Rhagoletis zephyria (snowberry fruit fly): 108367596
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Entry
108367596 CDS
T08513
Name
(RefSeq) probable serine--tRNA ligase, cytoplasmic
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108367596
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rze01007
]
108367596
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rze03016
]
108367596
Enzymes [BR:
rze01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
108367596
Amino acid related enzymes [BR:
rze01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
108367596
Transfer RNA biogenesis [BR:
rze03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
108367596
Prokaryotic type
108367596
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
NOD
VipB
UPF0184
Uds1
Motif
Other DBs
NCBI-GeneID:
108367596
NCBI-ProteinID:
XP_017477737
LinkDB
All DBs
Position
Unknown
AA seq
557 aa
AA seq
DB search
MVLDLDLFREDKGGCPDRIRQNVKSRFDDVEAVEKVISLDTKWRGLRHSLDQLNKAKNKI
SKEYGNKIKLNKQAGGNKGDEAAAPTTPAAANETKTFELAELFEKINEIDASLTLDNLKS
MRQQVEDRTIEVTKELNELEETRDSILREIGNLLHPDVPISNNEDENAIVRKWGDFDFEK
KGFKLLSHIDLIQKIGGMDTDHGADIAGSRGYFLRGPGVFLQQALIQYALRFLADADFIP
LYTPFWMKKPLMAAVAQLNQFDDELYKVVSSKDSEDSEDKYLIATSEQPICAVHRGEWMN
PDSLPIKYAGLSTCFRQEVGAHGRDTRGIFRVHQFEKVEQFIICSPNKSWDHFHEMIANS
EAFYQSLGIPYQVVAIVSGALNNAAAMKYDLEAWFPGSKAFRELVSVSNCTDYQSRRLQI
RFGQSKKMTGQVDYVHMLNGTMCAITRVICVILEVYQTPEGINVPEALAPFLPAKYSKFI
PFTKYREVDEQNEQRKGKKKKTTRSWRLFKSTTEKYHHQLAEPRCNCTLDCSNSNSCSVN
CQIAHRGILTSHGEHSR
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggttctcgatttggatctatttcgtgaagataagggcggatgcccggaccgcattcgc
cagaatgtcaaatcccgttttgatgacgtcgaagccgtcgagaaggtgatcagcctagac
accaagtggcgaggcttgcggcacagcctagatcagctgaacaaggcgaagaataagatc
tccaaggagtacggcaataagattaagctcaacaagcaagcgggaggcaacaagggagac
gaggcggctgctcctactacgccggccgccgccaacgagacgaaaacctttgagctagct
gaactttttgagaagatcaatgaaattgacgccagcctcacgttggacaacttaaagtcg
atgcgccagcaagtggaggacaggacgatcgaagtgacgaaggagctgaacgaactggaa
gagacgcgagattctattttgcgtgaaattggcaacctccttcatcctgatgtgcccatc
tccaataacgaggacgagaacgccatcgttcgcaagtggggcgactttgactttgagaag
aagggcttcaaactgctttcgcacattgacctgatccagaagatcggcggcatggacacc
gatcacggtgctgacattgccggctctaggggctactttctccgcggacccggcgtcttt
ctgcagcaggctctcattcagtacgccctgcgcttcctggctgacgctgactttatcccg
ctgtacactcccttctggatgaagaagccgctgatggcggccgttgctcagctgaaccag
ttcgatgatgagctgtacaaggtggtgtcgagcaaggacagcgaggatagcgaggacaag
tacctgattgccacttcggagcagcccatctgcgcggtgcaccgaggggagtggatgaac
cctgactcgttgccgatcaaatacgccggtctgtcgacctgctttcgccaggaggtgggc
gctcacggccgtgacacgcgaggcatctttcgggtgcaccagtttgagaaggtggagcag
ttcatcatctgctcgccgaacaagtcctgggaccacttccacgagatgatcgccaactcg
gaggccttttaccagtcgctgggcattccctaccaggtggtggccattgtctcgggcgcc
ctgaacaacgccgccgccatgaagtacgacctcgaggcctggttccccggctcgaaggcc
ttccgcgagctggtctctgtctccaactgcaccgactaccagtcgaggcggttgcagatc
cgctttggacagtccaagaagatgaccggccaggtggactacgtgcacatgctgaacggc
acaatgtgcgccatcacccgcgtcatctgcgtcattcttgaggtgtaccagacgcccgag
ggcatcaacgttcccgaggcgctggcgcccttcctcccggcaaagtactccaagtttatt
ccattcaccaagtaccgagaggttgacgagcagaacgagcagaggaaagggaagaagaag
aagactactcgttcatggaggctatttaaatcgacaacagaaaagtatcatcaccagctt
gcggaaccacgctgcaactgtacgctcgactgcagcaacagcaacagttgtagtgtcaac
tgtcaaattgctcatcgtggaatccttacttcacacggcgagcacagtagataa
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