Rhagoletis zephyria (snowberry fruit fly): 108368190
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Entry
108368190 CDS
T08513
Name
(RefSeq) cyclin-H-like
KO
K06634
cyclin H
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03022
Basal transcription factors
rze03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108368190
09124 Replication and repair
03420 Nucleotide excision repair
108368190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rze03021
]
108368190
03400 DNA repair and recombination proteins [BR:
rze03400
]
108368190
Transcription machinery [BR:
rze03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
108368190
DNA repair and recombination proteins [BR:
rze03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
108368190
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cyclin_C_2
Cyclin_N
TFIIB
Cyclin_C
CycT2-like_C
Motif
Other DBs
NCBI-GeneID:
108368190
NCBI-ProteinID:
XP_017478467
LinkDB
All DBs
Position
Unknown
AA seq
325 aa
AA seq
DB search
MFPLSSQKKFWTFSTEQQLNELRLQQNVNYIKAHGAEMDQEQRDSHFLSPSEERILLKQY
ELYLNDFCRRFEPPMPKCVVGTAFHYFKRFYLNNTPMDYHPKEILATCVYLACKVEEFNV
SIGQFVGNIKGDRNKAMDIILSNELLMMQQLNYYLTVHNPYRPVEGFLIDIKTRSNMPNP
ERLRPHIDEFIEKTFFTDACLLYAPSQIALAAVLHAASKEQENLDSYVTENLFVAARDKL
PVLIEAVRKIRFMVKTYELPAKDKVKIIEKKLEKCRNQDNNPDSQIYKERMRKMLFDDDF
DLPLHSSYHVADSSADMSVLNMSQE
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgtttcctttgagctcgcagaagaaattctggactttttcaactgaacaacaacttaat
gaattacgtttgcaacaaaatgttaattacattaaggcacatggtgcggagatggatcag
gaacaacgtgactcccacttcctctcgcccagtgaagaacgtattctactaaagcaatat
gagctctatttaaatgacttttgtcggcggttcgagccacctatgcccaaatgtgttgtt
ggcactgcatttcattatttcaaacgtttctatctgaacaacacaccaatggattatcat
ccaaaggagatactcgccacgtgtgtttatttggcttgtaaagtcgaggaattcaatgta
tcaattggccagttcgtgggcaatataaaaggtgatcgcaataaagcaatggatattata
ctctcaaatgagttgttaatgatgcagcaacttaattactatctaacagtacacaatcca
tataggccagttgaaggtttcctcatagacattaagactcgaagcaatatgccaaatccc
gaacgcttgagaccacatatagatgaatttatagaaaaaacattctttaccgatgcctgc
ctgctatacgcgccatctcagattgctttggcagctgtgctgcatgccgctagtaaagag
caggaaaatttggatagctatgtaacagagaatttatttgtagcggcgcgggataaattg
ccagttctgatagaagctgtgcgcaaaatacgttttatggtaaagacttacgagctgccg
gcgaaggataaagtaaaaattatcgaaaagaaattggaaaaatgtcggaatcaggacaat
aatcccgacagtcaaatctacaaagagcgcatgcgaaaaatgcttttcgacgatgacttc
gacttgccactccactcctcctatcacgttgctgactccagtgcggacatgtctgtgttg
aatatgagccaagaatga
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integrated database retrieval system
