Rhagoletis zephyria (snowberry fruit fly): 108367179
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Entry
108367179 CDS
T08513
Name
(RefSeq) septin-interacting protein 1 isoform X1
KO
K13103
tuftelin-interacting protein 11
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rze03041
]
108367179
Spliceosome [BR:
rze03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
108367179
Other components
Complex C specific factors
108367179
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
CDK2AP
RhoGEF
Motif
Other DBs
NCBI-GeneID:
108367179
NCBI-ProteinID:
XP_017477262
LinkDB
All DBs
Position
Unknown
AA seq
848 aa
AA seq
DB search
MSDNEYERFEITDYDLDNEFNPGRRRNLSKNQQIYGIWADDSDNDSADESSSRRGRRGRT
GLGGSSGSKSKDYTAPVSFVAGGIQQAGKKDKKAQKDDAERQITDEESDEEDSRPSFGRK
QVEDADGGSSDSAASSEDERTQHKRAEMGKQQRANNARQTGNSNVGAWEQHTRGIGAKLL
LQMGYKPGMGLGKDLQGISQPVQAHVRKGRGAIGAYGPETAASVGGKGPVVKEDEDVREA
KEFKEKLNKWKKSGDGRQDKGKRYYYRSVEEVIEKGKKGNFMLSEKISKKIGNVPVIDMT
GPEKRVLSGYHALGQTKVADEELYELEQAVASSSLTSKKGSTFALPELMHNLQLIVNLCE
QDIIALDKTEREATDRQAALEHERKNLNEIVQLEKNHIDTLEQALKLVEELTTSNELLTL
QRAEQIFVKLQQDYAAEYKEFALGDLAAGVIAPLVKISLENWKPLQQPTKYVDLIKKWRG
ILESNVDPQNESRNIFDPYSSLVWAGVIPSFRACAASWNPKQHQHMAALLDCWAPLFPTW
ILDSVLEQLVLPQLSNAVRDWDPLTDTVPIHIWILPWNNILGHKMEEFIFPTIREKLAAA
LQAWMPQDRSARAMLTPWKGAFNDTEMQRFLSQHIIPKLQLVLSEFIINPLQQQLELWNQ
VWEWYELLTTQQMAQLLDKYFFPKWMQVLVLWLNQSLDFAEISRWYTGWKSMLTEDILRE
PTIKEHMRRALEIMHRATDVLAPGLATMPAPIITATPPPPPPPTILDIQMTAPAQLEFKE
LVSQKCAERGILFAPMPGRRELGKQVYRVGKLYCYIDRNVCMLSDNSMKNWMPTSVQQIL
DRAITGVM
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgtctgataatgaatatgaacgctttgagattaccgattatgacttggacaacgaattc
aatccgggacgccgtagaaacctttcaaagaatcagcaaatttatggtatttgggccgac
gatagtgataatgatagcgctgatgagtccagcagccggcgtggacgccgaggtcgcacc
ggacttggtggtagtagcggcagcaaatcaaaagactacacagccccggttagttttgta
gccggtggcatacagcaagccggtaagaaagataaaaaagcacagaaagatgatgcggaa
cgacaaattaccgatgaagaaagtgacgaggaagattctcgtccatcttttggtcgtaaa
caagtggaagatgccgatggtggcagtagtgactcggcagccagttctgaggatgaacga
acgcagcataagcgtgctgaaatgggcaaacaacagcgtgctaataatgcccgacaaact
ggtaattcaaatgtaggcgcctgggagcaacacacacgcggtattggcgctaagctacta
ctccagatgggttataaacccggcatggggttgggtaaggatttgcagggtatatcgcaa
ccagtgcaggcgcatgtacgcaaaggacgtggtgctattggtgcctatggtcctgagact
gcagccagcgttggcgggaaagggccggtggtgaaagaagatgaggatgtacgcgaagct
aaagaattcaaagaaaaactaaacaaatggaagaagagtggcgatggacgtcaagataag
ggcaagcgttactactatcgttcggttgaagaggtgatcgaaaagggtaaaaaaggaaac
ttcatgctttcagaaaagataagcaaaaaaattggaaacgtgcccgtcatcgacatgacc
ggaccagaaaagcgtgtacttagcggctaccatgcactgggtcaaacgaaggtagccgac
gaagagctttatgagttggaacaggctgttgcgtctagcagtttaacctcgaagaaaggc
agtacctttgccctgcctgaactgatgcacaatctgcagctaatcgtgaacctctgcgaa
caggatattattgcactcgataaaacagaacgtgaagcaacagatcgccaagctgcgctc
gaacatgagcgaaaaaatctaaatgaaattgtacagctggaaaaaaatcatatcgacacg
ttggagcaagctttaaagctagtagaggagctgaccacgagtaatgaattgttgacactt
caacgtgccgaacaaatttttgtgaaactgcagcaagattatgctgctgagtataaggag
tttgcactgggcgatctagctgctggtgtcatagcaccgttggttaaaatatctttggag
aattggaaaccacttcaacagcccaccaaatatgttgacctaataaagaagtggcgcgga
atattggaatcaaatgtggatccgcaaaacgaatcgcgtaacatatttgatccttactcc
tcgctggtatgggccggagttataccgagctttcgtgcatgtgctgcttcttggaatccc
aaacaacaccaacatatggctgctttgctcgattgctgggcgccactatttccaacgtgg
atactagactctgtgctcgaacagctggtgttgcctcagttaagcaatgctgtacgcgat
tgggatcctctcacagatactgtgcccatacacatttggatattgccatggaacaatata
ttaggccacaaaatggaggaattcatctttccgacgatacgtgaaaaattagcagctgcc
ctacaggcatggatgccacaagatcgttctgcacgggcaatgctcacaccatggaagggt
gctttcaatgataccgaaatgcagcgttttctctcgcaacacatcataccaaaattgcaa
ttggtactaagcgagttcattatcaatccactacaacaacaactcgagctgtggaatcaa
gtatgggagtggtatgaactgctaaccacacagcaaatggcacagctgcttgataaatac
ttcttccccaaatggatgcaagtgttggtactatggttaaatcaatcgcttgactttgcg
gagatatcacgttggtacaccggttggaagagcatgttaactgaggatatattgcgcgag
ccaaccatcaaagagcacatgcgacgtgcgctcgaaataatgcatcgtgctacagatgta
cttgcaccgggacttgcaacaatgcctgcacccataatcactgcaacaccaccaccaccg
ccaccaccaacaattttggatatacaaatgacggcacctgcacaattggagttcaaagag
ttggtatcgcaaaagtgtgccgagcgaggaatactctttgcgccaatgccaggccgaagg
gagttgggaaagcaggtttaccgcgttgggaagctgtactgttatattgatcgtaacgtg
tgtatgttaagcgataacagcatgaaaaactggatgcctacatctgtacaacagatattg
gatcgcgctataactggcgttatgtaa
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