Rhagoletis zephyria (snowberry fruit fly): 108368241
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Entry
108368241 CDS
T08513
Name
(RefSeq) pre-mRNA-splicing factor 38A
KO
K12849
pre-mRNA-splicing factor 38A
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108368241
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rze03041
]
108368241
Spliceosome [BR:
rze03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
108368241
Complex C
U4/U6.U5 tri-SnRNP related factors
108368241
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
108368241
NCBI-ProteinID:
XP_017478541
LinkDB
All DBs
Position
Unknown
AA seq
318 aa
AA seq
DB search
MANRTVKEAKNIHGTNPQYLVEKIIRSRIYDSKYWKEQCFALTAELLVDKAMELRFIGGV
YGGNIKPTQFLCLTLKMLQIQPEKDIVVEFIKNEEFKYVRALGAFYLRLTGSALDCYKYL
EPLYNDNRKLRRQNRAGQYEIVHMDDFIDELLRSDRVCDIILPRIQKRAVLEENNELEPK
VSALDEDLDDDVVSDEDGGGERDHDKNKSSFLPKRRIRKDHSRSRSRSASASRDARGGRS
RDYDTDLEDYGRPRDRERDRFGVSSTSSSSRHWEDRGGGGSSSYRSGRDDYRDEYRREDY
KDRRYDRDSRNERDRRRH
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggccaatcgaactgttaaagaagcaaaaaatattcatggaaccaatcctcaatatctg
gttgaaaaaattatacgctcccgcatttacgattcgaagtattggaaggagcaatgtttt
gcactcactgctgagctgttggtagacaaagcaatggagctgcgattcattggcggtgtt
tacggcggaaatataaaacctacacaattcctttgccttacgcttaaaatgctacaaata
cagcccgaaaaggatatcgttgtggaatttatcaaaaatgaagagttcaaatatgtaagg
gccctgggtgctttttatttgcgtcttacaggaagcgcattggattgttataaatatttg
gaacctctatataatgataatcgtaaacttcgacgccaaaatagggccgggcaatatgaa
attgttcacatggacgatttcatagacgagttgctccgtagtgaccgagtttgtgatata
attctccctcgtatacaaaaacgcgctgtacttgaggaaaataacgagcttgaaccaaaa
gtatcagcgctagacgaggatttggatgacgatgtggtcagtgatgaagacggtggcggg
gaaagggatcatgacaaaaacaaatcgtctttcttacctaagaggagaatacgcaaagat
cattcgcgttcacgttcacgtagtgcttcagcatctcgcgatgcaagaggcggaagatct
cgcgattatgatactgacttagaagactatggtcgtccacgtgatcgtgaaagggataga
tttggtgttagttcgacatcaagcagtagtcgccattgggaagatcgcggcggtggtggc
agctctagttatcgcagtggacgcgatgattatagagacgaatatagaagagaagactat
aaagatagacgttatgaccgtgactcacgaaatgaacgggacagaaggcgtcactaa
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