Rhagoletis zephyria (snowberry fruit fly): 108368149
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Entry
108368149 CDS
T08513
Name
(RefSeq) tubby-related protein 4
KO
K24720
tubby-related protein 4
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rze04990
]
108368149
Domain-containing proteins not elsewhere classified [BR:
rze04990
]
Other domain-containing proteins
Tubby family proteins
108368149
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR35_TULP_N
Tub
WD40_CDC20-Fz
Beta-prop_WDR19_1st
ANAPC4_WD40
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_ELP1_1st
WD40_Prp19
SOCS_box
Beta-prop_CAF1B_HIR1
Beta-prop_EML
DUF3527
Motif
Other DBs
NCBI-GeneID:
108368149
NCBI-ProteinID:
XP_017478424
LinkDB
All DBs
Position
Unknown
AA seq
1485 aa
AA seq
DB search
MHLHFERNVNTKCDCTILSLSWMGKVPDDIPEEEGWKLNRTNYYQEGWLATGNIRGIVGV
TFTTSHCRRNMDFPLRTNYNLRGHRSDVILVKWNEPYQKLASCDSSGIIFVWIKYEGRWS
IELINDRNTPVTYFSWSHDGRMALICYQDGFVLVGSVAGQRYWSSMLNLESTITCGIWTP
DDQQVYFGTTQGQVIVMDVHGAMVSQVQLCNDVGITSMAWSCEKFKMEEGEESEPGVTNA
SKRSFVLAVSFQNGFIYLLKSFDDVSPAHINTGLSGSLGMVMEWSNSRELLAVAGTSQTS
LNIVDPQGSPLYENLLKFYTESGNILYQTRLPNTSSPVSALTWGHNDKRLFIATGTQVHI
AWVSRRIASLQLLCRLQIQSCIGSERTLPLLPLPSRIRSLIGNLFAQTIRCCVPDLKSLR
EFVSRPPMCSTRLHCTMIRHDDDANQSTGTCYTLYLEYLGGLVPLLKGKRTSKIRPEFVI
FDPQANDSPVFFQYSPEWKSSSGSSQSTTTGQSGRTDSSDSEFEERYRGSPRGQRQRKTR
QKKRQSQSNGDKHSMSTTADQDSLDELAYVDTLPEEEKLVEVTSNIWGTKFKIHGLAKTV
PANLGQVTYKTSLLHLQPRQMTLVITELRDDFPSGPDPSFNPHIFSEDEDEAALLNGGKS
NSNNYGQIPVKNAEAQGKTITSTAQRRLNDSSPPIAPMTPRPNHILARHKNSLNNNATQS
LTMGTGISPLAKAESYDDDSSTESQDVNGHLNGARAAPPTSTLIHATNGSNNSKLMRPKN
ITATTPGIRNSLGPGYSSFKNNYSRSSSNSSCQSRHAISPLYCDGSVPTLQSPKNAVAPT
DIIFERPAVSGTGQTTVMSYSTNTDYTNNVVQVKNALLPELIRSTNSHVNPVPLNLNLNL
ERMDARLKTCASGSNFTTVTNTASTNNTKRRDMLYIDEETQSPTQQPLIPITPLSTTPVE
VRMKRTTTIVSIAPALPDSITRSCSVGYLDSVAITPSDEALMALRRDAPNKRLILVDKRR
TRKKRLNNEDSRKPKLEKSGKSKSLDSCDLVFSQTKLTSKDLEKTTRKLQEIAEGSTSSN
ETNFPANCFKCHRGANPSVLCKQCQTAKLTEADPKKEETIRFVSTPLKKDFSLESMYKDQ
HQQKQIQQQQQRKKGGTPRKKKLDVITSFTDSPLFTRKHRFGIRSKSKETGSSSETNTES
STPLLGRKNENSFSFVKQLTEARWRRKEAQSNLNTVKPPDDHFGQTQGVAINGNAVEVTP
VEAKASVSLQAQALTTLENIISRLRDLDEGRLTPPATPQRLPRSSPASPAASKKNKHQSS
SPIRHILNSPLLNRRYRKKQCLIESSDDEGNGTNGSGEENGGANYNKQYRDLETFQKAQL
LQKLKRGKIEPNGSSIYSNPAPVRREFVMHNKAPMWNEMSQVYQLDFGGRVTQESAKNFQ
IEFRGKQVMQFGRIDGNAYTLDFQYPFSALQAFAVALANVTQRLK
NT seq
4458 nt
NT seq
+upstream
nt +downstream
nt
atgcatctgcatttcgagcgcaatgtgaatacaaaatgtgattgcacaatcctatcgctc
tcatggatgggcaaagttcctgatgacataccagaggaggaaggttggaaattaaatcga
acaaattattaccaagagggatggctggctacaggaaatatacgtggcattgtcggtgta
acatttacaacttcacactgtcgccgaaatatggactttcctctgcgtaccaattacaac
ctgcgtggacatcgatcagatgtaatcttggttaaatggaatgaaccatatcagaaactt
gcatcgtgtgatagctccggtattatatttgtatggataaagtacgaaggacgatggtca
attgaattgatcaacgatcgcaacacaccagttacatatttctcctggtcacacgatgga
cgaatggcactcatatgttatcaagatggcttcgtgctggtcggctccgtagccggtcaa
cgctactggtcgtcaatgctaaatctggaatcaaccattacttgtggcatttggacgcca
gacgatcagcaagtgtactttggcaccacgcagggccaggtgatcgttatggatgtgcat
ggcgcgatggtgtcgcaggtgcagctttgcaatgatgttggcataacatcaatggcatgg
tcgtgtgaaaaattcaaaatggaagagggcgaggaatccgagccaggtgttaccaatgcc
tctaagcgttcttttgttttggctgttagcttccaaaatggttttatctatttgctgaag
tcattcgatgatgtttcgcctgcacatatcaacactgggctaagtggcagcctaggcatg
gttatggaatggagtaattcgcgtgaactacttgctgtcgcgggcacatcgcaaacttcg
ctaaatatagtcgatccgcaaggttcaccgctttatgaaaatcttctaaaattttacaca
gaatctggaaatattttataccagacacgcttaccaaatacctcttcaccggtgtctgcg
ctgacgtggggtcacaacgacaaacgtctatttattgcgaccggcacccaagtgcatatt
gcctgggtatcgagacgtatagcatcacttcagcttttatgtcgcctacaaatacaatct
tgcattggttcggagcgcaccttgccactcttaccgttgccatcacgtattaggagtctg
attggcaatctttttgctcaaacaataagatgctgtgtacctgatttaaaatctttacgc
gagttcgtctcccgaccaccaatgtgttcgacacgtttgcattgcactatgatccgacac
gacgatgacgcgaaccaaagtacgggcacatgctatacactctatttggagtatttgggt
ggtctcgtaccattgcttaaaggaaaacgtacttcaaaaatacgtccagaatttgttata
tttgatccacaagcgaatgattccccagtattttttcaatactcgccggagtggaaaagt
tcatccggatcgagccaatccaccaccaccggacaaagtggaagaactgattcttccgat
agtgagtttgaagaacgatatcgtggctcgccgcgtggtcaacgtcaacgaaaaacacgt
cagaagaaacgccaaagccaaagcaatggtgataagcattcaatgagcaccactgctgat
caggatagcttggatgaactggcatatgttgatacacttcctgaagaggaaaaactggtt
gaggtcacctcaaatatatggggtaccaaatttaaaattcatggacttgctaaaaccgtc
ccagccaatttaggccaagtaacgtataaaacgtccttattacacctgcagccaaggcaa
atgacactagttataactgaattgcgtgatgactttccttcggggccggatccgagtttt
aatccgcacattttctccgaagatgaagatgaagcagctctactcaatggcggcaagagt
aatagcaacaattacggtcaaataccagtgaaaaatgctgaagctcaaggaaaaactata
acatcaacagcccaacgccgcctaaacgattcatctccacccattgcaccgatgacacca
cgacctaatcacatattggcgcgacacaaaaactcattaaataacaatgctacgcagtct
ttgacaatgggtactggcataagccccttagccaaagctgagtcctacgatgatgattcc
tcaactgagtcgcaagatgtaaatggtcacctcaatggcgctagagcagcaccaccaact
agtaccctaattcatgccaccaatggatcaaataacagcaagcttatgcgtccgaaaaat
attactgccaccacgccgggaattcgcaatagtttagggccaggttacagcagctttaaa
aataattacagtcgttctagttcaaattccagctgccagtcacgccacgcaatatcacct
ctgtactgtgacggctcggtaccaacactgcaatcacccaaaaatgccgttgccccaacc
gacataatattcgagcgcccagctgtatcgggtactggtcaaaccacagtaatgtcttat
tcgaccaacaccgattacaccaacaacgttgtacaagtaaaaaacgctttactacccgaa
ttaattcgatctacaaatagtcacgtaaatccggtgccattaaaccttaatttgaacctt
gaacgaatggatgcaagactgaaaacttgtgcgagtggtagtaatttcacaacagttact
aacacggctagcaccaataacactaaacggcgagatatgctatatatagacgaagaaaca
cagtcgcccacgcaacaaccattgatacccatcacgcccttatcgactacacctgtggaa
gttcgcatgaaacgtacaactacgatagtctccatagcaccggctctacccgattcgata
actcgtagttgtagcgttggttatttagattcggttgctataacaccgtccgacgaagct
ttgatggccttgcgaagagacgcacccaataagcgtttaatattagtggacaagcgtcga
accaggaaaaagcggttgaataatgaggattcacgtaaaccaaaactggaaaagtcgggc
aagtcaaaaagtcttgattcctgtgatttagtcttcagtcaaacgaagctcactagcaag
gaccttgagaaaactacacgtaaacttcaagaaatagctgaaggtagcaccagcagcaac
gaaactaacttcccagcaaactgtttcaaatgccatcgtggtgctaatccctccgtgctg
tgcaaacaatgtcagacggccaagctgacggaagccgatccaaaaaaggaagaaacgata
cgttttgtatccaccccactaaagaaagacttctctttagaaagcatgtacaaagatcag
caccaacagaaacaaatacagcagcagcaacaacggaaaaagggcggtacaccgcgaaag
aaaaaattggatgtaatcactagtttcaccgatagtccactgtttacacgaaagcataga
ttcggcatcagaagtaaaagcaaagagacaggcagtagtagtgaaacaaatacggaaagc
tcaacgccacttttgggacgtaaaaatgaaaatagtttcagttttgttaaacaattaaca
gaggcacgctggcgtcgtaaagaggcacaaagtaatttaaatactgttaaacctccggat
gatcatttcggacaaacacagggtgtagccatcaatggaaatgctgttgaagtaacgcct
gtggaagcaaaagcttcagtctcattgcaagcacaggcacttacaaccctagagaatatc
atcagccgtttgcgcgacctcgatgaaggtcgtctcacaccgcctgctacgccacagcgc
ctgccgcgaagctctccagcttcgccagctgccagcaaaaagaacaagcaccaaagtagc
tcccccattcgtcacatactaaattcgcctctgcttaatcggcgatatcgtaaaaaacaa
tgtctcatagaaagttcagatgatgaaggcaatggaacaaatgggtcaggcgaagaaaac
ggcggcgccaattacaataaacaatatcgtgatttggaaacattccaaaaggcacaacta
cttcaaaagctaaaacgtggaaaaatcgagccaaacggttcgtccatctattcaaatcca
gctccagtgagacgagaatttgttatgcataataaagcgccgatgtggaatgagatgagc
caagtgtatcagttggattttggagggcgtgttacacaagaatctgcaaagaattttcaa
attgagtttcgtggtaaacaggttatgcagttcggacgaatcgatggcaacgcatacaca
ctagattttcaatatccgttttccgcattacaagcgttcgctgtcgccttggcaaatgtt
acacaacgtttaaaataa
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