Rhagoletis zephyria (snowberry fruit fly): 108367309
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Entry
108367309 CDS
T08513
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze04140
Autophagy - animal
rze04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108367309
04148 Efferocytosis
108367309
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rze04131
]
108367309
Membrane trafficking [BR:
rze04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
108367309
Hops complex
108367309
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
zf-C3H2C3
zf-C3HC4
zf_RING_Vps8
Clathrin
zf-C3HC4_2
zf-RING_16
zf-RING_Vps41
DUF2175
zf-RING_UBOX
zf-RING_2
zf-rbx1
zf-RING_5
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
108367309
NCBI-ProteinID:
XP_017477389
LinkDB
All DBs
Position
Unknown
AA seq
974 aa
AA seq
DB search
MSSFDEDNSWMQYKPSAKFLPVVDGKTADCPAAGTTDYDKLETPIFSKRQITLRIPSNYK
GNLMHAAVNKRWLICVLDTQQTILLRFFLPRALPPGEIALEKYLAGYAISKVFLDYTGHH
TLIPLVPQTPGLSADFLYIHANGPKVRRVEKFKDHEITSVAFNRYMGTESSTGPILLGTS
RGLIFETELVQDGLSPLYRKQVYDLGLGRTKYPITGLELLRLPNTNRFMVIATAPDCIYT
FQENCKSDDRSLQFIFANYVNGQQIHGAEMVETELSYSVLQLYGEPNEKLPKQWAWLCGS
GIRFGEISTEERSTNVLLGDNLISLDYKQYKHLSYEERRQNAPRALALTEYHALLFYSDH
ITGICLLNEKVVYEEFFHEQMGKLLGLMRDPFTGTIYVYTDKMFFNFKITDEQRDIWRIY
LEKGQYDLAEIYAAEQPEHLDTVLTKKADAAFEKGDYNVAADFYAETTKHFEQISLKFMK
LENKRPIIRYVKKRLAMVGNDPDTISVLVVWLIDLYLTQINYPRRSAQERAEWQSEFDEF
MQAARVADCARQNKEAIRNLLKEHADVHNISQFAIANGDYEEVIDQQIGVNKFKDALHTL
TQQDNLELYYKYCPILMEYVPHETIATLMSQGRKLDIKELIPTLIIQESEKHIEEIIRYL
EYAIYKLGETHETVHNYIIHLYAKYKPSKVIIYLENEGQDLSLIHYEINYAMLQCQHFHV
DVATVFLMCLNEMWAAAVELALTFDLKLAKETASKPQLEEDREKMWLVIAQHEIQGTNDV
KKALDLLKECELLRIEDLLPFFSDFEKIDDFKEAICEALRDYNQKILELKHEMDECDKQA
MRVLKDLQNCRARSIRINAQETCNLCETFLLVKPFFVFVCGHKFHSDCIEKQILPTLSRD
QSHQLATLKQQLETLLTQSMPMDNDAAVVQIQRAEIKTEIENMVAADCYFCGVMIEMIDQ
PFVSDWDQVNVDWD
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcttttgatgaagataacagctggatgcaatataagccaagtgcaaagttccta
cctgtggtagatggcaaaactgcagactgtcctgctgctggcacaacagattatgataaa
ctggagacgcccattttcagcaaacgccaaataacgttgcgtataccatcgaactacaaa
ggaaacttaatgcatgcagctgtaaataagagatggttaatttgtgtgctggatacgcag
caaactatattattacgtttctttttgcctagagcgctgcctccaggcgaaattgcattg
gagaagtatttagcgggttacgctatatcaaaagtattcctcgattatactggacaccat
acacttataccattggttccgcagacgcccggtctatcggcagactttctttatatacat
gcgaatgggccaaaagtgaggcgtgtggaaaagttcaaagatcatgaaattacatcggtc
gcatttaaccgttatatgggcacggaatcctctacgggaccaatattgctgggtaccagt
aggggtctgattttcgaaacggaactggtgcaagatggtttgtctcccctgtatcgaaaa
caagtgtacgacttgggtttgggacgtacaaagtatcccataacgggattggagttatta
cgcctacccaatacaaacagatttatggtcattgcaactgcacctgattgcatttacaca
ttccaagagaattgtaaatctgatgatagatctctacagttcatttttgccaattatgta
aatgggcaacaaattcatggtgccgagatggttgaaactgaattgagttattcggtgctg
cagctgtacggagagccaaatgaaaagctgcccaaacaatgggcctggttgtgtggtagc
ggtatacgcttcggagagatatccaccgaagagcgttctaccaatgttttactcggtgac
aatcttatcagcttggattacaagcaatacaaacatctatcctacgaagagcggcggcaa
aatgctccacgagctctagctctaaccgaatatcatgcacttttattctattcggatcac
atcaccggcatttgcctactaaacgaaaaagtggtgtatgaagagtttttccatgagcaa
atgggaaaactacttggtcttatgcgtgatccctttactggcactatttatgtttacacg
gataaaatgtttttcaactttaaaattacagacgaacaacgtgatatttggcgtatatat
ttagaaaagggtcagtatgacttggctgaaatatacgccgctgagcagccagaacattta
gacactgtactaaccaaaaaagcagacgcagcttttgaaaaaggtgattataatgtagcc
gcagatttctatgcggaaacaacaaaacattttgagcaaatcagtttaaaatttatgaaa
ctagaaaataagaggccgatcatacgctacgttaaaaagcgtttagcgatggtgggtaac
gatccagatacgatatcggtgttggtagtatggcttatagatctttatttaacgcaaatc
aattaccctcggcgtagtgcacaggagcgcgctgaatggcaaagtgaatttgacgagttt
atgcaggctgcacgtgtagccgattgtgctcgccaaaataaagaagccatacgtaatcta
ttgaaagaacatgctgatgtacataatatctcacaattcgctatagcgaatggtgattac
gaggaagtgatagaccagcaaattggcgtgaataaatttaaagatgcgctgcacacattg
actcagcaagataacctagaattgtattacaagtattgtcctatactgatggaatatgtg
cctcatgaaacaatagcaacacttatgtcacagggacgaaaattagatataaaagagctc
ataccgacgctgataatacaagaaagtgaaaaacatatagaagaaatcataaggtatctg
gaatatgcgatatacaagttgggtgaaactcatgaaaccgtgcataattacattatacat
ttgtatgccaaatataagccctcaaaagtaataatatacctagagaatgagggacaagac
ttgagtctgattcactacgaaataaattatgcgatgttgcagtgtcagcatttccatgta
gatgtggcgacggtttttctaatgtgtttgaatgaaatgtgggctgccgcggtggagtta
gcactaacttttgatttaaaactggcaaaggaaacggcttcgaaaccacaattagaggag
gaccgcgaaaagatgtggctggttattgcgcaacatgaaatacaaggtaccaatgatgtc
aaaaaagcattagatcttctaaaagaatgtgaattgctgcgtattgaagatttactgccc
tttttctccgatttcgaaaagattgatgattttaaagaagcaatttgcgaggcgctaaga
gattacaaccaaaaaattcttgaacttaaacacgaaatggatgagtgtgacaaacaagcc
atgcgtgtgctcaaagacttgcaaaattgtcgtgcgcgtagtattcgtataaacgcgcaa
gagacttgcaacctttgcgaaacatttctcttagtaaagccattcttcgtttttgtctgt
ggtcacaaatttcatagtgattgtatagaaaaacaaattttacctacattaagcagagat
caaagtcaccaactagccacgcttaaacaacaactggaaacactattgactcaaagtatg
ccaatggataacgacgcagcagttgtgcaaattcaacgcgctgaaataaaaaccgaaatc
gagaatatggttgctgctgattgttatttttgtggtgtaatgattgaaatgatcgatcaa
ccattcgtctccgattgggatcaggtcaatgtcgattgggattaa
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