| Entry |
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| Name |
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
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| KO |
| K13171 | serine/arginine repetitive matrix protein 1 |
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| Organism |
rze Rhagoletis zephyria (snowberry fruit fly)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:rze00001]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108367159
03015 mRNA surveillance pathway
108367159
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:rze03019]
108367159
03041 Spliceosome [BR:rze03041]
108367159
Messenger RNA biogenesis [BR:rze03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
108367159
Spliceosome [BR:rze03041]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
108367159
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
Unknown
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| AA seq |
1247 aa
MFHVFSKGTTQQQDTRFSDKEKKLMKQMKFGDCLNKRVDMSKVKLDVLRPWISKKITDIL
HIEDDVVVEFVYNQLEEEKFPCPKKMQINMTGFLNGKNARQFMGELWALLLSAQESESGI
PAEFIQQKKDEILKREEQQRQNDRSRSRDRDRERDRDRDNERDRDRDRRSGRDRSHDGQR
DELSQREQQLPPSTLSAIEQVRSQLSAKSRSNSAEDTNLGSVSQSKQIEGGIAASVNAAA
AAAAAAIIRDRSRSPNASARSAAAEAAATKIRNRSPRKRSRERSVTRKSSRERNSSPQRR
RNSSRDRRRSSRSPRRRSSGGGGDRRRRRSRTRSRSRDRSGRRPPSKKRQLSRSASPPKR
QSPKSKSRRSKDRRSRSRSISKSPVKRKSSPAPTSNTKNRTSPPYRKRSTSRNSNPHTPV
NGHEDGGSAKKRDVKKRSPSRNPSEHSRLSTEDKRPARKPSKGRSRSRSPSKRSVRGAAS
SRSRSRSRSSSRSSRASIRSNKKPIRRSSSRNTSLSPSPDRKDDFEIRRNKNSVQKKRHY
RHNRDSSASSIDRERDRDGGRRMMGDNRGRRGDMPGRRFSPRNRSPRNDSGGGRMQRSRS
RRRSNSRNRSRSRNRSRSPMRRSRSPRRFNRRRSPMMHFRGRGGNNRGRMNFWRRSPSMG
RGGGGGGRFNRRFSPQRRFSRDRDRDRRMSPMQNQFRKFSPPPRRFSPQQNMPYQRRSRE
RRFSPGPRDRRPSSPIRDNSRDRGGGNNFGRWDQNNRNPPPKAKSRSSSASSNWELEEET
AAPPPVARQPSTTKQTSPIKNNGDRARSARRSRDRSDRDSSQSSEKIPKARESLVRRSSV
EFAGPSVKTIDLSKDERGENRKAKPEAVQIEAPPVKKPAPTVAAVTAAAPVLRNEKLRDR
YSSSLSRTPSPFLKPHEREKLQPTAVKKTQDSKPQKSHKESYSSSSDSSGDSDDSEEDEE
RNAIEKVKETKKKNIESRSKTKRRKSDTSDDSDDESEEEKSKKKSNAKALAKSQTLVELP
PIAKPGRKDKNLPTEEIREDRNAVELQASRAKGKHNIDVPEVAVPSSSKANKKLSEKTIS
KDNVSSNSSDDSEKEHSDGKKSEVKAKQAVSRKRTASISGLKKSKRAASSESDDEHVSKK
KRKKAKKSAKRKSTDEDSSSDSEAEASSKKKKHKKHKKHSKKSKKHKKHKKKSKKADSSS
SSDNDDEEVRERTGKAITSAPLLLGGVNEDLEKQLRERALKSMKKNE |
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| NT seq |
3744 nt +upstreamnt +downstreamnt
atgtttcacgtattctcaaagggcactacacagcagcaggatacgcgtttcagcgacaag
gaaaagaaattgatgaaacaaatgaagttcggggattgcttaaataaacgagtggatatg
tcaaaggtgaagctggatgtgttacgtccatggatcagcaaaaaaattacggatattttg
cacatcgaagatgacgtcgtcgtcgaattcgtctacaatcaattggaggaagaaaaattt
ccctgtcctaagaaaatgcaaattaatatgaccggatttctaaatgggaaaaatgcacga
caatttatgggtgaattatgggcactgttgctatcagctcaagaaagtgaaagtggaata
ccggccgagtttattcaacaaaagaaagatgagatacttaagagagaggagcagcaacgc
caaaatgatcgttcgcgttcacgagatagggatagagagagggatcgagatagagataac
gaacgtgatcgagatcgcgatagacgcagcggtagggatcgttcccatgatggacaacgt
gatgaattaagtcagcgtgagcagcagttaccgccaagtactttaagcgcgatcgagcag
gttaggtcacaattatcagctaaatctagatcgaattcggctgaagatactaatttaggt
agcgtttctcaaagcaaacaaattgaggggggtatcgcagccagtgtaaatgctgccgca
gcagcagcagctgcagctataatacgagatcgttccaggtcaccaaatgctagtgctaga
tcggcagctgcagaagcggccgcaacgaaaatacgtaaccgttctccgcgcaaacgctcc
agggagagatcagtaacgcgaaaatcatcgcgggaacgcaactcatcaccgcaaaggcgt
cgcaattcttcaagggatagacggcgatcatctcgctcgccaaggcgtagatcatcaggt
ggtggcggagatcgacggcgacgacgtagtcgtactcgcagtcgctccagggatcgcagc
ggtcgacgaccaccaagtaagaaacgacaattatcacgttcagcatcaccaccaaaacgt
caaagtccaaaatcaaaaagtcgtcgttccaaagacagacgttcaagatccagatccatt
tctaaatcacccgtaaaacgaaaatcatcgccagcgccaacaagtaatacaaaaaacaga
acttcaccaccttatcgaaagcgttcaacctctcgaaactctaatccccatacacccgta
aatggtcatgaagatggcggtagcgctaaaaaacgtgatgtcaagaaacgatcaccatcc
cgaaatcctagtgaacattcacgcttatccactgaagataagagaccagcgcgcaaacct
tctaaaggtcgctctcgttcaagatctcctagcaagcgatcggttcgaggcgctgcttct
tcacgttcacgttcacgttcaagatcatcatctcgctcctcgagggcatcaatacgctct
aataaaaaaccaatacgtcgctcgagctcacgtaacacaagtctgtcgccgtcacctgat
cgtaaagacgattttgagatacgacgtaataagaatagtgtacaaaagaaacgacactat
cgtcataaccgcgactcatctgcatcatccatcgatagggaacgcgatcgggacggcggc
cgaaggatgatgggagacaatagaggtaggcgaggagatatgcccggtcgacgcttttca
ccgcgtaatcgtagtccgcgcaatgacagtggaggcggacggatgcaacgttcacgttcc
cgtcgtcgttcaaattcacgtaatcgatcaagatctcgcaaccgatcacgttcgcccatg
cgacgttcacgttctccacgacgttttaatcgccgccgttcgccaatgatgcacttccgt
ggacgcggtggaaacaatcgtggccgaatgaacttttggcgtcgtagtcctagcatgggt
cgcggcggtggaggtggtggtcgctttaatcgtcgtttctcgccgcagcgtcggttctca
cgtgatcgcgaccgtgatcggcgtatgtctccgatgcagaatcaattccgcaaattttca
ccgccaccacgacgattctctccacaacaaaatatgccgtatcaaagacgatccagagaa
cggcgatttagcccaggaccacgagatcgtcgaccatcttctccaattagagataattcg
cgtgatcgcggaggtggaaacaatttcggacgctgggatcaaaataatcgcaaccctcct
ccaaaagcaaaatctaggagctcctcagcaagttcgaattgggaattggaagaggaaact
gctgctccaccaccagtagcgcgccagccaagcacaactaaacaaactagtccaattaaa
aacaatggtgaccgcgcaagaagtgctagacgttcccgtgatagaagcgatcgcgactcc
agccaatcatctgagaaaattccaaaggcacgcgaaagcttagttcgccgttcttctgta
gagtttgcaggtccctcagtcaagaccattgatttgtccaaagatgaacgtggtgaaaat
cgcaaagcaaaaccagaagcagtccaaatagaagcccctccagtaaagaaaccagctcct
acagttgcagcagtaactgctgctgctccagttttacgcaatgaaaaattacgcgatcgt
tatagttcgagtttatctcgtacaccgtcaccatttttgaaacctcatgagcgtgaaaag
ctccagccgactgcggtaaagaaaactcaagatagtaaaccacaaaaaagccataaggaa
agttattcatcttcttcggacagctctggcgatagtgatgacagtgaagaagatgaggaa
cgtaatgcgatcgaaaaggtaaaagaaacgaagaagaagaatatagaatcgcgttccaaa
actaaaagacgaaagtcagatacaagcgatgactccgatgatgaaagtgaggaggagaag
tctaagaagaaatccaatgctaaggcactagctaagagtcagacattagtggaattacca
ccgattgcaaagcctggacgaaaagataaaaatctacccactgaagagattcgggaggac
cgaaatgcagttgagctgcaggctagtcgtgcaaaaggcaaacacaacattgacgtacca
gaagtagctgttccaagtagttcaaaagcaaacaagaaattgtcggagaaaaccatttca
aaggataacgtatcgtcaaattcaagcgatgactctgaaaaagaacattctgatggcaaa
aaatccgaagtaaaagcaaaacaagctgtttcgcgaaaacgcacggcgtctatttcgggg
ttgaaaaagtctaagcgcgcagcttcctctgaatccgatgatgagcatgtatcgaagaag
aagcgcaagaaggcaaaaaaatcagcaaaacgaaaatcaacggacgaagatagctcttca
gattccgaggctgaggcgtcgtcgaagaagaaaaagcataagaagcataaaaaacacagc
aagaagagcaagaagcacaagaaacataagaagaagagcaaaaaggctgacagctcctcg
agtagtgacaacgatgacgaggaagttcgagaacgtacaggcaaggcaataacatcagcg
cctttgctgcttggcggagtaaatgaagatttagagaaacaattacgtgagcgggctttg
aaatcgatgaaaaagaatgaatga |
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