KEGG   Rhagoletis zephyria (snowberry fruit fly): 108368549
Entry
108368549         CDS       T08513                                 
Name
(RefSeq) la-related protein 1
  KO
K18757  la-related protein 1
Organism
rze  Rhagoletis zephyria (snowberry fruit fly)
Brite
KEGG Orthology (KO) [BR:rze00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rze03019]
    108368549
Messenger RNA biogenesis [BR:rze03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     108368549
SSDB
Motif
Pfam: LARP1_HEAT La
Other DBs
NCBI-GeneID: 108368549
NCBI-ProteinID: XP_017478907
LinkDB
Position
Unknown
AA seq 1589 aa
MYHMHHQSSSQRFTPTGFVAAVSSTSKIIAGGGDAGASGDAGSTAHKISKQYSSPKATTT
GSSPLEKRVLQPKQHIAQQQQQQQQQQKQHQPQQQQKKVADNTESASARPQANPVADINK
NKSQDIKVVTQDEPSTTTKELNSTTAPAAAASTTIVVPQTDTASTEVVNNGKKVNQKASD
FSNVGDWPMLIGGKPANNESKRSTKHKQRPANAVNKEDNSSSIASGAAATQGNADQTGAP
TSAATGDKPSTSQAQNESSKSGTQSGNGEGSGATATPANTSSGSNGINKKIPKHKWRPLQ
IDLAKSSRPKPIGRPTRRLPNTTSRYQQQQHHYYNQEQHPNAGDQYNGGTETEQRSDWRQ
HAAPSAGNEAPRGGGGERPTRPTSRPTERIDSWRSGSGTERSSAIGGGSVAEREYDRPAR
TQRRFRTSYRGGRQGRGGFARPGPGRASNRIPRHLLASGEYASYLPADAAGVDQSSFVLM
GTHYYGPVPAAYIEMDAQTVKEAIKKQVEYYFSEENLTGDFFLRRKMDPEGCIPVTLIAS
FHRVLALTTDVALIINAIKESEKLEFLEGYKVRTKTNPTMWPIRDVIETTFNPAAQVAAS
NAATSAANSQTPESVNNDIQKNNQQESQNNAAKSGTDNPVSSVPASNNTGGDAGSAAEEA
QPTVIDDNKDVTSSIGAATATPVTNVDAAYASEVLFPPILTSAMATKPLTSIPPPPVPRN
SQNLVSSLLLQQVKQVPSPTVNAENAISALTQKVAEVESGSGAVAQLADHLSGLAESVKM
PTVTSTPQKVQRSGKNNDQQGSTKGSNGGNNIVNAVGNAAGADDATADATEGMWKEVKRR
SKSNALKDTKSSNQQHSTQTLTTQQHTQTIKTVTTNATSATKSSTTTNNNKNLNKIDTKL
NTAKTPLITSNASATSNATNLNNTSNTTNATSTTIINNNNKIPSASSTQSAAAHASATAA
ATVGLSTNTTEKEELDFQFDEELMDPIPATGRINNFTENFSDDDESDYEFADRDINKLLI
VSQVQRAPKHEGYDRTADFTSRTKITQDLENVINDGLANYEEDLWTTSNVGTNYRTVNVI
SQEDFEKLGGGGASGRVQRIYAQQAPPPPPPAYEDEDATLNNTLNSTLNSTLKSRRARFY
AAPSSHSIDPRTPRKRKTRHSSNPPVEAHVGWLLDSVEHRPRTTSMGSSAGTSPTTSSYG
SSVPQSLPVFQHPSHSLLKENNFTQQAYHKYHSRCLKERRRLGYGQSQEMNTLYRFWSFF
LRENFNKTMYNEFRALALEDASNGFRYGLECLFRFFSYGLEKKFRPNVYEDFQDETIADF
EIGQLYGLEKFWAFLKYYKNADKLTVKPKLAEYLKKFKTIEDFRVVEPEINEMLQGVGSL
SRGRNLNRLRSVSESDGTAVVAAGGRKPNTTISNRSDYVGNRPQYQQQQQQHHQQQHNNQ
QSGNYANFSSNRRRTGSFGSGTVRVRSGSLGNKPQVVSRNNNYHYHYGSSPHELRRGGSN
SGLAPHKQQNRQQHQQQKSRQQVQNKDSNNAPGASNVAGPSTLTAAKNEHQHQNYAAAAK
PNKPVINSNNTAPKVTATASEATTTSADK
NT seq 4770 nt   +upstreamnt  +downstreamnt
atgtatcacatgcaccaccagtccagcagtcagaggtttacgccgacaggctttgtggcg
gcggtgtcgtcaacttcaaaaataatcgccggcggcggcgatgccggcgcgtctggagac
gccggctctactgcccataagatatccaaacaatattcaagtcccaaagcaaccacaaca
ggttcgtcgccattagagaaacgtgttttacaacctaaacaacatatagcgcagcagcag
cagcagcagcagcagcagcaaaagcaacaccaacctcaacaacaacagaaaaaagttgcc
gataatacagagagtgcgagtgctcggccgcaagcaaatccagttgctgatatcaacaag
aacaaaagccaagacataaaagtagtaactcaggatgaaccatcaacaacaacaaaagag
ttaaattctacaacagctccggcggcagcagcatcgacaaccatcgttgtgccccaaaca
gacacagcatcgacagaggttgtgaataacggaaagaaggtcaaccaaaaggccagtgat
ttcagcaacgtcggcgattggcctatgctaattggtggcaaacccgcaaataacgaatcg
aaacgttcaacgaaacacaagcagcgtcctgcaaacgcagtcaataaagaagataactca
agctctatcgcaagcggagcagcagcaactcagggaaacgctgatcaaacaggtgcacca
accagtgctgctacaggcgataaaccgtcaacgagccaagcgcaaaatgagtcgagtaag
tctggtacacaatcagggaatggtgaaggtagtggagctactgccacaccagccaacaca
agctcaggatcaaatggcattaataagaagattcccaagcacaagtggcgtcccttgcaa
atcgaccttgccaaatccagccgcccgaaaccgattggacgtcccactagacgcttacca
aacactacgtctcgctatcaacagcagcaacatcactattacaaccaagagcagcaccca
aacgctggtgaccagtataacggcggaaccgaaacagagcagcgcagtgattggcgtcaa
catgccgcacccagcgccggaaatgaagcgccacggggcgggggcggtgaacgtccgacg
cggcccacttcccgccctactgagcgcattgattcctggcgtagcggcagcggcaccgag
cgcagtagtgccatcggtggcggcagcgtcgccgaacgcgaatacgaccgcccagcgcgt
acgcaacggcgcttccggacgtcctaccgtggcggccggcaagggcgcggtggattcgca
agaccgggaccaggtcgtgcgtcaaatcgcataccacgccatctgttagccagtggcgag
tacgcaagctatttgccggcggacgcagccggtgtcgaccagtcctcgtttgtgctcatg
ggcacgcactattatggcccagtgccggcggcctacatcgaaatggacgcacaaacggtc
aaggaggcgatcaagaaacaagttgaatactacttcagcgaagagaatttaactggcgat
ttctttctgcgtcgcaaaatggacccagaaggttgtattccagttacattgattgcttct
tttcatcgcgtcttagctttgactactgacgtggctttgatcattaacgccatcaaggag
tccgagaagctggagtttctcgaaggctataaagtacgcacaaagactaatcccacaatg
tggcccattcgtgatgtgatcgagactacatttaatccagccgctcaggtggctgcttca
aatgcagcaacaagcgcagcgaatagtcaaacaccagagagtgtaaataatgatatacaa
aagaataaccaacaagaaagtcaaaataatgctgccaaatctggcaccgataatccggtt
tcatctgtacccgcaagcaataacaccggcggagatgctggcagcgccgcagaagaggct
caacctactgtaattgatgacaataaggatgtgacaagttcaattggggctgccacagcc
acgcctgtgaccaacgtggatgcggcgtatgccagcgaagtgctcttcccgccgatactt
acctcagctatggccacaaagcctttgactagcatcccgccgccaccagttccacgcaac
tcgcaaaatctagtctcttcgctgttgctgcagcaggtgaagcaagtgccgtcgcccact
gtgaatgcggagaacgcgataagtgcgctcacccagaaagtggccgaggtggaaagtggc
agcggtgctgtggctcaattggcggaccacttgagtggtttggctgaaagcgtgaagatg
ccgacagtgacgtcgaccccacagaaagtgcaaaggagtggcaagaacaatgaccaacaa
ggtagtacgaaaggtagtaacggcggcaacaacattgttaacgctgttggaaacgcggcg
ggggccgatgacgcaacggccgatgccactgagggcatgtggaaagaggtaaagagacgc
tcaaaatcaaatgctttaaaagatactaaatcttccaatcaacaacactcaacacaaacg
ctcacaacacaacaacatacacaaaccattaaaaccgtcaccacaaatgctacctctgca
actaaatcatcgaccaccacaaacaacaacaaaaatctgaacaaaattgatacaaaattg
aacacggcaaaaacaccattgatcacatcgaatgcctccgccacatcgaacgccaccaat
ctaaataacacctccaacaccacgaacgccacatccaccaccatcatcaacaacaacaac
aaaataccttctgcgtcatccactcaatcagcagccgcacacgcttcagctacagcagca
gcaacagttggcctctcgacaaatacaaccgaaaaagaagaactagactttcaatttgac
gaagagcttatggatcccataccagcgactggacgtataaataatttcaccgaaaatttc
tctgacgacgacgagtccgactatgaatttgctgatcgcgatatcaataaactgttgatt
gtgtcgcaagtacaacgagcgcccaaacatgaaggttacgatcgcaccgctgacttcact
tcacgtacgaaaataactcaagacctcgagaatgtgataaacgatggtttagccaattac
gaagaagatctctggaccacatcgaatgtgggcacgaactatcgcacagtaaatgtaata
tcgcaggaagatttcgagaagctgggtggcggcggagccagcggacgtgttcaacgtatt
tatgcacaacaggcaccgccaccaccaccacccgcttacgaagacgaggatgccacgcta
aataataccctcaattccacgctcaattcaacattgaagtcgcgacgtgctcgcttctat
gcggcaccaagctcacattcgatcgacccacgtacaccacgcaagcgcaagacccgccac
tcgtccaatcctcccgtggaggcgcacgtcggttggctgctagactctgtagaacaccga
ccacgcaccacatcgatgggctcctcggcgggcacttcgccgactacctcatcctatggt
tcttccgtgccacagtcattgcccgtctttcaacatccctcacattcgctgcttaaagag
aacaatttcacacagcaagcctatcacaaatatcattcacgctgcttaaaggagcgacgt
cgactaggctatggtcaatcgcaggagatgaacactttatatcgtttctggtcattcttt
ttgcgtgaaaacttcaacaagacaatgtacaatgagttccgagctttggcgctggaagat
gccagcaacggtttccgctatggattagagtgtcttttccgcttcttttcatacggttta
gagaaaaaattccggccaaatgtatatgaggatttccaggacgagacgattgctgacttt
gaaatcggtcaactctatggtcttgagaaattctgggctttcctcaaatactacaagaac
gctgataaactgactgtgaagccaaaattggctgaatacctgaaaaaattcaaaactata
gaagatttccgagttgtcgagccggaaatcaatgaaatgttgcaaggtgtgggaagtctc
agtcgcggtcgtaacttaaatcggctgcgcagtgtctccgagagcgacggcactgcggta
gtcgctgcaggtggtcgaaagcccaacactacaattagcaatcgcagcgattacgtgggt
aatcgaccgcaataccagcagcaacaacaacagcaccaccaacagcagcacaacaatcaa
cagtcaggcaactatgccaatttcagcagcaataggcgacgtaccggttcctttggtagc
ggcactgtgcgcgtacgtagcggttcgttgggtaataaaccacaagtggtatcgcgcaac
aacaactatcattatcactacggtagttcgccgcatgaattacgtcgtgggggtagcaac
tccggcctggcaccgcacaaacagcaaaaccgtcaacaacatcaacagcaaaagtctaga
caacaagtacaaaataaggattccaataatgcgccgggcgcatcgaatgttgccgggcca
agtacattaacagcggcaaaaaatgaacatcaacatcaaaattatgcggcggcagcaaag
ccaaataaaccagtaatcaacagcaataatacagcgccgaaagtcacagccacagcgtcg
gaagcgactacaacgtcagcggataaataa

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