Rhagoletis zephyria (snowberry fruit fly): 108367280
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Entry
108367280 CDS
T08513
Name
(RefSeq) nucleoprotein TPR isoform X1
KO
K09291
nucleoprotein TPR
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108367280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rze03019
]
108367280
Messenger RNA biogenesis [BR:
rze03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108367280
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
DUF4200
Motif
Other DBs
NCBI-GeneID:
108367280
NCBI-ProteinID:
XP_017477357
LinkDB
All DBs
Position
Unknown
AA seq
2412 aa
AA seq
DB search
MDLDGPQLISNILSSEELEQTPPGVQEKLKTWIEEFFDEYCKNKAAANRLHDYEQKLEEL
QATVQDYELKLESQNKNVEELRSQLDSVSSERVQLLEQCRNHEMDMVALRSERNSVAEER
DSLLKLIERQKSELDRLQEEIHSYQQQLKNAITSKCEAIARVDEIESQKVALDFKERRME
QERTMLHNQIRTLTDDLNRNIAELQSIRRDNTMQGMHLEARLAEKTEELKIVQTQCTQYK
ETIDRLTQNIQDLSTKLLNQNEEANKMMDFYKKELEAKTKLAELYKSNCEDTDVERNELS
TAITDLKRMLAEASEQYGELETKFKATLLQHEQELEERGKVIESQKSELKHANDLLKEVQ
NETMESAISKIAPSAAIASRLIRTDMSLTELYSLYVKSSEELDLQKRENARLNLQFKTIL
QELSENAPVIKKQELEYEKLIETNNILAHQRDELLSKKVDMEELMGNAHSKINHLERENK
KLKNSQNDLSRQVCYLLKEVEQLRIGLLSDKGAVQSGNLSTTDDVISKKLVTFTNIVELQ
ENNQKLLLLVRDLSTKLEDAETLKQQMDAAAYQEKIENYAKKFQSMQETLNQQNNTVATL
VSKCERYKKMYFELQKNLQKSGAHSELSDIEDTEMGEIDDTENKNMTNISQSKNRKSMDA
NAERRIRDLEQQLQEVKDQYKTLKEQYEYYTQEKKNNERIMNEQFDSMRTEVRELTSTNC
KLMSSLEYNKEQLKLQQKNISTYKQQITALEDRSKNYENTIIKHEQTVHFLKDEVMKAQH
GHSAAQSEASHLRSENRILKDTVNRLQAEKEGYHRDQQNQNLLLNNLEMIKSNLERSEME
GRARLEQRLDETVRELSAQRRRFQEEEDRFRETTSDLKRQAESAKKCMEEERGQSEKLRK
ELQALREELTNKTNQIDELSKKLQESLTPSKNDNPIALANKKTREFEVKLEEAKIEINSL
SNELAKAREHSDQYFKMSQSAEAEIKSLHEVHTTYTEKTESQINELKSIELNLKSRISEL
EAEVQLASMTEVPNSNQSDQLKKSKEELKDVLQKLSECNRNLRALRTENTSLSESLNAVQ
GKYANEMILHSADIQELTRVKEEMTKIQDQMNALITARDCAKDLYEELKGSHDESLRLLQ
NEKDEMEKRIVDLNGLNSSLHDQIEALTMKLSILSQTQPTNVSSNSLNETAMDTSGTELN
RSRLEDDPKNNDQLLQIIKYLRKEKDLIDAKLDILKAENARLQSENMILQKKLDELKGSL
NQERAKSETLVVSATKHEEILRKIENLNAITDSNRILREERNSLAARVKELNEHINAIEN
DLLPLQNQNRELSTKIEELTSENTSLRTEAIKWRQRANVLVEKSNKNPEEFKRLQTEREN
LAKMLTHEKELMKQTTDELNAIKTEKLQRETEIASLEKQIQTLTEEKKKVSDDYAGVRQN
NVRMLQEIMELRNKLLQKEESLQKLTEEMESKEAQLQDSKNKEFQIRKIAKRYKDSYLEL
SNKTAAASTDGAATAQDNMDLGGNSGAESAVGTAAAATAVTNELEQQRNTIENLNGVIRT
MQEESEKLRKDYDDLKAAVEIDDRTKTLLREAKARIVSLTESKNAISQELNTTKSKLQNV
LQTSENADATINSIKTQYEETLSRLEKELLEQNNQNKEAIVRLSRENESLLMRINQLNRQ
LGQQSAKPSTSSVAITDKGSISESSPRTANVKPMSGSTTVQQSATVTPWRGSETPLASIR
PISVQNSRTAAILPTSQQPAAGGSSTSTSTSSSSTTTVSTGCSNTALVPPQQQVHTTGSS
SIESMSSSPTSSHTDYMPSTSSSASVAVAAIPPMGSTSAAESSQEAESVQQPQQNESQLL
VGGGQPQVVALVSPRVEGSSQNVPSPNLQLQQDPGNQQPSTSGTTSSSTHIAVSSHSRHT
PSSSNVTTSQAGTSGGHKRPRELEGDSSTNVEDSTADKALKHPKRLRGSEPAMLGVTESG
IDVEYQVPTSSQRDQEDDIVVVDSEEEDDGMIEADDGPTDGDAEHEGYEDSYEQDQDMDE
NDIPEVNESNIGVDAEIDNNEVDVDEGTENQAHCTSGTDNQSDVHYNTGASTSHAAAASM
AHSHDMDSHQQSQTISSGSYESNPNATQPATQQWKQTRPQKPTAMLQHQGLTGNVSESGE
QDPSGSRPSDSSGAELVSSPQGSKFGISETGTHSEQHESKMTTNEATEENGAEGEELVGD
RSDENVPVASKSGGSSDAVLAAEEDMDNVEEDFAEDAAAIEVSENADSESHNSSGATQSE
IQDIQQNQVEATSEDNEGADGVSSEGEKQAVEEIEEEGREAEASTSPSITTRSKAIKSTG
NVRRPHRGFHRGGRPTPIIWQDGAGHSRNVSPNHRGQEPPGSPLRGFPNQRSQRARRMRR
PTGGNYGNMRYS
NT seq
7239 nt
NT seq
+upstream
nt +downstream
nt
atggatctcgatggtccgcagttaatttcaaacatcttgtctagcgaagagttggagcag
acgccgcctggggtgcaagagaaattgaaaacttggatagaagagttttttgatgagtac
tgcaaaaataaggctgctgctaatcgacttcacgactatgaacaaaaattagaggagctc
caggcaacagttcaggactatgagcttaaattggagagccagaataaaaatgttgaggag
ctacgctctcagttggacagtgtttctagtgaacgtgtacaattactggaacagtgcaga
aatcatgaaatggatatggttgcacttcgatctgaacgaaattccgtggcagaagaaaga
gactccttgttgaagttaatcgaacgccagaagagtgagctggatagattacaagaagaa
atccactcctatcaacaacaactgaaaaacgctattacttcaaaatgtgaagctattgca
agggtcgatgaaatagaaagtcagaaggtagcgcttgattttaaggagcgccgcatggaa
caggaacgaacaatgcttcataatcagatacgcacacttactgatgatttaaatcgtaat
atagcagaacttcagagcataagacgtgataacacaatgcagggtatgcaccttgaagcc
aggcttgctgaaaaaacagaggaactgaaaatagttcaaactcaatgcacccaatataag
gagacaattgataggcttacacaaaatattcaagatctatccaccaaacttttaaaccaa
aatgaagaagctaacaaaatgatggacttttataaaaaagaactagaagcgaaaacaaaa
ttggctgaattatacaaaagcaattgtgaagacactgatgtagagagaaatgaattaagt
actgctataactgatcttaaacgtatgttggctgaagcaagtgagcagtatggagaacta
gaaacgaaattcaaagctacacttcttcaacacgaacaagaactcgaagaacgcggtaaa
gtgatagagtcacaaaaatcagaactgaaacatgccaatgatttgttaaaggaggtgcaa
aatgaaacaatggagagtgctatatcaaaaattgctccatctgctgcgattgctagtcgc
cttatccgaacggatatgtcccttactgaattatattcattatatgtgaagagttccgag
gaacttgacctacaaaagcgggaaaacgcgcgtcttaatcttcagtttaagacaatattg
caagaattgagcgaaaacgcaccagtgattaaaaagcaagagcttgaatatgagaaactg
atagaaaccaataacattttggcgcatcagcgcgatgaattactaagcaagaaggtagat
atggaagaattaatgggcaacgcacattccaaaattaaccatttagaaagagaaaataaa
aaactaaagaactcacagaacgaccttagccgacaggtttgttatttactaaaggaggta
gagcaattgcgaatcggactcctttcggacaagggcgcggtacagagtggaaatctctca
acaactgatgacgttatatccaaaaaattagtgacctttactaacattgtagagctacag
gagaacaaccaaaagctcttgcttcttgttcgagacctcagcacgaagttggaagatgct
gagaccttgaaacagcaaatggatgccgcagcatatcaagaaaaaattgagaattacgcc
aagaaattccaatcgatgcaagaaacactgaatcaacaaaataataccgttgccactttg
gtatcgaaatgtgagcgttacaaaaaaatgtatttcgaactccagaaaaacttacaaaag
tctggagcgcattcagaactgagtgatatcgaagacactgaaatgggggaaattgatgat
actgaaaataaaaatatgacaaacatatctcaaagtaaaaatagaaagtccatggatgcg
aacgcggaacgtcgcatacgagacttagagcagcagttacaggaagtgaaggaccaatat
aaaacattaaaggagcaatatgaatattatacacaagagaaaaagaataatgaacgtata
atgaatgaacaatttgattcaatgcgcacagaggttagagagttaacatcaacaaattgc
aaactaatgtcgtcgctggaatacaacaaagagcaacttaaattacagcaaaaaaatatt
tcgacctataagcaacaaataactgcgcttgaagatcgtagtaaaaattatgaaaatacc
attataaagcatgaacagacagtgcacttcctaaaagacgaggtcatgaaagcacagcat
ggtcattcagctgcccagagtgaagcttctcacctgcggagtgagaatcgtatcttaaaa
gatacagtgaaccgtttacaagccgaaaaagaaggttatcaccgggaccaacaaaatcaa
aatctacttttaaataacttggaaatgatcaaatccaatttggagcgttctgaaatggaa
ggacgagcacgcttggaacagaggctagacgaaactgttcgtgaattgtctgctcagcgt
cgacgtttccaggaggaagaagatcggttccgagaaacaactagtgaccttaagcggcag
gcagaatctgcaaagaagtgcatggaagaagaaagaggtcagtctgaaaaacttcgaaaa
gaattacaggcgttgcgcgaggagctcactaataagacaaatcaaatcgacgaactcagc
aaaaagctacaagaaagtttaacaccttccaaaaatgacaacccaattgctttggcaaat
aagaaaacacgtgaatttgaagttaaactcgaagaagccaaaattgaaattaattcatta
tcaaatgaattggcaaaggcgcgtgagcattccgatcaatactttaagatgtcacagagt
gctgaagcagaaattaaaagtcttcatgaagtccacactacatacacagaaaaaacagag
tctcaaattaacgaactaaaatcaattgaattgaaccttaagtcaagaatcagcgaactg
gaagcagaagtgcagctcgcgtctatgaccgaagtaccgaattcaaatcaatccgatcaa
ctgaaaaaatccaaagaagagctaaaagatgttctgcagaaattaagcgagtgtaatcgc
aacctgcgtgcgctacgaactgaaaatacatcgctttcggaatcgcttaatgcagtacag
ggaaaatatgccaatgaaatgatactacattcagctgatatacaagaactcacaagagta
aaggaagaaatgacgaaaatacaagaccaaatgaatgccttaattacggcaagggactgc
gctaaggatctatatgaggagctgaagggctcgcatgatgaatcactgcgtttacttcaa
aatgaaaaggacgaaatggaaaagcggatagttgatctgaacggtctcaattcgagtttg
cacgatcaaatcgaagcattgaccatgaagctaagcatacttagtcaaactcaaccaaca
aatgtatcatcaaactctttgaatgaaacagctatggatacctctggtacggaattgaat
cggtcgcgattagaagatgatcccaagaacaatgatcaattattgcaaataattaaatat
ttacgcaaagagaaggatcttatcgacgctaagctagacatattgaaagctgaaaacgct
cgtttgcagtcagagaatatgattctacaaaagaaactcgacgaattaaagggaagtctt
aaccaggagcgcgccaaatctgagacattggtggtttctgccacaaaacatgaggaaatt
ctacgcaagatcgaaaatctaaatgccattaccgatagcaacagaatattgcgcgaggag
cgtaactctttagccgcacgtgtaaaagagctcaacgaacatattaacgctattgaaaat
gatttattgcctttgcagaaccaaaatcgcgagctctccactaaaatcgaagagcttaca
tctgaaaacacatctttacgaacggaagcaattaagtggcgccaacgtgccaatgtattg
gttgaaaagagtaataagaatccggaggagttcaagcgtttacaaacagaacgcgaaaat
cttgctaagatgttaacgcatgagaaggagctgatgaaacagaccaccgatgaattaaac
gccattaagaccgaaaaacttcaacgcgaaaccgagatagcatcgcttgagaagcagatc
caaacactaaccgaagaaaagaagaaagtaagcgatgactacgctggagtgcgtcaaaat
aatgtgcgtatgttgcaggagattatggaactcagaaataagttattgcaaaaggaagag
tctctacaaaaactgaccgaagaaatggaatctaaagaggctcaattgcaagactctaaa
aataaagaattccagattcgtaaaattgctaagcgatataaggactcctacttggagtta
tcaaataaaactgcggctgcttcaacagatggtgcagccacggcgcaggacaacatggat
cttggtggtaacagcggagcagaaagtgctgtgggaaccgcggcagccgcaaccgctgta
actaatgagttggaacagcaacgcaatacaattgagaatctcaatggggtcatacgtact
atgcaagaagaaagtgaaaaacttcgcaaggactatgatgacttaaaagccgccgtagaa
atagatgatcgcaccaagacattattacgtgaagctaaagcgcgtattgtcagtttgact
gagtcgaagaatgcgatcagtcaagagttgaatacaaccaagagtaagttgcaaaacgta
cttcaaacttcagagaatgcagacgcaacgatcaatagcataaagactcaatatgaagaa
acattgtcccgacttgaaaaagaattacttgaacaaaataatcaaaacaaagaagccatc
gtcagacttagcagggaaaatgaatccttgcttatgcgtattaatcaactaaatcgtcaa
cttggccaacaatctgccaagccatccactagttcagtggcaattacagataagggatct
atttcggaatcttcacctagaaccgcaaatgtcaagccgatgtcgggctcaaccactgtg
caacagtcggccacagtaacaccatggcgcggtagtgaaactcctttggccagtattcgc
ccaatatcggtccagaatagtcggaccgctgctatactccctacaagccagcagcccgca
gctggcggctcatcgacatcgacgtccacttcatcgtcaagtaccacaaccgtttcaacc
gggtgcagcaatactgctttagttccaccgcaacaacaagtacatactactggcagcagt
tccattgaatcaatgtcatcatcgccaacttcatcgcacacagattacatgccttctact
agtagctcggcatctgtagcagttgctgcaattccccctatgggctctacatctgcggcc
gaaagctctcaagaagccgagagcgtccagcagccgcaacaaaacgaatcacaattgctt
gttggtggcggacaaccacaggtggtggctctggtttcaccacgcgttgaaggctcttca
caaaatgttccttccccgaatttgcagcttcaacaagatcctggaaatcagcaaccaagc
acttcaggcaccaccagttcgagcacgcacatcgctgttagtagccacagccgccacaca
ccttcaagcagcaacgttaccacatcacaggccggaacgtcgggtggacataaaaggcct
cgtgaactagaaggtgactcatcaacaaatgttgaagacagtactgccgataaagctctt
aaacatccaaagcgcctgcgtggctctgagccagctatgctgggtgtaactgaatccgga
atcgatgttgagtaccaagtaccaacttcatctcaacgcgatcaagaagatgatatagtt
gtggtggattccgaagaagaagacgacggtatgattgaagctgatgacggcccaaccgac
ggcgatgctgagcatgaaggttacgaggactcttatgagcaggatcaagacatggatgag
aatgatattccagaagtaaatgaaagtaacataggtgtagatgcagaaatcgataacaat
gaagtggatgtcgacgaaggaactgaaaaccaggctcattgtacgtcgggtacagacaac
cagtcagatgtacattataacacaggagctagtacaagtcacgcagcagcggcatcaatg
gcacatagtcatgatatggatagtcatcagcagagccaaactatcagtagcggtagttat
gagtccaacccgaatgcaacacaaccggcaactcaacaatggaaacagactcgaccccag
aaacctacggccatgttgcagcatcaaggtttgaccggtaatgtaagtgaaagtggagag
caagatcccagcggaagtcgcccatcagatagtagtggtgcagaactggtgagttcacca
caaggttcgaaatttggaataagtgagacaggaacacactccgaacaacatgagagtaaa
atgactacaaatgaggcgactgaagaaaatggagccgaaggtgaagagcttgtgggtgac
cgtagcgatgagaacgtccctgttgcttcaaaaagtggtggatcaagcgacgctgtgctg
gccgcagaagaggatatggataatgttgaggaagattttgcagaggatgctgctgctata
gaagtttctgaaaatgcagacagcgaaagtcataatagcagtggagctacgcaatctgaa
atacaagatattcagcaaaaccaagtagaagcaacatctgaggataatgaaggcgcagat
ggtgtttcatcggaaggtgaaaaacaagccgtggaggaaatagaagaagaaggacgtgaa
gctgaagcctccacttcaccatctataacgacacgttctaaggctataaagagcacgggt
aatgtacggagaccccatcgtggatttcatcgcggcgggagaccaacgcccataatttgg
caagacggcgctggacactcgcgcaatgtatctcctaatcatcgtggacaagagcctccc
ggtagcccacttcgcggttttccaaaccagcgttcacaacgggcgcgtcgcatgcgtcgt
ccaactggcggaaattacggaaacatgcgttattcataa
DBGET
integrated database retrieval system
