Rhagoletis zephyria (snowberry fruit fly): 108369031
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Entry
108369031 CDS
T08513
Name
(RefSeq) sodium/potassium-transporting ATPase subunit alpha-3-like isoform X1
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108369031
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rze03041
]
108369031
Enzymes [BR:
rze01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
108369031
Spliceosome [BR:
rze03041
]
Complex C
Other components
Step II factors
108369031
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
E1-E2_ATPase
Cation_ATPase_C
Cation_ATPase
OB_NTP_bind
Hydrolase
Cation_ATPase_N
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
HAD
nSTAND3
Hydrolase_3
Flavi_DEAD
T2SSE
SRP54
ATPase
AAA_30
AAA_16
AAA_7
Motif
Other DBs
NCBI-GeneID:
108369031
NCBI-ProteinID:
XP_017479493
LinkDB
All DBs
Position
Unknown
AA seq
1833 aa
AA seq
DB search
MPEEYAQKKEENLKKSRVVQRVSAQQRQINKDNEKWETNRLLLSGVVSKVGDEDEDEDAN
VGRVHLMVHNIVPPFLDGRIVFTKQPEPIVPVKDPTSDFAILARKGSALVRYHREMKERK
KAQKKEWELAGTRLGDIMGIEKPKDEMADGDKADYKNEHRFKDHISENDQLTDREKITQQ
RQFLPAFAVRNELLQVIRDNNIVIVVGETGSGKTTQLTQYLHEEGYTKYGMIGCTQPRRV
AAMSVAKRVADEAGVKLGEEVGYAIRFEDCTSNKTIIKYMTDGILLRESLSEPDLDNYSA
VIMDEAHERSLDTDVLFGILRQVATRRTDIKLIITSATMDASKFAMFFGNVPVFTIPGRT
FPVEVYFSKSPCEDYVDAAVKQTIQIHLGGLEGDILVFMPGQEDIEVTCDVITERLKDLS
EKSQNPIQDLSILPIYSQLPSDLQAKIFQKADNGLRKCIVATNIAETSLTVDGIMFVVDS
GYCKLKVYNPRIGMDALQIYPISQANANQRSGRAGRTGPGCCYRLYTERQYKQELLTNTV
PEIQRTNLANVVLLLKSHGVQDLLQFHFMDPPPEDNMMNSMYQLWILGALDNVGTLTPLG
RSMVEFPLDPAMSKMLLVSTDMRCSAEVLIIVSMLSVPSIFYRPKGREEESDLVREKFQV
PESDHLTLLNVYLQWRINKYSAHWCQQHFLHAKALRKVREVRQQLKEIMDSQRLGVISCG
NEWDCIRKCICSSYFHQAARLKGIGEYVNMRTGMPCHLHPTSALYGMGFTPDYVIYHELV
MTTKEYMQCVTAVDGTWLAELGPMFYSVKESNKSRFERKQEQKDHEKEMEKEMAIKEHMM
QIADVEAKYETNVKTGLGKEQAEQRLTMYGKNQLTPPKQTPEVVKFLKQLAGGFSLLLWF
GAILCLFVYTISCFDEEDPEKDNLYLGVTLIVVVILTGAFAYYQESKSSAIMDSFKDLIP
RKAFVLRDGVLQETDPVYLVLGDIVEVNSGDQVPADILILESSSCKVDNSSITGESEPLQ
RSNQCTHENPLETENIAFFSTYVTEGRARGMVIRTGDSTLIGQIAFLTTGLGSSETSIAL
EIKHFIKLVTLFSSTLGTIFFILSLCIGYNWLEAVIFFIGIIVANVPEGLLATVTVSLTL
TAKSMAKKNCLVKNLQAVETLGSTSIICSDKTGTLTQNRMSVAHVWFGNDTIAIKGLKEA
PKNPKVKAFFANKASGFEDFLRVVTLCNKAKFKPNQKRLPLEKRECTGDASETALFKFVA
SLSVSVNRIRRKYPVVAEIPFNSFNKYYLTVHELANPASKHYQHHKYLVCIKGAPERILN
LCNSILLNGESRDFDAVARRTMGAIFEHLAGKGERVLGFAEMYINNLDSIFEDAGHTKVN
LKTANKFTLLGLMSLIDPARPEVPDAVAKCRQAGIRVFMVTGDHPLTARAIAEGVGIITK
AKEDIVQLDDALLKRIFRLGEGVEGEGEGKAMVVPGDMLSKLSSDHLDYVVRNYMEIVFA
RTSPQQKLMIVQSCQRLGHMVAVTGDGVNDSPALKSANIGIAMGITGSDVSKQAADLILL
DDNFASIIVGIEEGRVIFDNLKKSIAYTLASNYAEIMPFLVYVALGFPLALGTTTILCID
LGTDIFPAISLAYEKAESDIMKQKPRSREDHLVTRRMFNRAYFQIGMIQASAGFMNYFMV
LAASGFFITDLFNLRSVWDNKQYLIVNRYDEAFVSLFDYGKRKKIEGTAQTAYFVSIVVC
QWADLIICKTRRNNICKQGMTNNVLNISLVVETILALFLSYCPGMYILKLFPLYWFNWFV
ALPFAVYIILYDEVRRLMLRHRPGGFFEDVTYF
NT seq
5502 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaagagtatgctcaaaagaaggaggagaatttgaaaaagtcccgcgttgtccaa
cgcgtctcagcccaacaacggcaaatcaacaaagacaatgaaaagtgggaaactaaccgg
ctgctactgtctggcgttgtgagtaaggtcggggacgaagacgaagacgaagatgccaat
gttggtcgcgtccacttgatggttcacaacattgttccgccctttctcgatgggcgaatt
gtgttcaccaaacaacctgaaccaattgtgccagtcaaagatccaacttctgatttcgcc
attctcgcccgaaaaggctccgctctggtgaggtatcatcgagaaatgaaggagcgcaaa
aaagcgcaaaaaaaggagtgggaacttgctggaactcgcctgggtgacatcatgggaatt
gaaaaacccaaagacgagatggctgacggcgataaagctgactacaaaaatgaacaccga
ttcaaggatcacattagcgaaaacgaccagctcactgatcgagaaaagatcacgcaacag
cggcagtttctgcccgcctttgccgtgcgcaatgaactgctgcaggtgatccgcgacaac
aacattgtcatcgtcgtcggcgaaaccggcagtggaaagaccacacagctgacccagtac
ttgcacgaggaaggatacaccaaatacggcatgattgggtgcactcagcccaggcgagtt
gccgccatgtcggtggcaaagcgagtcgccgacgaggccggcgtcaagctgggcgaagag
gtgggctacgccattcgatttgaagactgtacctccaataagaccatcatcaagtacatg
accgacggtattctcctgcgagagtccctctctgagcctgacctcgacaactactccgcc
gtgatcatggacgaggcccatgagcgcagtctcgacactgacgtcctctttggcatcctc
cgccaggtggccacccgccgaactgacattaagctgatcatcacctctgccaccatggac
gcctccaagtttgccatgttcttcggaaacgttccagtgtttaccattccagggcggact
tttcccgtggaggtgtacttctcaaaaagcccctgtgaggactacgttgacgctgctgtc
aagcagacaatccaaattcatctcggcggactggagggcgatattttggtgtttatgccc
ggtcaggaagatattgaagtcacttgcgacgtcataacggaacgtctgaaggatctgtcg
gaaaagtcacaaaacccgattcaagatctatccattctgcccatttactcgcaacttcct
tctgatctgcaggcgaaaatcttccaaaaggccgataatggactgcgaaagtgtatcgtc
gcgacaaacatcgccgagacttcgctcaccgttgatggcatcatgttcgtcgtggacagt
ggctactgcaagctcaaagtgtacaacccccgaatcggcatggacgcactgcagatctat
cccatctcacaggctaatgccaatcagcgaagtggccgtgcaggtcgaaccgggcccggt
tgttgctaccgtctctacaccgagcgacagtacaagcaggagcttctgaccaacacagtg
ccggaaattcagcgaaccaacctggccaacgtggtgctcctcctaaagtcgcacggtgtt
caggacttgctgcagtttcactttatggacccaccgccggaggacaacatgatgaactcg
atgtaccagctgtggatcctgggcgcgctggacaacgtgggcacactcaccccactcggt
cgcagcatggtcgagtttcccctcgatccggccatgtcgaagatgctcctcgtctccact
gacatgcgctgctcggccgaggttctcatcatcgtctcgatgctctccgtgccctccatc
ttctatcgccccaaaggccgcgaagaggagagcgacctagtgcgtgaaaagtttcaggtg
cccgaatctgaccaccttacactgctgaacgtctacctgcagtggcgcatcaacaagtac
tcggcgcactggtgtcagcagcactttctgcacgccaaggcgctgcgcaaggtgcgcgaa
gtgcgccagcagctgaaggagatcatggactcgcagcgactgggcgtcatctcctgcggc
aacgagtgggactgcattcgaaagtgcatctgctcctcctactttcaccaggcggcccgt
ctgaagggcatcggtgagtacgtgaatatgcgcaccggcatgccctgtcacctgcacccc
acttcggccctctacggaatgggcttcacgccggactacgtcatctaccacgaactggtg
atgaccaccaaggagtacatgcagtgcgtgacggcggtcgacggcacctggctggccgaa
ctggggccgatgttctactcggtgaaggagtcgaacaagtcgcgatttgagcggaagcag
gagcagaaggaccacgaaaaggaaatggagaaggagatggccatcaaggagcacatgatg
cagattgccgacgtcgaggcaaagtacgagaccaacgtcaagactggactcggcaaagag
caagctgaacagcgcctgacaatgtacggcaaaaatcagctgacgccaccaaaacaaacg
cccgaagttgtgaaattcctcaagcagttggctggaggcttttctttgcttctctggttt
ggcgccatattatgcctcttcgtgtacaccattagttgcttcgatgaggaggatccagag
aaggacaatctttacctcggcgtgacactcattgtagtggtcatcctcacaggcgccttt
gcctactaccaggaatctaaatcttcagctataatggactccttcaaagatctcattcca
cgaaaggcatttgtcctccgagatggtgtccttcaggagaccgacccagtgtacctggtg
ttgggcgacattgtggaagtcaacagcggagaccaggtgcccgcagatattctcattctt
gagtcttcaagctgcaaagtggacaactcttcgattaccggcgaaagtgagcctttacag
cgaagcaaccagtgcacccatgagaacccgctggagacggagaacattgccttcttctca
acgtacgtcaccgaaggcagagctcgaggcatggtcattcgaaccggtgactcgaccctc
attggccagattgcctttctcaccactggcctgggcagctcggagacctccattgctctg
gagatcaagcacttcatcaaactggtgaccctgttctcctccaccctgggcaccatcttc
ttcattctttccctttgcattggctacaactggctcgaggctgtcatcttcttcatcggc
atcattgtggcgaacgtgcctgaaggcctgctggccacagtcaccgtcagtctgacgctt
accgccaagtccatggcaaagaaaaactgcctggtgaaaaatcttcaagccgtggaaacg
cttggctccacctcaattatctgctctgacaaaacgggcactctgacgcaaaatcgcatg
agcgtcgctcatgtttggttcggaaatgataccatcgccataaaaggacttaaagaggcg
ccaaagaaccccaaagtgaaggcattttttgccaataaggcttccggctttgaagacttt
ctccgagtcgttacgctttgtaacaaggcaaagtttaagccaaaccaaaagcgcttgccc
ttggaaaaaagagagtgcactggagacgcctctgagacggcactcttcaagtttgtcgct
agcctcagcgtcagcgtgaatcgaattcgccgaaagtaccccgtagtagcggagattcca
ttcaactccttcaacaagtactacctgactgtgcacgagttggcaaaccctgcttcaaag
cactaccaacaccacaagtacctcgtctgcatcaagggcgccccagagcgaatcctcaac
ctctgcaactctattctgctgaacggcgagtcgcgtgactttgacgcggtagcccgccgc
acgatgggcgccatctttgagcatctggccggcaagggagaacgggtgctgggttttgct
gagatgtacatcaacaatctcgacagcatcttcgaggacgccggtcacaccaaggtcaac
ttgaagacggccaacaagttcaccctgctgggcctgatgtcgctcattgacccggctcga
ccggaggtgcctgacgccgtggccaagtgtcgccaggcaggcattcgagtgttcatggtg
acgggcgaccacccactgacggcacgtgctatcgccgagggcgtcggcatcatcaccaag
gccaaggaggacatcgttcagctcgacgacgctctactgaagcgcatcttccgtctgggc
gagggcgtggaaggggagggtgagggcaaggccatggtggtgcccggtgacatgctgagc
aagctgagcagcgaccacctagactacgtcgtcaggaactacatggaaattgtctttgct
cgcacctcgccgcagcagaagctgatgattgttcagtcgtgtcagcgtttgggtcacatg
gtcgctgtcactggagacggcgtcaatgactcgccggcgttgaaaagcgccaacatcggc
attgctatgggcatcactggctctgacgtctcaaaacaagccgccgacttgattcttctc
gacgacaactttgcttcgatcatcgtgggcattgaggagggccgtgtcatctttgacaac
ctgaagaagtctattgcgtacaccttggcgtccaactacgcagagatcatgccttttctc
gtctacgtggcgctgggctttccactcgccctgggcaccaccaccattctctgcattgac
ctgggcactgacatctttccggcgatcagtctcgcctatgagaaggccgagtcagacatt
atgaagcagaagccgcgaagtcgtgaggaccacctggtcactcgacgaatgttcaaccgt
gcctactttcagattggcatgatccaggcgtcggctgggttcatgaactacttcatggtc
ttagcggccagtggcttcttcattactgatttgttcaacttgcgctccgtctgggacaat
aagcagtacctcattgtcaatcggtacgatgaagcttttgtaagtttgtttgactatggc
aagagaaagaaaattgaaggcaccgcgcagacggcttactttgtgagcatcgttgtctgt
cagtgggcggacttgatcatctgcaagacacgtcgcaacaacatctgcaagcagggaatg
accaataatgttctcaacattagtctcgtcgttgagaccattctggcactgttcctcagc
tactgcccgggaatgtacattctcaagctattcccgctttattggttcaactggtttgtc
gctctgccattcgcagtgtacattatcctctacgatgaggttcgccgtctgatgttgcgc
caccgaccgggtggcttttttgaagatgtcacctacttctag
DBGET
integrated database retrieval system
