KEGG   Rhagoletis zephyria (snowberry fruit fly): 108367969
Entry
108367969         CDS       T08513                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
rze  Rhagoletis zephyria (snowberry fruit fly)
Brite
KEGG Orthology (KO) [BR:rze00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rze03041]
    108367969
Spliceosome [BR:rze03041]
 Complex B
  Other components
   Complex B specific factors
    108367969
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_EML NBCH_WD40 Beta-prop_WDR90_POC16_2nd LisH_TPL Beta-prop_WDR75_1st Beta-prop_Nup120_160 WDR90_beta-prop_4th Ge1_WD40 Beta-prop_RIG_2nd Beta-prop_Vps41 Beta-prop_DCAF4 Beta-prop_NWD2_C Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_HPS5 WD40_RFWD3 Beta-prop_EIPR1 Beta-prop_WDR19_1st Beta-prop_VPS8 Beta-prop_NUP159_NUP214 Beta-prop_WDR35_TULP_N Beta-prop_SCAP Beta-prop_IP5PC_F Mala_s_1-like VPS8_N TolB_like Beta-prop_WDR11_2nd LisH_WDR26 zf_topless
Other DBs
NCBI-GeneID: 108367969
NCBI-ProteinID: XP_017478176
LinkDB
Position
Unknown
AA seq 509 aa
MSIEIESADVIRLIQQYLKESNLYKTLQTLQEETGVSLNTVDSVDGFVQDIVNGHWDTVL
KVTQSLKLPDKKLLNLYEQIVLELIELRELGAARSLLRQTDPMIMLKQHEPERYIHLENM
LQRAYFDPREAYQEGSSKEKRRAIIAQELSGEVHVVPSSRLLALLGQALKWQQHQGLLPP
GTTIDLFRGKAAMKDQEEEMFPTQMFRQIKFGQKSHVECAQFSPDGQYLITGSVDGFLEV
WNFTTGKIRKDLKYQAQDQFMMMEQAVLALSFSRDSEMVASGSQDGQIKVWRIITGQCLR
KFEKAHTKGITCLQFSRDNSQVLSASFENSIRLHGLKSGKMLKEFKGHTSFVNEATFTPD
GHNILSASSDGTVKIWSLKTTECLSTYKPLGNELAVNTVLILPKNPEHFIVCNRSNTVVI
MNMQGQIVRSFSSGKREGGAFISATISPRGEFIYCAGEDQVLYCFSVTSGKLERTLNVHE
KDVIGLSHHPHQNLLATYSEDGLLKLWKP
NT seq 1530 nt   +upstreamnt  +downstreamnt
atgtctattgaaatcgaatcggctgatgttattcgactaatacagcagtatttaaaagaa
tctaatttatataaaacattgcaaactttacaagaagagaccggtgtctcacttaacacg
gtggacagtgttgacggctttgtacaggacattgtaaatggccattgggacactgtgctg
aaagtcacgcagtccctaaaattacctgataaaaaacttcttaatttgtatgaacaaata
gtacttgaattgattgagttacgagagttgggtgcagcccgttcattgctgagacagact
gatcccatgattatgctgaaacaacacgaaccggagcgctacatacatttagaaaatatg
cttcagcgtgcatattttgatccgagagaagcctaccaagaaggtagcagcaaagaaaaa
cgacgtgccattatagcacaagaactaagcggtgaagtacatgttgtaccatcttcacgt
ctattggcactactaggtcaagcgctgaaatggcagcaacatcaagggctattacccccc
ggcacaacgatcgatttattccggggcaaagcggcaatgaaagatcaagaagaggaaatg
tttcccacacaaatgttccggcaaatcaaatttggtcaaaaatctcatgttgaatgcgcc
cagttttcaccggatggtcaatacctaataactggcagcgttgatggcttccttgaggtt
tggaatttcactactggcaaaatacgcaaagatctgaaataccaagcccaggaccagttt
atgatgatggagcaggcagttttggctttatcattttcccgagactccgaaatggtagca
tctggctctcaagacggacaaattaaagtgtggcgtattataaccggacaatgcttaagg
aaatttgaaaaagcacacacaaaaggaattacatgtttgcagttctcgcgtgataatagt
caagtgctgagtgcttccttcgaaaatagtatacgattacatggcctaaagtctggcaaa
atgctgaaagaattcaaaggtcacacgtcatttgtcaatgaagctactttcacacccgac
ggccataacatactaagcgcctcttcggacggtacagtgaaaatttggtcattaaaaact
actgaatgtttgtcaacctacaaaccattaggcaacgaactagcagtaaacaccgtgtta
atattacccaaaaacccagaacattttattgtttgcaatcgctcgaatacagttgtcatt
atgaatatgcagggtcaaattgtacgttcattctcatctggtaagcgtgaaggaggtgct
ttcatttcagccaccatctccccgcgtggtgaattcatttattgcgctggcgaggatcaa
gtattgtactgcttctcggtaacatctggcaaactggaacgtacgctaaatgtacatgaa
aaagatgtcattggcctatcgcatcatccccaccaaaatttgctagccacgtacagtgaa
gatggactactaaaattatggaagccataa

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