131
]
108366949
Membrane trafficking [BR:
rze04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
108366949
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
108366949
NCBI-ProteinID:
XP_017476931
LinkDB
All DBs
Position
Unknown
AA seq
830 aa
AA seq
DB search
MYPWNSTSYSPSGGGGVSSERRMTMPSGLDDQEKLLAEAIGTAKKQAFQMNHFLDKDRIL
DALKCASTMLSELRTSMLSPKSYYELYMAITDELCHLELYLSEKANKDTDYYELVQYSHT
IVPRLYLLITVGIVYIKKDSTLKRSILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPD
VLVAENEHHGNVLDAIDFVLTNFGEMNKLWVRMQHQGHSSEKSRREKEREELKILVGTNL
VRLSQLESATLEHYQRYILPGILEQVVSCRDAIAQEYLMECIIQVFPDEFHLQTLDPFLK
SCAQLETGVNVKNIIISLIDRLAAYNQRSGKTSGTDIESIIPPEVQLFEVFSIQVANIVQ
TRTDMPLEDTISLQIALLSLAQKVYPDRVDYVDKVLGTTTQILESLEMNNISHFLSVNQE
LSRLLRICIDFYNNALTVIQLKNFTPLLDKFDYVSRKSVALYLVMNVLEFETLIPTAEQT
EHVLTIITPLIKDEEVPIGPDGKPVPQPVNGNNVDPEEFAEEQGIVARFIHYIKSDEPDM
QYKILQSARKHLGAGGPQRIKHVLPPLIFSAYQLAYKYKAIAEEDENWDKKCQKILQYCH
STIAAIAKADLADLALRLYLQGALVIGEIGYSNHETVAYEFMTQAFSLYEDEISDSKAQL
AAIMLIMSTFEQMACFSEENAEPLRTNCALAASKLLKKPDQCRGVVACAALFWSGKKNGE
EMRDEKRTLECLKKGARIIAHCLDVGVQVQLYVELLNHYLFYFERGNSLITVAMLNQLIA
KINEDLPNLESTEETKQIEMHYKNTLAHIKSRMESNDAGLEVSFAGISIN
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgtatccatggaattcaacatcttacagcccaagtggcggtggcggtgtcagtagcgaa
cgccgcatgactatgccgagtggtctagacgatcaggagaagcttttggccgaagctata
ggcacagcgaaaaaacaggcattccaaatgaatcacttcctagacaaggatcgcatattg
gatgcgcttaaatgtgctagcacaatgctgagcgagctgcgcacctccatgctctcgccg
aagagttactatgagttatatatggccatcaccgatgagctttgccacctggaattatat
ttgagcgaaaaagccaacaaagatacggattattatgaacttgtgcagtattcgcataca
attgtgccacgtctatatctgctcattaccgtcggtattgtgtacatcaaaaaagattcc
acgcttaagcgtagtatactcaaagacttggtagagatgtgccgtggtgtgcaacatcca
ctacgtgggctattcctacgcaattatttgctgcagtgcacgcgcaacatattgccagat
gtgcttgtggcagaaaacgaacaccatggcaatgtattggatgccatcgatttcgtcttg
acgaactttggagagatgaataaattatgggtgcgtatgcagcatcagggccactctagc
gaaaagtcacggcgcgagaaagaacgtgaagagctaaagattttagtgggcacgaacctg
gtacgtctttcgcaactcgaatctgccacgttggaacactaccagcgctatatattgcct
ggtatattggagcaggtggttagttgtcgcgatgctattgcacaagagtacctaatggag
tgtattatacaagtgtttcccgatgaattccatctgcaaaccttagatccgttcctaaag
tcgtgtgcccaactggaaactggtgtaaacgtaaaaaatataataatttctttgatcgac
cgcttggcggcctacaatcagaggagtggcaagacaagcgggactgacattgagtccatt
ataccgcctgaagtgcagttatttgaagtgttcagcattcaagtggcaaatattgtgcag
actcgcaccgatatgccactggaagacacgatatctctgcagattgcgctgctgagtctc
gcgcaaaaagtttacccagatcgcgttgattatgtggataaagtgcttggcaccacgaca
caaattttggagagcctagaaatgaataacatttctcatttcctgtcggtaaatcaagaa
ttatcgcgtctcctacgcatttgcatcgatttctacaacaacgcactgactgttatacaa
ctaaagaacttcacgccactactagacaagttcgactatgtttcacgaaaatcagtggcc
ctctatttggttatgaatgtgcttgaatttgaaactctcataccaacagctgaacaaact
gaacatgtactgaccataatcacaccgctaatcaaagacgaagaagtgcccattggtccg
gatggcaaaccagttccccaaccagtcaatggtaataacgtcgatcccgaagaattcgcc
gaggagcaaggcattgttgcgcgtttcatccactatataaagtccgatgaacccgacatg
cagtataaaattctacaatccgcacgcaagcatctgggcgccggtggcccacaacgcatc
aagcatgttctaccgccactcatcttttctgcctaccaattggcctataaatataaggca
atcgctgaggaggacgaaaactgggataagaagtgccagaaaatattacaatactgccac
agcacaattgcggcgatagccaaagccgacttggccgatctggcgttgcgtttgtaccta
caaggtgcgctggttattggtgaaataggttactcaaatcacgaaacagtggcttatgaa
tttatgacgcaagcattctcactgtacgaggatgaaatatctgattcaaaggcacagttg
gcagcaattatgcttatcatgtccacattcgaacaaatggcatgctttagtgaagagaac
gctgagcctttgcgcacaaattgtgcgcttgcagcctctaaactattgaagaagcccgat
cagtgccgtggtgtggtggcgtgcgctgcgctcttctggagtggcaagaaaaatggtgag
gagatgcgtgatgagaaacgcacgctggagtgtttgaagaagggcgcacgtataattgcg
cattgcttggacgttggtgtacaagtgcagctatatgtcgaattgttgaatcattatctc
ttctatttcgaacgtggtaattccctgattactgtggcaatgttaaatcagcttatcgcc
aaaatcaacgaggacttaccaaatctggagtccacagaggagactaaacaaatcgaaatg
cattacaaaaacacattagcgcatattaaaagccgcatggaatcgaacgatgcgggcttg
gaggtttcattcgccggcatttccataaattag
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