Rhagoletis zephyria (snowberry fruit fly): 108367513
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Entry
108367513 CDS
T08513
Name
(RefSeq) pinin-like isoform X1
KO
K13114
pinin
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03013
Nucleocytoplasmic transport
rze03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108367513
03015 mRNA surveillance pathway
108367513
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rze03019
]
108367513
03041 Spliceosome [BR:
rze03041
]
108367513
Messenger RNA biogenesis [BR:
rze03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
108367513
Spliceosome [BR:
rze03041
]
Complex C
Other components
EJC/TREX
108367513
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
108367513
NCBI-ProteinID:
XP_017477620
LinkDB
All DBs
Position
Unknown
AA seq
313 aa
AA seq
DB search
MDSSFNKSFHKLQKELEEEKCNLDVLNDSIRRIVGRHRDPGYWLIKAYTYIYAAGPKYGS
GLKHKKIQDDKSVFKRLSIYDEELKPRLSSRVIRELPTREEVLEAQGTDLESRARNRRMF
GSLLGTLHKFCLEESRLKIKEDKKAQIEKKLEEQQLLERETIKKERDFLLTDRKKKQTKI
RILESNLNRLKDFATFERSVTNIRYCIRTKTKPFIYYRPYKLCKKTERLISDTRGFLDSE
LRDQKEQLNFELKEMEREDLNDIDTREKHMKLEFKPSNTSYKIQGEVEFKENKSRNLNEP
ALSSSIIVVKKME
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggactctagtttcaataaatcttttcacaaattacaaaaagagctcgaggaagagaaa
tgcaatttagatgtgcttaatgatagcattcgaaggattgttggtcgccacagagatccg
gggtattggctgattaaagcatatacatacatatacgctgctggaccgaagtatggaagt
ggactaaaacataagaaaattcaagatgacaaatctgtattcaagcgtttgtcgatttac
gacgaagaattgaaaccacgcttaagttctcgggttatacgtgagttgccgactcgtgag
gaagtactggaggcgcaaggaactgatttggagtctagagcgagaaatcgcagaatgttt
gggtctttattgggcactttgcacaagttttgcctagaggaatcaagattaaaaataaaa
gaagacaaaaaagcgcaaattgagaaaaaattagaagaacaacaacttcttgagcgggaa
acaataaaaaaagagcgtgatttccttttgacggaccgaaaaaaaaagcagacaaaaatt
agaattttagaatcaaatttaaatcgtttaaaagattttgccacgtttgagagatcagta
actaacattcgatactgtattagaacaaagacgaagcctttcatttattataggccgtac
aaactttgcaagaaaacagagagacttatcagcgacactcggggttttttggactcagaa
ttgagagaccagaaagagcagcttaactttgaattgaaagaaatggaacgtgaggatcta
aatgatatcgatactcgggaaaaacacatgaaattggaatttaaaccaagtaacacgtca
tataaaattcaaggagaagtggagtttaaagaaaataagtcaaggaacttgaatgagccc
gcgttaagcagcagtataattgtagtaaaaaaaatggaatag
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