Rhagoletis zephyria (snowberry fruit fly): 108368049
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Entry
108368049 CDS
T08513
Name
(RefSeq) transcription initiation factor TFIID subunit 2
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108368049
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rze01002
]
108368049
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rze03021
]
108368049
03036 Chromosome and associated proteins [BR:
rze03036
]
108368049
Peptidases and inhibitors [BR:
rze01002
]
Metallo peptidases
Family M1
108368049
Transcription machinery [BR:
rze03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
108368049
Coactivators
SAGA/TFTC/STAGA complex
108368049
Chromosome and associated proteins [BR:
rze03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
108368049
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M1
HEAT_2
Coilin_N
Motif
Other DBs
NCBI-GeneID:
108368049
NCBI-ProteinID:
XP_017478285
LinkDB
All DBs
Position
Unknown
AA seq
1230 aa
AA seq
DB search
MDKEPKQESKDVPARPFKLAHQIVSLTGISFERKSIIGAVELTIVPTKENLRLIRLNAKQ
CRIYRILLNDVCEAEFFYFDPFLDICQGDTKVRSLDVYSKNHLAAAQKTDPDVNSGELLI
QIPPEGYHMIQEGRGLRIGIEFSMEDPQGGIHFVIPPTSEDEILPNSAHMFTYAYENSTR
LWFPCVDSFADPCTWKLEFTVDKHLTAVSCGELIEVVMTPDLRRKTFHYSLTTPVCAPNI
ALAVGPFEIYVDPHMHEVTHFCLPQLLPLLKNTVRYLHEAFEFFEETLSTRYPFSCYKQV
FVDELDTDISAYATLSIASVHLMHSIAVIDQTYITRTLMSRAIAEQFFGCFITSHHWSDT
WLAKGIAEYLCGLYSRKCFGNNEYREWVQSELARVVRYEEQYGGIILDCSQPPAPLPVSS
TNPASATSKQTEIVHYFPIKSLHTVSPKYVEAMRRKAHLVIRMLEHRIGQELLIQVFNKQ
LVLATNAAVTKIGSGLWHHLLISTNIFIKAIFTVTGKDMSVFMDQWVRTGGHAKFSFTSV
FNRKRNTIELEIRQDFVNQRGVRKYNGPLLVQLQELDGTFKHMLQIENTVVKADITCHSK
SRRNKKKKIPLCTGEEVDMDLSAMDDSPVLWIRLDPEMILIRDLNIEQPDFQWQYQLRHE
RDVTAQFEAIKALEKYPTNATRSALTDTIENERCFYKVRCEAAHCLTKVANQMVTQWSGP
PAMLNIFRKFFGSFSAPHIIKQNNFANFQLYFLQKVIPVAMAGLRTSHGICPPEVIRFLL
DLFKYNDNTRNHYSDVYYRAALVDALGNSITPVVSVALRGTPITSDSLSADAKLVLEEVT
RLLNMEKNLPSYKYMVSVSCLKVIRKLQKCGHLPSLPKIYRCYAAYGQYLDLRIAAMECL
VDFVKVDGRWEDLDHLITLLETDPDPAARHALAQLLIDNPPFTRESRSSRLDRSELVERL
WSNMNNKLAFDTKLRCDMVDLYHALYATKRPLCLQSADVSNMYKEIIKEGTKKTNTPIST
GSINDVTVTPPPIKEEKDEVVDIVEEKTTITSLKRTATESFEVGNEIIKLETSEEVTLVE
DNAIKVESYENEIKVNVEQEADTSVHSPEPKRLKSEIFEEDDNSVTIIDIGETTITKADS
SFEASKTDAESRHKAEISSKQKKKKKDKKKHKHKHKHKHNKEKERDKERERKDKKDPNIS
RIQAKEATPETLSSADSSNSNSNPPTLNFT
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atggataaggaaccaaagcaagaatctaaagatgtacccgcacggccatttaaattggcg
catcaaattgtgagcttgacgggcatcagtttcgaacggaagagcataataggtgctgtg
gagttaacgattgtgcctacaaaagaaaatttgcggttgataaggttgaatgccaagcag
tgccgcatttatcgaatacttttgaatgatgtgtgcgaggcggagtttttctacttcgat
cccttcttggatatctgtcagggagatacaaaagtacgctcactggatgtgtattccaaa
aatcacttggcagccgcgcagaaaacagacccagacgtcaactccggcgaattattgata
caaattccaccagagggttatcacatgatccaagaaggccgcggtttgcgaataggaata
gaattctcgatggaggaccctcaaggaggcatacatttcgtcattccaccaacaagtgag
gatgaaatactgcccaatagtgcacatatgttcacgtatgcatatgagaattcgacgcgt
ttatggtttccttgtgtcgatagtttcgcagatccttgcacttggaaactcgaatttact
gtggacaaacacttaactgctgtgtcttgcggtgaattaatcgaagttgttatgacacca
gatttgaggcgtaaaacatttcactattcgctaacaacacctgtatgtgctccaaatatc
gcacttgctgttggcccctttgagatctacgtcgatccacacatgcatgaggtcacacat
ttttgtctaccacagctcttaccacttttgaaaaatacagtgcgctacttgcacgaagca
tttgagttttttgaagaaacgctatccacgcgttatcctttctcctgctacaaacaagtt
tttgtagacgagcttgatacagatatcagtgcttatgccacgttgagcatagcttctgtg
catctcatgcattccattgctgtcatcgatcaaacttatataacgcgtacattaatgtcg
cgtgccatagcagaacagttttttggctgtttcattacatcacatcattggtctgatact
tggttggctaaaggcattgctgaatatttgtgtggcctgtattcacgaaagtgttttgga
aacaatgagtatcgggaatgggttcaatcggaattggcgcgtgtagtgcgctatgaagag
cagtatggtggaattatacttgattgtagtcagccaccggctccactaccagtgtcaagt
acgaatcctgcaagtgcgactagcaaacaaactgaaatcgtgcattattttcctatcaaa
agtttacatacggtttcgcctaaatatgtcgaagcaatgaggcgtaaggctcatttggtt
atacgaatgttggaacaccgcatcggacaagagttacttatacaagtttttaataaacaa
ctggtgctggctactaatgcagcggtgacaaaaattggctccggtttatggcatcacttg
cttatttccaccaatatctttatcaaagctattttcactgtaactggcaaggatatgtct
gttttcatggatcagtgggtgcgtactggtgggcacgcgaaattctcttttacttcggtg
ttcaatcgcaaacgtaacacaattgaactagagataagacaagattttgtaaatcaacga
ggcgtccgtaaatataatggacccttactggtacaactacaagaactggacggcacattc
aaacatatgctacagattgaaaatactgtagtgaaggcagatattacttgtcactcgaaa
agccgacgtaataaaaagaaaaaaattccactatgtacgggagaagaagtcgatatggat
ctctctgcaatggatgattcgcctgtactttggattcgtctagacccagaaatgatttta
atacgcgatctaaacatagaacaacccgattttcagtggcaatatcagttgcgccatgag
cgtgatgtgacggcacagtttgaggctataaaagccttagagaaatatccaacaaacgca
acacgttctgcactaacggatacgattgagaatgaacgttgtttttataaagtgcgctgt
gaggcagcacattgccttacgaaagtggccaatcaaatggtgacacaatggagtggccca
ccggcaatgttgaatatcttcaggaaatttttcggctcatttagtgcaccccatataatt
aaacagaataattttgccaattttcagttatactttttacaaaaagttatacctgtcgca
atggccggcctacgcacttcgcatggtatttgtccacccgaagtcatacgctttctcctg
gatctctttaaatacaatgataacacgcgtaatcactactcagatgtttactatcgcgct
gctttagttgatgccttaggaaattccataacacctgttgtttccgtcgctctacgtggc
acaccaattacttcggatagtctttccgcagatgccaaactcgtacttgaagaggtcact
cgtctactcaatatggaaaagaacttaccttcatacaaatatatggtatctgtttcttgt
cttaaagtgatacgaaaactacaaaaatgtggccacttgccttcgctgccgaaaatctat
cgctgctatgctgcttatggccaatatcttgacttacgtatagcggctatggagtgttta
gtggatttcgtaaaagtagatggtcgttgggaagatttagatcatttgattacactgctt
gaaacagatcccgacccagctgcacggcatgcacttgcacaattactaatcgacaatcca
ccatttacgcgtgagtcacgtagtagccgcttagatcggtcagagttggtagagcgattg
tggtcaaatatgaataacaaactggcgttcgatacgaaattacgttgtgatatggtggat
ttatatcatgcgctatatgccacaaaacgtcccttgtgcttacaatcggccgatgtcagc
aacatgtacaaagaaatcattaaagaaggtaccaagaaaaccaacactccaatcagcact
ggctctattaacgacgtcactgtaacgccgcctccaataaaagaagagaaagacgaagtg
gttgatattgtcgaagagaagaccactataacatcactgaaacgcacagctaccgagtcg
tttgaagtaggcaatgaaattatcaaactggaaacaagcgaagaagtaactctggttgag
gataatgcaattaaagtggagtcctacgaaaatgaaataaaagttaatgttgagcaagaa
gctgatacatctgtgcactcacctgagccgaaacgtttgaagagtgaaatcttcgaagag
gatgacaattctgtaacaattatcgatattggcgagacgactataacaaaagcagatagc
agttttgaggcaagtaaaaccgacgccgaaagcagacataaggcggaaatctcatcaaag
caaaaaaagaaaaagaaagacaaaaagaagcacaaacacaagcataagcacaagcacaac
aaggagaaggagcgtgacaaggaacgtgagcgtaaggataaaaaagatcccaacatatcg
cgcatccaagctaaagaagctacgcctgaaaccctcagttcagcagatagtagcaattca
aatagcaatccaccaacgctaaattttacataa
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