Rhagoletis zephyria (snowberry fruit fly): 108368922
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Entry
108368922 CDS
T08513
Name
(RefSeq) laminin subunit alpha-2
KO
K05637
laminin, alpha 1/2
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze04512
ECM-receptor interaction
rze04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108368922
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
108368922
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Ortholog
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GFIT
Motif
Pfam:
Laminin_G_2
Laminin_EGF
Laminin_G_1
Laminin_B
Laminin_G_3
Laminin_II
DUF4200
Motif
Other DBs
NCBI-GeneID:
108368922
NCBI-ProteinID:
XP_017479379
LinkDB
All DBs
Position
Unknown
AA seq
2196 aa
AA seq
DB search
MLSSFINSHSSRSKIFHRFFFFFCIFSECQCSPIGAIAASCDKRTGQCACLANVTGRRCD
KCKSGHWNLTQGVGCHDCRCDPAGSRSHECNPWTGQCDCKIGVGGQHCNECTDGFYGFST
DGCQRCTQCAGEGQVCDPLNGRCICPPNSRGLGCAQCVAGTWGWQPRLGCRNCACDRIGS
IGQLCEPAHGQCQCREGYAGRQCDTCAIGYFGYPECRRCNCNVDGSFVHADGSITCDANG
QCPCKTLVVGLKCDTCMKSTFGLSALNPEGCTRCFCFGRSSECEQSEWSWGHIRMAEARN
LSVQYIRPQYVTNTEYEYIVVVQMAGAKSYREDAEIHLLNDLNLIPRSTGNVSIGAYTNF
YHPLYFQLPPQFYGDRTSSYGGYLYFTLFIEGANRPLERKVLSRFPLVQIHSHKKLVLDY
YEYENYEYALNVTYKVPLHESEWKYHHNNQPVDRATLMAALQNVRHIFVRASAFADFTEV
VLFNVHMDSAIYVYGSTNMIAKGVEQCKCTKRYDGLSCQDPGKGYYRFRNVTEIETVFIE
DLIGRVVPCHCNGRSNECDRETGVCLNCRDNTGGGHCEQCAEGYYGDPNSPYGCQACPCP
ETSRNFAKGCNVWQGEVSCICKPGYTGKLCDRCRPGYYGNPLAYPNSTCQPCNCNLDGAT
NGDCDSQTGQCQCRPGVAGLKCDRCIAERNYLEERGCRICDNCTLLLLDYIELIGNKLRR
GLHNMDLTGIPAPYLKVEDYERVYNTLQIHYEDYTNARKLLGSYDANELLKIDSHAENNK
FQSRKALATASKRRESTAELRNEVTTLYVDIGALRSDILKYIFTLNNYGKSEQHMSLPMA
LDQARFYLDSIRQHEETVNSIRNSTQCAWHFYYHFGNASDAAFDQKARKARVEMFWRDLN
QTNFRISDMRLHADRTVEMQNEIEDTLEHVVNLRNHVAEDYTKIREVGAEVMDYLNESLI
PRTDIFIEETWAQQEQLSGVTDSIDRLFEQLNISLGDNEGMQREVRKHWLPKAQKHAERL
MERSNEYARQFQPTRNGAKIALLASSAHKNISDAIDAARQASLEANERVSEAQRRLYPND
GSSMIERARISLDRSKMLQKEALDEMESTNALKQKLKIHEDKVESIKATIYDAGTRTNNV
SAHLHAAANNSARKLAMESMEMAKSISEEMRHELQKARRMHEEILKLRAKFAILEPDWEI
KLGRAEENISLTKTNIRLANISLSYVEEQSQKETAKFDEWNNTMASQVQEIRDKIAKARH
AAEGIKISLESLNPKCIRTYQPNTYGLTTSNTIKISFALPNRNGNSPLLHIQGSDGRYIA
LELYKRHVRLLWNLGGTTTIITHPLEVQTRDPKYDDAWYHVEANRTLNIGSLLVRRMNNY
GSLVPGQTVTGNTDAAYTRFFQTHNERIYLGGYPSDMSQKEMQQSAGLNVVVHNVEVDNR
PLGIWNFITSEGRCGGAIIGARESTSISIARHFNGLGYAEVKKSRLRSYRMNLFAVQMTF
KTLDENALLFLAVDDKNNRSVSVTLSRGRIMFRIDYGDESKLEINTTNKYNTGKWVKIEA
AREFVPKRGTENGILRVNNERAITGSPTVPIKSHMLPDLSKPVYYLGGVPPGFKSGTSKA
PGADNPFLGCMKDVQVNRETYDPLGSSSHFGVEASCKEIITKAGFTGQGYIELPSQSLRK
RANTGFVFRTLQPDCLLLLSAYPPEVAEDYDDKDIKGNYSISLIDGHLQVWINSGRSLLK
IISNNTLNDGEFHVVNLIKTGRKFELIVDDELQDTKILSGAPTIVSMPRDAGGLYIGGAP
PYEEFTPLAPTFIKLEGAIRDVVFNNHTVNLNQAVAFSNVQIGRNGPPMGTVNGLIDVLL
KTEPMIGKSFTASPEGCLRVGSYSYEPSAFKFGDISHSYAQLQVPQRNFWQRNFYISFDF
RSFYPNGLIFLAPGSKEKHKHYVALLLKNGQLLLIVRGRRREELKLTAKLDDGEWHHVTI
LCQERKVTMSVEIGQTDQKTSAQMKVPKKIAATNVVYVGGLPEKVPKLPSELLQRLEPFK
GCLRRMSINNSTQDLARPGKHQHVGQCFPKVEKGSYFPGDAYAIYKRNFHVGKYLEFELD
FRTSELFGVLLSISEPSGFPALSLELNNGNIIFSTDLXKSLYIYLEIAPTGTLLTRENFK
GCIRNVSIRQERRDWVDMDELHNVLLSECLVTGVEP
NT seq
6591 nt
NT seq
+upstream
nt +downstream
nt
atgctaagttcattcattaattctcattcatcacgctcgaagatctttcaccgtttcttt
ttcttcttttgcatcttttcagagtgccagtgcagcccgatcggcgccattgctgcctca
tgtgacaagcgtaccggtcaatgcgcctgtctggccaatgttaccggccggcgttgcgac
aaatgcaaatcaggtcattggaacctcacgcaaggcgtcggctgccatgactgtcgttgc
gatccagccggttcgcgcagccacgaatgcaatccatggacggggcaatgtgattgcaag
atcggtgtaggcggccaacattgcaacgagtgtacggacggtttttatggcttctccacg
gacggctgtcagcgttgtacgcagtgcgcgggcgagggacaggtttgtgatccgttgaat
ggtcgctgcatctgtccgccgaacagtcgtgggttgggttgtgcgcaatgtgtggccggt
acatggggttggcaaccgcgtcttggttgtcgcaattgtgcttgcgatcgtatcggttcc
atcggccagctgtgtgagccggcgcacggacagtgccagtgtcgcgaaggctatgcagga
cggcagtgtgacacgtgtgccattggttactttggttatccggagtgcaggcgttgcaat
tgcaatgtagatggttcgtttgtgcacgcagatggctcgattacctgcgatgcgaacggg
cagtgtccgtgcaagacactggtggttggactcaaatgtgacacgtgcatgaagtcgacc
tttggcctgtcggcgctcaacccggaaggttgtacacgttgcttctgctttggccgttcg
agcgagtgtgagcaaagcgaatggtcgtggggacacatacgcatggcggaggcacgcaat
ctgagcgttcagtacatacgaccacagtacgttacgaatacggagtatgagtatattgta
gtggtacagatggcgggcgcaaagagttatcgcgaggatgctgaaatacatctgcttaac
gatctgaatttgataccgcgttctacgggcaacgtgtcgattggcgcctacacgaacttc
tatcatccactctactttcaactgccaccgcaattctatggcgatcgcaccagcagctat
ggtggttacttgtactttacgctgttcattgagggcgccaaccgaccgctggagcgcaag
gtactctcacgctttccgttggtgcaaatacattcgcacaagaagttggtgctcgactat
tacgaatatgagaattacgagtatgcgctgaatgtgacctacaaagtgccgctgcatgag
tccgagtggaagtaccatcacaacaatcagccagtggatcgcgctaccttgatggcggcc
ctgcagaatgtgaggcatatttttgtgcgcgcctcggctttcgcggacttcacggaagta
gttctcttcaacgtccacatggactcagcaatttacgtctacggctctacgaatatgata
gctaaaggcgtagaacaatgcaaatgcacgaaacgttatgatggactctcgtgtcaggat
cctggaaaaggctactaccgttttcgcaatgtcactgaaattgagactgtattcatagag
gatctcatcggacgtgttgtgccatgccattgtaatggacgcagtaatgaatgcgatcgt
gagacgggtgtatgcttgaattgtcgcgataatacagggggtggtcactgcgaacaatgc
gctgagggctattatggtgatcccaactccccatatggctgtcaggcgtgcccctgccca
gagacaagtcggaacttcgccaaaggctgtaacgtttggcaaggcgaggttagttgcatt
tgcaaacccggctacaccggcaagctgtgtgatcgctgccgtcctggctattatggcaat
ccacttgcctatcccaatagcacctgtcagccatgcaattgtaatctggatggcgctact
aatggtgattgcgatagtcagacggggcaatgccaatgtcggccgggtgtggccggtctg
aaatgcgatagatgcatagcagaacgtaattatttagaggaacgcggttgtcgaatttgc
gacaactgcacactgcttctattggactacatcgagctgattggcaataaacttcgccgc
ggtttgcacaatatggatctcactggcataccagcgccctatctgaaagttgaggactac
gagcgcgtctataatacgctccaaattcactacgaagactacacaaatgcgcgtaagctg
ctcggcagctatgatgccaacgagttgctaaagatcgactcacacgctgagaacaataaa
tttcaatcgcgcaaagcgctagccacagcgagtaagcgcagggagtctactgccgaactg
cgcaacgaagtcacaactctttatgttgatataggcgctttgcgttccgatattctgaaa
tatattttcacgctcaacaactatggcaaaagtgagcagcacatgagcctgccgatggct
ttggatcaagcacgcttctatttggactcaatcagacagcacgaggagaccgtgaatagc
atacgcaattccacgcaatgcgcctggcatttttactatcactttggtaacgcttcggat
gcggcattcgatcagaaagctcgcaaagctcgcgttgagatgttttggcgcgacttgaat
caaacgaattttcgcatatccgatatgcgactgcacgccgatcgtacggtagagatgcaa
aacgagatcgaagacacactggagcatgtggtgaatttgcgcaatcatgttgcggaagat
tatactaaaatcagggaagttggcgctgaggtaatggactacttaaatgagagtttgata
ccacgcacggacattttcattgaagaaacctgggcgcaacaagagcaattgagtggtgta
accgattcgattgataggctcttcgaacagttgaatatttcgttgggcgataatgagggt
atgcagcgtgaagtacgcaaacattggctgccaaaagcgcagaagcatgcagagagattg
atggagcgttcgaatgagtacgccagacaatttcagccgacgagaaatggtgcgaaaatc
gcattgttggcgagctctgcgcacaaaaatatttccgatgccatagacgctgcacgccaa
gcctctttagaagcaaacgaacgcgtttcggaggcgcaacgaaggctttaccccaacgac
ggtagctctatgattgaacgtgccaggatttcacttgacagatccaaaatgctgcaaaag
gaagcgctggacgaaatggaaagcacgaatgcccttaagcaaaagctcaaaatacacgaa
gacaaagtagaaagcataaaggcaacgatctatgatgcgggtacgcgcaccaacaatgtc
tcagcacatctgcacgccgctgccaacaactcggcgcgtaagttggctatggagagtatg
gaaatggctaagagcattagcgaagaaatgcgtcacgagctgcaaaaagctagacgcatg
catgaggagattttgaagttgcgtgcaaagtttgccatcttggaaccggattgggaaata
aagctaggcagagctgaggagaatatatcgctcaccaaaaccaatattcgcttagccaac
atttcgctctcttacgtggaagagcaatcacaaaaggagacggcgaaattcgatgaatgg
aataatacaatggccagccaggtgcaggaaatacgcgataaaatcgccaaagcccgacac
gcagccgagggcatcaaaatttccttggaatcactcaatccaaaatgcatacgcacttac
caacctaacacctatgggctcaccacctcgaatactattaaaatatcatttgctttgccc
aaccgtaatggcaactcgccactgttgcacatacagggcagtgatggccgctacattgca
ctggaactctataagcggcacgtgcgtttactttggaatcttggcggcaccaccaccatc
ataacacatccattggaagtgcaaacgcgtgatcctaaatatgatgacgcctggtaccac
gtagaagcgaatcgcacgcttaatatcggcagccttttggtgcgtcgcatgaacaactat
gggtcgcttgtgcctggacaaacggtcactggcaacacagacgctgcctacacgcgtttc
ttccaaacgcacaacgaacgcatatatcttggcggatatccgagtgatatgtcacagaag
gagatgcaacaaagcgccggactcaatgtggttgtgcacaatgtggaggtggataatcgg
ccgctgggtatatggaacttcataacgagcgagggacgttgtggtggtgcaattatcggc
gcgcgagaatcaacgtcgatctcgatagcgcgtcactttaatggtctggggtacgctgag
gtgaaaaagtcgcggctgcgatcgtatagaatgaatttgttcgcggtacaaatgaccttt
aagacgctggacgagaatgcactactatttttggcggttgatgacaagaataatcgctcc
gtctcagtgacgctcagtcgtggtcgcattatgttccgcattgactacggcgacgaatcg
aagttggaaataaataccaccaacaagtacaacaccggcaaatgggttaagattgaggca
gcgcgcgagttcgtgcccaagcgcggcaccgaaaatggcattttgcgcgtgaacaatgag
cgtgccataaccggctcaccaacggtgcccatcaagagtcacatgttacccgatttgtcc
aagcccgtctactatttgggtggcgtgccaccaggcttcaaatcgggcacttctaaggcg
cctggcgcggacaatcccttcttgggctgcatgaaagacgtgcaagtcaacagagaaacc
tacgatccgctcggcagctcctcacacttcggcgtagaggcgtcctgcaaagaaataatt
acgaaagccggcttcacaggtcagggctacatcgaattaccctcacaatcgctacgcaag
cgtgccaacactggttttgtcttccgcactctacagcccgattgcttgctgttactctct
gcctatccgccggaagttgctgaagactacgacgacaaagacatcaaaggcaactattcg
attagtttaatcgatggccacctacaagtatggatcaattctgggcgcagtcttttgaaa
ataatttcaaataacacactaaacgatggtgaattccatgtggtgaatttgataaaaact
ggtcgcaaatttgaattgattgtcgatgatgaattgcaagatacaaagattttgtcgggc
gcgcccacaattgtcagcatgccgcgtgatgctggtggcctgtatattggtggtgcacca
ccctatgaggaatttacgccattggcgccgacatttatcaaattggagggcgctattcgt
gatgtggttttcaataaccacaccgtcaatttaaatcaggcagttgcgttttcgaatgtg
caaatcggacgaaatggtccacctatgggcacagtaaatggactgatcgatgtactgcta
aagactgaaccaatgattggaaagagttttaccgcatcgccagagggttgtttgagggtc
ggcagctattcgtacgagccgagcgccttcaaatttggcgatatctcgcacagttacgcc
caactgcaagtgccacagcgtaatttctggcaacgtaatttctacatttctttcgatttt
cgttccttctacccgaacggtttgattttcctagcaccgggctccaaggagaaacacaag
cactatgtggcgctcctactcaaaaatggtcagctgttgctgattgtgcgcggtcgtcga
cgtgaagaattaaaattgacagccaaattggacgatggcgaatggcatcacgtgacgatt
ttgtgtcaggaacgcaaagttaccatgtctgtggagattggtcagacagatcagaagaca
tcagcacaaatgaaggtgccaaagaagattgccgccacgaatgtggtctacgttggtggt
ttgccggagaaggtgccaaagctgccatcggaattgttgcaacgattagagccattcaag
ggctgcctgcgacgcatgagcatcaataatagtacacaagatctggcgaggcctggtaaa
catcagcatgttggacaatgttttccgaaagtggagaaaggatcttattttcccggtgat
gcctatgcgatttataaacgcaatttccatgttggcaaatacttggaattcgagctggat
tttcgcacctcagaactgttcggtgttctactgagcatctcagagccgtcaggttttcca
gcgttatcgctcgagctcaataatggcaatatcatcttctcaaccgatctcgntaaatct
ctctatatttatttagaaatcgcgcccactggcacgctgctgacgcgcgaaaatttcaaa
ggctgcatacgcaatgtgtccatacgacaggagagacgcgattgggtcgatatggatgag
ttgcataatgtgctgctgagtgaatgtctggtcacaggagtggagccatga
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integrated database retrieval system
