Rhagoletis zephyria (snowberry fruit fly): 108367305
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Entry
108367305 CDS
T08513
Name
(RefSeq) transcription initiation factor TFIID subunit 6 isoform X1
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108367305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rze03021
]
108367305
03036 Chromosome and associated proteins [BR:
rze03036
]
108367305
Transcription machinery [BR:
rze03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
108367305
Coactivators
SAGA/TFTC/STAGA complex
108367305
Chromosome and associated proteins [BR:
rze03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
108367305
STAGA complex
108367305
TFTC complex
108367305
SAGA complex
108367305
SLIK complex
108367305
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
CBFD_NFYB_HMF
Med3
TFIIA
Motif
Other DBs
NCBI-GeneID:
108367305
NCBI-ProteinID:
XP_017477383
LinkDB
All DBs
Position
Unknown
AA seq
617 aa
AA seq
DB search
MSINAGRVAGDMLYGTTLSAESMKVIAESIGVGSLPDDAAKELAEDVSFKIKRIVQDAAK
FMHHSKRERLILGDIDQALKVRNIEPQYGFTANDFIPFRFASGGGRELHFIEEKEMDLND
IVQSSAPKVPLDITLRSHWLVVDGIQPTIPENPPPLSKDSQALESVNPVVKLEQGVTKDA
AGKPATGKIHKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEPRRGEALQSLAS
DPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVRALLDNPSLYLEKYLHELIPSV
TTCIVSKQLCMRPELDNHWALRDFASRLMAMICKTFNTSTNNLQTRVTRIFSKALQNDKT
HLSSLYGAIAGLTEMGAEVVKVFIIPRLKFISERIEPLLLGNQMQSNTDKTAAGHIRAML
QKCCPPVLKQIRRSPDYTEEYRNDYGFMGPALCQAVIKARNAPPSTTTPTPSSISNAPIT
SAAATASTVGRPQVTQISSPVVTAIPQLRAIQHPSQPPQKFVIVSQATTQQAQQPQQAQQ
QQQHPQQQQIPIVHQRPATPQSVLLTTQLNGSGSSGGSVGNSLLNRSDRTSVDSNSIIIE
TEDIRAPPELDDLSHLE
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgagtataaatgctggacgagttgccggtgatatgctgtatggcaccacactctctgcc
gaatcgatgaaagtgatagctgaaagcattggcgttggttcactgcccgatgatgcagct
aaggaattggcggaggatgtaagctttaaaatcaagcgcattgtacaggatgcggccaaa
tttatgcatcattcaaaacgtgagcgattgattttaggcgatattgatcaagcgcttaag
gtgcgcaacattgagccccaatatggcttcactgcaaacgattttataccatttcggttt
gcctcaggtggtggtcgtgaattacattttattgaagaaaaagagatggatttgaatgat
attgttcaaagctctgcaccaaaagttccattggacataacgctacgttctcattggtta
gtggtggatgggatacaaccaacgatcccggagaacccaccaccactatccaaagactcc
caagctttggaatctgttaatccagtggtgaagttggagcagggagttaccaaagatgca
gcgggcaagccagcaacggggaaaatacataagttgcgaaatgtagaaactgtgcatgtt
aaacaattggctacacatgagctgtcagtagaacaacaactctactacaaagagatcacc
gaagcctgtgtaggttcagatgaaccgcgtcgtggagaagcacttcaatcgcttgcctca
gatcctggcttacacgagatgctgccacgtatgtgcaccttcatcgctgaaggtgtaaaa
gtgaatgttgtgcaaaacaacttggcgcttctcatctatctaatgcgtatggtgcgtgcg
ttgctggataatccgtctttatatttagaaaaatatttacatgagctgataccatcagtt
accacttgcattgtttccaaacaactatgtatgcggccagaattagacaatcattgggcg
ttacgcgatttcgcatctcgtttaatggcgatgatatgtaagaccttcaatacatctact
aataacctacaaacgcgtgtaacacgaatattcagcaaagcattgcaaaatgacaagaca
catctatcttccttgtacggagctattgccggactaacggaaatgggcgccgaagtagtt
aaggtgttcataatacctcggttgaaatttatatctgaacgcattgaaccacttctactg
ggtaatcaaatgcagagcaacacagataaaacagcagcgggtcacatacgtgccatgtta
caaaagtgttgtccaccagtcctcaagcagatacgtcggtcgccagattacactgaagaa
tatagaaatgattacggctttatgggaccagcgttgtgtcaggctgtgataaaggcacga
aacgccccaccatcgaccaccacgccaaccccaagtagcatttcgaatgcgcctattaca
tcggcggctgctacagcttcgacagtagggcgaccccaagtgacgcaaatcagtagtccc
gttgttacggctataccacagctgcgcgcaatacaacacccaagtcagccgccacaaaag
tttgtcattgtttcgcaggctactacacaacaagctcaacaacctcaacaagcacaacag
caacagcaacacccacagcaacaacaaatacctattgtacatcaacgaccggcaacccca
caatcggtattgttgaccacacaactaaatggtagcggaagtagtggaggtagtgtgggt
aattcgcttttgaataggagtgatagaacgtcggttgattcaaactcaattattattgag
acggaagatatacgtgctccaccggagttggacgatttatcacatttggaataa
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