Rhagoletis zephyria (snowberry fruit fly): 108368283
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Entry
108368283 CDS
T08513
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108368283
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rze03019
]
108368283
03036 Chromosome and associated proteins [BR:
rze03036
]
108368283
Messenger RNA biogenesis [BR:
rze03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108368283
Chromosome and associated proteins [BR:
rze03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
108368283
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
108368283
NCBI-ProteinID:
XP_017478613
LinkDB
All DBs
Position
Unknown
AA seq
2056 aa
AA seq
DB search
MFGGTKPTFGTTTAGTGFGGFSSTTTSSPFGQSAFGKPATSAFGAAPAFGTQQQTPSLFG
ASTAQPQSTGLFGAANTTSAFGSTTTAQPAFGGFQQPTQGASMFGTSQPAANTNSLFGQS
TTSAFGSAVKPGTLGGFGQTAAQPTSSLFGQPAAATNTTSFGSFGQTQPTTSNVFGTGAT
MMMGANAGTSIAKYQPTIGTDTLMKGGQPNNVNTKQHCITAMKEYEGKSLEELRLEDYMA
NRKGPQAGTSGASSGFFGSTTQQAATGTGLFGAAAQPTTGLFGQSAAATTENKGLFGAGA
FGQPNTSAFGATTQQNSFLAKPFGAPATSGFGAATTDSSNLFGAKPAFGQTQPSLFGQTS
TATTAPAFGQAAPGFGGFGAAAPAQQTSLFGAPAADANKPAFGLGTSSAGTTGFGGFGNA
ATSTAGTGLFGSKPATTGFGGAPAFGATSTANTGFTNFSLGNTGGGLFNSSIKPATSGFG
GFGTQTSTAPLNFNPGTAAPSVFGSSAAKPGGLFGSSLGQGATNTAGGLFGGGGAFGTGA
TLGGGFGSSTLGGGNMSLGGLGGSQQQQPAPIHQQILARVTSPYGDNPIFKDLKRTDETD
ATRATNPAAQKAIMESTMSQFKVSTRSSPSVVRVKPITSALTKKSLFEGLEEFDSSVETF
SLKPNAKRLIIKPKPANTIIGTTANTSPNRQPGLQDSSLTNVGQRQTGGLAQSPAPSTLR
NESFSGQIPLDPPPSQVAKSSANIAASTAAQSGRESDIGRRESWLHPNNVEKMRQQNMNN
SIDGAVPLNSTLSELVPRKPLDTYRSTGAGAPGTPTGRPSVSTVQENTFEEQTSRESSRR
EASDHHDETLFSSRSYGGEERSIIEETTGDYEEHPTGITLRRIGYYTIPSLDDLKSYLAE
DGSCIVPNFTVGREGYGNVYFGKEMDVAGLNLDEIVHFRNKEIIIYPDDDNKPPVGSGLN
REAQVTLDQVWPHDKTKHEPIKDPARLADMDWEGKLRRVCDKNDTRFIEYRPETGSWVFR
VKHFSKYGLNDSDEEDEAVPTDPKKAKMGMTGTLGATAVGGGQSAMTNATASDKIXKNDT
RFIEYRPETGSWVFRVKHFSKYGLNDSDEEDEAVPTDPKKAKMGMTGALGATAMGGGQSA
MTNATASDKITMTALKNAQKISEDAARALDPKSLAGGAAHFLPMDESADFMLMDKTQFLQ
ANGNDYSLYEQQQIPRVTSPTAFLAREVGTDSHKLQLMKASFFGDDDFDNKSVTTVEEFE
KNNYYNSNQSRRAGSFAKRVQDVHTSSQSLWKEPGHGAALSDASSQLDFVVQASPLPPSS
SASVMSIMREIDTEASTPALVGDAAAVAQLSKIPQFSVKPKVAGVKVVAHQVPITKSLAF
NLKGRWAADLGLYNFRRFKPTFGPQNTVIVPSTRKNVDHEVQNEHLFDVSAYIFKGRAAN
DYTATILQHVKISSVMHYXHFKESIVTHLELQLRNSLQEDVEGSECPWIKSDNGTDLIVK
HLDEAIKQINLGPLEEYAVSVWSLCLALWGDHEELEGREPTSHFTIMCRRNLLSEWMENT
LTDKDLLTKNVSKHTYLDHLLELVMCHKVTEACELAFRYDDANLALLLSQLSSGPTVRQL
LEDQLAAWHKDEADKFIQLERLKLYMLVAGVALMDSGHGPINTLDGIEWTKVLALQLWYL
SSPTASITDALLAYEKSFKSEEFYSLPPTPCYMDKTCLNEKYALYDLRYHLLQLFSKRSH
PLESLLNPATHTADPMDYRLSWLLLQTLEAIGYRHCSILSESQLHVGFASQLENYDLWEW
ATFVLLHIKDRNQRELSVQNMLYRYVSVSKDVSLSDKEKFVINNLGVPEKWIDYAKAVKA
GAIGNHHLQAKYLLKAKQWALAHEVIFQHIAPDAIINDNLDYLHKLLSQFEGAEANKTIK
VPNWSNQGQIFLDFIDINEKFKSLKTLKTEADIEARWENLKPQLADLCSRINLLPCPTAK
HRLCQSEIAQNLACLVRGVLLVCPVLNPCLIIKIALERLPLPQEFAQQELRALLDTLVDD
LAKVNTSENNEIIMAK
NT seq
6171 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggggaactaaacccacgttcggcaccactactgctggtactggttttggtggc
ttcagcagcacgaccacctcttcacccttcggccaatctgcgtttggaaagccggccacg
tccgccttcggcgctgcaccagcttttggaacacaacagcaaacaccttcattgtttggt
gcaagtactgcccaaccacaatcaacgggcttatttggcgccgcaaacactacttcggcc
ttcgggagtactacaacggcccaacctgcatttggaggtttccagcaaccaactcaaggt
gcatcgatgtttgggacttctcaacccgcagccaatacaaactctctttttggacagtca
acgacatcagcatttgggtccgcagtaaagcccggcacgttaggtggctttggtcagact
gctgcacaaccaacatcttccttgttcgggcagccagcagccgccactaacaccaccagc
tttggttcctttggacagacccagcctactacgagcaatgtgtttggtactggagctacc
atgatgatgggagccaatgcaggcacgtccattgcaaaatatcaacccacaattggcaca
gatacactcatgaaaggtggtcaaccaaataatgttaacaccaaacaacattgtataaca
gcaatgaaagaatatgagggcaaatcactggaagagttacgtttagaagattatatggca
aaccggaaaggaccacaagccggcacctctggcgccagttcgggattctttggctcaacc
actcaacaagcagccacaggtactggactattcggtgcagctgcccaaccaactactgga
ctttttggtcaatcagcggctgcgacaacggaaaacaaaggcttatttggcgctggtgct
tttggacaacctaatacttctgcgttcggtgcaaccacgcagcagaacagctttttggcc
aagccatttggtgctcctgctactagtggctttggtgcagcgacaacagactcgtcaaat
ttatttggcgctaaaccagccttcggacagacgcaaccaagtttgtttggacaaacctca
actgcaaccacagcaccagcatttggtcaggcggcccccggttttggcggctttggcgcg
gcagctcctgcgcaacaaacatcgctcttcggagcgccagctgccgatgccaataaaccg
gcatttgggctaggtacatcatcagcgggaaccactggctttggcggtttcggtaacgca
gcgacaagtactgcgggaacaggactattcggttcgaaacctgccacaactggcttcggt
ggggctcctgcttttggtgcaacttctactgctaataccggttttacaaatttttcgctt
ggaaacaccggtggagggctctttaattcatcgattaagccggccacctctggttttggt
ggatttggaacacaaacttctaccgcaccattgaatttcaatcctggtactgctgcgcct
tcggtttttggtagctctgctgcgaagcctggcggcctgtttggctcgtctctcggccaa
ggcgctacaaacaccgctggcggactttttggtggtggtggggcatttggtacaggtgcc
acacttggtggaggtttcggttcgagtacacttgggggcggtaatatgtcacttggtggc
cttggtggcagccaacaacagcaaccagcaccgattcatcaacaaattctggcaagagta
acctcaccatatggcgataatccgatattcaaagatttgaaaaggaccgacgaaacagat
gccacgcgcgccacaaatcctgcggcacaaaaagccattatggagtcaacaatgagtcaa
tttaaggtatccacccgatccagtccaagcgttgttcgcgtgaaaccaattacaagcgca
cttacgaaaaaatccctcttcgaaggacttgaggagttcgactcgagtgtggagactttc
agtttaaaaccaaatgcgaaacgtctaataataaaacccaagccggccaatacgattatt
ggcactaccgcgaataccagtcctaataggcaacctggattgcaagactcatcattaaca
aacgttgggcaacgccaaacaggtggtctagcacaatcgccggctccgtcgacgctacgt
aacgaatcattctcgggacaaataccgcttgatccaccaccgtcacaggttgctaagtcc
agcgcaaacattgctgcttccactgcggctcaaagtgggcgagagagcgatattggacgg
cgtgaatcttggctgcatcccaataacgtggagaaaatgcgtcaacaaaatatgaataat
agtatcgatggcgctgtgccgcttaacagtacactatcggaattagtgcctcgcaagcct
ctggatacgtatcgctcaacgggcgctggtgcaccgggcactccaaccggtcgaccttct
gtctccaccgtgcaagaaaatacgttcgaggagcaaactagtcgcgaatcatctcgccgc
gaagcatctgatcatcatgatgaaacgttgttctccagtcgttcatacggtggcgaggag
cgctctataatcgaagaaacaacaggagattacgaagaacatcccaccggtataacattg
agacgaatcggttactacacaattccttcattggacgatcttaaatcatatcttgccgag
gacggctcgtgtattgtacccaatttcactgtaggacgcgagggctatggtaatgtttac
ttcggaaaagaaatggacgtggctggattgaacttggatgaaatagtacattttcgtaat
aaggaaattatcatctatcccgacgatgataataaaccgccagttggcagtggtttgaac
cgtgaagcgcaagtaacgttggatcaagtttggccgcacgacaaaaccaagcacgaacct
attaaggatcctgcacgtttggctgatatggattgggaaggaaaattgcgacgagtttgt
gacaaaaatgatacacgcttcattgaatatcgtccggagacgggaagttgggtattccgc
gtaaagcatttctctaaatatggtctcaatgacagtgatgaggaggacgaagctgtgcca
actgatccgaaaaaagcaaaaatgggcatgactgggacactaggtgccacagcagtgggg
ggtggccagagcgcaatgaccaacgcaactgcgtcggataaaatangcaaaaatgataca
cgcttcattgaatatcgtccggagacgggaagttgggtattccgcgtaaagcatttctct
aaatatggcctcaatgacagtgatgaggaggacgaagctgtgccaactgatccgaaaaaa
gcaaaaatgggcatgactggggcacttggtgccacagcaatggggggtggccagagcgca
atgaccaacgcaactgcgtcggataaaataacgatgactgcattgaaaaatgctcaaaag
atctctgaagatgctgctcgagcgctcgatccaaaaagcctcgcagggggagcggcacat
tttttaccaatggatgaatctgcagatttcatgctaatggataagacacaatttctacag
gccaatggaaatgactactccctatacgagcaacaacaaattccgcgtgtgaccagtcca
actgcctttttagctcgagaggttggcactgattctcataagctgcagttaatgaaggct
tcattctttggtgacgatgactttgacaataaatcagttaccactgttgaagaatttgaa
aagaataattattacaatagcaatcaaagtcgccgtgctggttcatttgccaaaagagtt
caagacgtgcacacttcctcgcaatcgctctggaaggagcctggccacggtgctgctctt
tcggacgcatcgagtcaactagattttgttgtgcaggcgtcacctctgccgccctcatct
tctgcttcagttatgagcataatgcgtgaaattgacactgaggcatccactccggcactt
gtcggcgatgcggcagctgtggcacaactctccaaaataccacaattttctgtaaagccg
aaagtggcaggcgttaaggtggtagcacaccaggtgccaattacaaagtcgttggctttt
aatttaaagggtaggtgggcagcagatttgggattatataattttcgccgtttcaagccg
acttttgggccgcagaatactgtaatcgtaccatccacacgcaaaaatgtcgaccatgaa
gtgcaaaatgaacatctcttcgatgtatcggcttacatatttaaaggccgagccgcaaat
gattacaccgccaccatactacaacacgtaaaaatatcttcagtaatgcattatgnacac
ttcaaggagagtattgtaactcacttggaactgcaattgcgtaattcattgcaagaagac
gttgaaggtagtgaatgtccttggataaagtccgacaacggcaccgatttgattgtgaag
catctggatgaagccatcaagcaaattaatcttggcccattggaggaatatgcggtctca
gtgtggtcgctttgcttggctttgtggggcgatcatgaagagcttgagggacgtgagcca
acgtcacacttcacaataatgtgccgccgaaatttactttctgagtggatggagaatacc
ttgaccgataaggacttgttaacgaagaatgtctccaagcacacctatctggatcatttg
ttagaacttgtgatgtgccacaaggtgacggaagcttgcgagttggcctttcgatatgac
gacgcgaatctggcactgttgctgtcacaactttcttcggggcccaccgtgcgtcaactt
ttagaagaccagttggctgcttggcataaggatgaagctgacaaatttatacaattggag
cgcttaaagctatatatgctggtcgccggagttgcgcttatggactcggggcacggtccc
atcaataccttagatggcattgaatggacaaaagtgctagcacttcaactatggtacctt
tcgtcgcccactgcatctattaccgatgcgctattagcctatgaaaaatcttttaaatcg
gaagaattctactctttgccaccaacaccctgctatatggataagacgtgtctgaatgaa
aagtatgcgctctacgacttgcgctaccatttgctgcagttgttctccaaacgtagtcat
ccgctggagagtttgctcaatccagcaactcatacagctgatccgatggattatcgcttg
agttggcttctgcttcaaacattggaggcaattggataccgacactgctcaattttaagt
gaaagccaattgcatgtaggctttgcaagtcagttagaaaattacgatctatgggaatgg
gctacattcgttcttttgcatataaaagaccgtaatcaaagagagttgtcagtgcaaaat
atgctctatcgttatgttagtgtttcaaaagatgtttcattgtcggataaggaaaagttt
gtaataaataatttgggagtaccggagaaatggattgattatgcgaaggcagtgaaggcg
ggcgccattggcaatcatcatttgcaagcgaaatacctgttaaaggcaaagcagtgggca
ttggcacatgaagttatattccagcacattgcacccgatgcaatcattaatgataatctc
gactatttgcacaaattgctgagtcagttcgagggtgccgaggccaacaaaaccataaaa
gtaccgaattggtctaatcaaggacaaatattcttagactttatcgatatcaacgaaaaa
ttcaagagcttaaagacactcaagaccgaggcggatatagaagcacgctgggagaatttg
aagccacaattggctgacttatgttcccgcattaatttgttgccctgccccacggctaaa
catcgcctgtgtcaaagtgaaatcgcgcaaaatttggcttgcctagtgcgcggtgtattg
ctcgtctgtccagtgttgaatccgtgtttgatcataaaaattgcactggaacgtctgcca
ttgccacaagaattcgcgcaacaagagctgcgggcgctgctcgacacattggtcgatgac
ttggccaaagtgaatacgagcgaaaataatgaaataatcatggcaaaatga
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integrated database retrieval system
